본문 바로가기
KERD
논문KCI 등재

Efficient Isolation and Characterization of a Cellulase Hyperproducing Mutant Strain of Trichoderma reesei

2

조회

0

다운로드

3

인용

0

참고문헌

키워드

주제분류생물학

초록

A cellulase hyperproducing mutant strain, JNDY-13, was obtained using the ARTP mutation system and with Trichoderma reesei RUT-C30 as the parent strain. Whole-genome sequencing of JNDY-13 confirmed that 105 of the 653 SNPs were point mutations, 336 mutations were deletions and 165 were insertions. Moreover, 99 mutations were insertions and duplications. Among all the mutations, the one that occurred in the galactokinase gene might be related to the production of cellulases in T. reesei JNDY-13. Moreover, the up-regulation of cellulase and hemicellulase genes in JNDY-13 might contribute to higher cellulases production. Under optimal conditions, the highest cellulase activity by batch fermentation reached 4.35 U/ml, and the highest activity of fed-batch fermentation achieved was 5.40 U/ml.

Abstract

A cellulase hyperproducing mutant strain, JNDY-13, was obtained using the ARTP mutation system and with Trichoderma reesei RUT-C30 as the parent strain. Whole-genome sequencing of JNDY-13 confirmed that 105 of the 653 SNPs were point mutations, 336 mutations were deletions and 165 were insertions. Moreover, 99 mutations were insertions and duplications. Among all the mutations, the one that occurred in the galactokinase gene might be related to the production of cellulases in T. reesei JNDY-13. Moreover, the up-regulation of cellulase and hemicellulase genes in JNDY-13 might contribute to higher cellulases production. Under optimal conditions, the highest cellulase activity by batch fermentation reached 4.35 U/ml, and the highest activity of fed-batch fermentation achieved was 5.40 U/ml.

참고문헌 (54)

  1. Chang MC, "Harnessing energy from plant biomass", Anal. Biochem., 11, pp.677~684 (2007)
  2. Schuster A, "A versatile toolkit for high-throughput functional genomics with Trichoderma reesei", Biotechn. Biofuels, 5, pp.1~ (2012)[DOI]
  3. Mandels M, "Applications of cellulases", Biochem. Soc. Trans, 13, pp.414~416 (1985)[DOI]
  4. Oksanen T, "Treatment of recycled kraft pulps with Trichoderma reesei hemicellulases and cellulases", J. Biotechnol., 78, pp.39~48 (2000)[DOI]
  5. Mach RL, "Regulation of gene expression in industrial fungi: Trichoderma", Appl. Microbiol. Biotechnol., 60, pp.515~522 (2003)[DOI]
  6. Martinez D, "Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)", Nat. Biotechnol., 26, pp.553~560 (2008)[DOI]
  7. Christian D, "Mutation of the Xylanase regulator 1 causes a glucose blind hydrolase expressing phenotype in industrially used Trichoderma strains", Biotechnol. Biofuels, 6, pp.62~ (2013)[DOI]
  8. Peterson R, "Trichoderma reesei RUT-C30--thirty years of strain improvement", Microbiology, 158, pp.58~68 (2012)[DOI]
  9. Montenecourt BS, "Semiquantitative plate assay for determination of cellulase production by Trichoderma viride", Appl. Environ. Microbiol., 33, pp.178~183 (1977)
  10. Montenecourt BS, "Preparation of mutants of Trichoderma reesei with enhanced cellulase production", Appl. Environ. Microbiol., 34, pp.777~782 (1977)
  11. Montenecourt BS, "Selective screening methods for the isolation of high-yielding cellulase mutants of Trichoderma reesei", Adv. Chem., pp.289~301 (1979)
  12. Crom SL, "Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing", Proc. Natl. Acad. Sci. USA, 106, pp.16151~16156 (2009)[DOI]
  13. Laroussi M, "Low temperature plasma-based sterilization: overview and state-of-the-art", Plasma Process. Polym., 2, pp.391~400 (2005)[DOI]
  14. Zhang X, "Quantitative evaluation of DNA damage and mutation rate by atmospheric and room-temperature plasma (ARTP) and conventional mutagenesis", Appl. Microbiol. Biotechnol., 99, pp.5639~5646 (2015)[DOI]
  15. Fang M, "Rapid mutation of Spirulina platensis by a new mutagenesis system of atmospheric and room temperature plasmas (ARTP) and generation of a mutant library with diverse phenotypes", PLoS One, 8, pp.e77046~ (2013)[DOI]
  16. Li HP, "Studies on the physical characteristics of the radio-frequency atmospheric-pressure glow discharge plasmas for the genome mutation of Methylosinus trichosporium", IEEE T. Plasma Sci., 40, pp.2853~2860 (2012)[DOI]
  17. Lu Y, "Characteristics of hydrogen production of an Enterobacter aerogenes mutant generated by a new atmospheric and room temperature plasma (ARTP)", Biochem. Eng. J., 55, pp.17~22 (2011)[DOI]
  18. Dong XY, "Dielectric barrier discharge plasma as a novel approach for improving 1,3-propanediol production in Klebsiella pneumoniae", Biotechnol. Lett., 32, pp.1245~1250 (2010)[DOI]
  19. Li G, "Genetic effects of radio-frequency, atmospheric-pressure glow discharges with helium", Appl. Phys. Lett., 92, pp.1460~1443 (2008)
  20. Gallo BJ, "Cellulase production by a new mutant strain of Trichoderma reesei MCG77", Biotechnol. Bioeng. Symp., 8 (1978)
  21. Mandels M, "Enzymatic hydrolysis of cellulose: evaluation of cellulase culture filtrates under use conditions", Biotechnol. Bioeng., 23, pp.2009~2026 (1981)[DOI]
  22. Carder JH, "Detection and quantitation of cellulase by Congo red staining of substrates in a cup-plate diffusion assay", Anal. Biochem., 153, pp.75~79 (1986)[DOI]
  23. Ahamed A, "Effect of culture medium composition on Trichoderma reesei's morphology and cellulase production", Bioresour. Technol., 100, pp.5979~5987 (2009)[DOI]
  24. Rapp P, "Formation and location of 1,4-beta-glucanases and 1,4-beta-glucosidases from Penicillium janthinellum", Appl. Environ. Microbiol., 41, pp.857~866 (1981)
  25. Kowalski ZE, "A high performance liquid chromatographic method for the fluorimetric determination of lactose, galactose and glucose in normal and abnormal milk of cows", Onderstepoort J. Vet. Res., 53, pp.225~229 (1986)
  26. IUPAC, "Measurement of cellulase activities", Pure Appl. Chem., 59, pp.257~268 (1987)[DOI]
  27. Fekete E, "Regulation of formation of the intracellular beta-galactosidase activity of Aspergillus nidulans", Arch. Microbiol., 179, pp.7~14 (2002)[DOI]
  28. Nagy Z, "<TEX>${\beta}$<", TEX>-Galactosidase of Penicillium chrysogenum: production, purification, and characterization of the enzyme, 2001, pp.21, 24~
  29. Li Y, "Overproduction of cellulase by Trichoderma reesei RUT C30 through batch-feeding of synthesized low-cost sugar mixture", Bioresour. Technol., 216, pp.503~510 (2016)[DOI]
  30. Ivanova C, "Genome sequencing and transcriptome analysis of Trichoderma reesei QM9978 strain reveals a distal chromosome translocation to be responsible for loss of vib1 expression and loss of cellulase induction", Biotechnol. Biofuels, 10, pp.209~ (2017)[DOI]
  31. Kong X, "Efficient acetone-butanol-ethanol (ABE) production by a butanol-tolerant mutant of Clostridium beijerinckii in a fermentation-pervaporation coupled process", Biochem. Eng. J., 105, pp.90~96 (2016)[DOI]
  32. Mane SP, "Analysis of high-throughput sequencing data", Methods Mol. Biol., 678, pp.1~11 (2011)
  33. Seiboth B, "The galactokinase of Hypocrea jecorina is essential for cellulase induction by lactose but dispensable for growth on D-galactose", Mol. Microbiol., 51, pp.1015~1025 (2004)[DOI]
  34. Foreman PK, "Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei", J. Biol. Chem., 278, pp.31988~31997 (2003)[DOI]
  35. Martinez D, "Corrigendum: Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)", Nat. Biotechnol., 26, pp.553~560 (2008)[DOI]
  36. Li C, "Effect of pH on cellulase production and morphology of Trichoderma reesei and the application in cellulosic material hydrolysis", J. Biotechnol., 168, pp.470~477 (2013)[DOI]
  37. Genichi, "System of experimental design: engineering methods to optimize quality and minimize costs" (1982)
  38. Zhao Y, "Orthogonal optimization of Carboxydothermus hydrogenoformans culture medium for hydrogen production from carbon monoxide by biological water-gas shift reaction", Int. J. Hydrogen Energ., 36, pp.10655~10665 (2011)[DOI]
  39. Callow NV, "Nutrient control for stationary phase cellulase production in Trichoderma reesei Rut C-30", Enzyme Microb. Technol., 82, pp.8~14 (2016)[DOI]
  40. Ahamed A, "Culture-based strategies to enhance cellulase enzyme production from Trichoderma reesei RUT-C30 in bioreactor culture conditions", Biochem. Eng. J., 40, pp.399~407 (2008)[DOI]
  41. Bhat MK, "Cellulose degrading enzymes and their potential industrial applications", Biotechnol. Adv., 15, pp.583~620 (1997)[DOI]
  42. Fritscher C, "Cellobiose metabolism and cellobiohydrolase I biosynthesis by Trichoderma reesei", Exp. Mycol., 14, pp.405~415 (1990)[DOI]
  43. Morikawa Y, "Cellulase induction by lactose in Trichoderma reesei PC-3-7", Appl. Microbiol. Biotechnol., 44, pp.106~111 (1995)[DOI]
  44. Muthuvelayudham R, "Triggering of cellulase protein production using cellulose with lactose by Trichoderma reesei", Asian J. Microbiol. Biotechnol. Environ. Sci., 8, pp.249~251 (2006)
  45. Seiboth B, "The galactokinase of Hypocrea jecorina is essential for cellulase induction by lactose but dispensable for growth on D-galactose", Mol. Microbiol., 51, pp.1015~1025 (2004)[DOI]
  46. Hartl L, "Induction of the gal pathway and cellulase genes involves no transcriptional inducer function of the galactokinase in Hypocrea jecorina", J. Biol. Chem., 282, pp.18654~18659 (2007)[DOI]
  47. Kubicek CP, "Metabolic engineering strategies for the improvement of cellulase production by Hypocrea jecorina", Biotechnol. Biofuels, 2, pp.19~ (2009)[DOI]
  48. Stricker AR, "Xyr1 (Xylanase Regulator 1) regulates both the hydrolytic enzyme system and d-xylose metabolism in Hypocrea jecorina", Eukaryot. Cell, 5, pp.2128~2137 (2006)[DOI]
  49. Ilmen M, "The glucose repressor gene cre1 of Trichoderma: isolation and expression of a full-length and a truncated mutant form", Mol. Gen. Genet., 251, pp.451~460 (1996)
  50. Zeilinger S, "Nucleosome transactions on the Hypocrea jecorina (Trichoderma reesei) cellulase promoter cbh2 associated with cellulase induction", Mol. Genet. Genomics, 270, pp.46~55 (2003)[DOI]
  51. Schmidtdannert C, "Directed evolution of industrial enzymes", Trends Biotechnol., 17, pp.135~136 (1999)[DOI]
  52. Zhang X, "Constitutive cellulase production from glucose using the recombinant Trichoderma reesei strain overexpressing an artificial transcription activator", Bioresour. Technol., 223, pp.317~322 (2017)[DOI]
  53. Maurya DP, "Optimization of solid state fermentation conditions for the production of cellulase by Trichoderma reesei", J. Environ. Biol., 33, pp.5~8 (2012)
  54. Targonski Z, "Continuous semi-solid cultivation for the production of cellulase by Trichoderma reesei mutants using a polyurethane foam carrier and a liquid medium", Acta Biotechnol., 15, pp.289~296 (2010)

관련 논문AI추천

Transcriptional Profiling of the Trichoderma reesei Recombinant Strain HJ48 by RNA-SeqDong Chen, Jun Huang, Qingyan Wang, Renzhi Wu, Ribo Huang한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2016 · 제26권 제7호Transcription Analysis of Recombinant Trichoderma reesei HJ-48 to Compare the Molecular Basis for Fermentation of Glucose and XyloseBo Lu, Jun Huang, Mei Lin, Qingyan Wang, Qiurong Qin, Shijie Liang, Siming Liao한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2020 · 제30권 제10호Improvement of Cellulose Degradation via Highly Expressed LebglA in Radiation Induced Mutant of Lentinula edodes안준우, 이영근, 정경숙(사)한국방사선산업학회 · 방사선산업학회지2018 · 제12권 제2호Sequence Variation of cel7A in a Cellulase Activity Enhanced Mutant of Lentinula edodes KACC42378김진백, 이영근, 정경숙(사)한국방사선산업학회 · 방사선산업학회지2017 · 제11권 제3호Cloning of Cellobiohydrolase Gene (cbhI) in Radiation Induced Mutant of Pleurotus florida김민경, 이영근, Chandran Sathesh-Prabu(사)한국방사선산업학회 · 방사선산업학회지2014 · 제8권 제2호Enhanced β-Glucosidase Production by Penicillium simplicissimum Mutant Strains under Solid State FermentationBunyatratchata Wandee, Mongkolthanaruk Wiyada, Srisapoom Tivaporn, Thongrutsamee Thanaphon한국미생물·생명공학회 · 한국미생물·생명공학회지2025 · 제53권 제1호

이 간행물의 다른 논문 (11건)