본문 바로가기
KERD
논문KCI 등재

Non-Invasive Sex Determination of Asiatic Black Bear (Ursus thibetanus) via Sex-Specific Amplification of the Amelogenin Gene

1

조회

0

다운로드

0

인용

0

참고문헌

키워드

초록

The Asiatic black bear, Ursus thibetanus, is among the most threatened or endangered species in Asia. For its conservation and management, sex identification of U. thibetanus using non-invasive samples (e.g., hair and/or feces) is potentially valuable. In this study, a non-invasive molecular method for sex identification of U. thibetanus samples collected from various countries was first utilized, and it was based on polymerase chain reaction (PCR) amplification of the amelogenin gene via PCRs. Thirty-three bear DNA samples, extracted not only from blood (n=9) but also from hair (n=18) and feces (n=6), were used. We performed sex-specific PCR amplifications of the amelogenin gene using a primer set, SE47 and SE48. The primer set could successfully amplify a single X-specific band for females and both X- and Y-specific bands for males from all blood (100%) and hair (100%) samples. In addition, the primer set could distinguish the sex of bears in four out of a total of six fecal samples (approximately 67%). This study’s findings suggest that this molecular method can be applied to sex identification of Asiatic black bears from various Asian regions using non-invasive samples, such as hair and feces.

Abstract

The Asiatic black bear, Ursus thibetanus, is among the most threatened or endangered species in Asia. For its conservation and management, sex identification of U. thibetanus using non-invasive samples (e.g., hair and/or feces) is potentially valuable. In this study, a non-invasive molecular method for sex identification of U. thibetanus samples collected from various countries was first utilized, and it was based on polymerase chain reaction (PCR) amplification of the amelogenin gene via PCRs. Thirty-three bear DNA samples, extracted not only from blood (n=9) but also from hair (n=18) and feces (n=6), were used. We performed sex-specific PCR amplifications of the amelogenin gene using a primer set, SE47 and SE48. The primer set could successfully amplify a single X-specific band for females and both X- and Y-specific bands for males from all blood (100%) and hair (100%) samples. In addition, the primer set could distinguish the sex of bears in four out of a total of six fecal samples (approximately 67%). This study’s findings suggest that this molecular method can be applied to sex identification of Asiatic black bears from various Asian regions using non-invasive samples, such as hair and feces.

참고문헌 (23)

  1. Aasen, E., "Amplification of the ZFY and ZFX genes for sex identification in humans, cattle, sheep and goats", Biotechnology (Nature Publishing Company), 8, pp.1279~1281 (1990)[DOI]
  2. Bellemain, E., "Improved noninvasive genotyping method : application to brown bear(Ursus arctos)faeces", Molecular Ecology Notes, 4, pp.519~522 (2004)[DOI]
  3. Chapman, V. M., "Linkage of amelogenin(Amel)to the distal portion of the mouse X chromosome", Genomics, 10, pp.23~28 (1991)[DOI]
  4. Ennis, S., "The diagnosis of freemartinism in cattle using sex-specific DNA sequences", Research in Veterinary Science, 67, pp.111~112 (1999)[DOI]
  5. Fukushima, Y., "Sex determination of equine somatic and germ cells by PCR amplification based on the sequence polymorphism of X- and Y-chromosomal amelogenin genes", Animal Science Journal, 70, pp.J6~J10 (1999)[DOI]
  6. Gerloff, U., "Amplification of hypervariable simple sequence repeats(microsatellites)from excremental DNA of wild living bonobos(Pan paniscus)", Molecular Ecology, 4, pp.515~518 (1995)[DOI]
  7. C. W. Gibson, "Bovine amelogenin message heterogeneity: alternative splicing and Y-chromosomal gene transcription", Biochemistry, 31(35), pp.8384~8388 (1992), American Chemical Society (ACS)[DOI]
  8. 한상현, "Identification of Species and Sex of Korean Roe Deer (Capreolus pygargus tianschanicus) Using SRY and CYTB Genes", Animal Cells and Systems, 11(2), pp.165~168 (2007), 한국통합생물학회
  9. Hattori, K., "Sex determination in the sea otter(Enhydra lutris)from tissue and dental pulp using PCR amplification", Canadian Journal of Zoology, 81, pp.52~56 (2003)[DOI]
  10. Hutton, J., "Endangered Species: Threatened Convention: The Past, Present and Future of Cites : The Convention on International Trade in Endangered Species of Wild Fauna and Flora" (2000), Earthscan Publications
  11. IUCN, "IUCN Red List of Threatened Animals" (1996), IUCN
  12. 김백준, "Species- and Sex-specific Multiple PCR Amplifications of Partial Cytochrome b Gene and Zfx", Zfy Introns from Invasive and Non-invasive Samples of Korean Ungulates, 2009, pp.31(5), 369~375[DOI]
  13. 김백준, "Species and Sex Identification of the Korean Goral (Nemorhaedus caudatus) by Molecular Analysis of Non-invasive Samples", Molecules and Cells, 26(3), pp.314~318 (2008), 한국분자세포생물학회
  14. Lagerström, M., "Mapping of the gene for X-linked amelogenesis imperfecta by linkage analysis", American Journal of Human Genetics, 46, pp.120~125 (1990)
  15. Lyngstadaas, S. P., "Amelogenin gene similarity in vertebrates: DNA sequences encoding amelogenin seem to be conserved during evolution", Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, 160, pp.469~472 (1990)[DOI]
  16. Murata, K., "Gender determination of the Linne's two-toed sloth(Choloepus didactylus)using SRY am-plified from hair", The Journal of Veterinary Medical Science, 58, pp.1157~1159 (1996)[DOI]
  17. Palsbøll, P. J., "Determination of gender in cetaceans by the polymerase chain reaction", Canadian Journal of Zoology, 70, pp.2166~2170 (1992)[DOI]
  18. Salido, E. C., "The human enamel protein gene amelogenin is expressed from both the X and the Y chromosomes", American Journal of Human Genetics, 50, pp.303~316 (1992)
  19. Sullivan, K. M., "A rapid and quantitative DNA sex test : fluorescence-based PCR analysis of X-Y homologous gene amelogenin", BioTechniques, 15, pp.636~641 (1993)
  20. Termine, J. D., "Properties of dissociatively extracted fetal tooth matrix proteins. I. Principal molecular species in developing bovine enamel", The Journal of Biological Chemistry, 255, pp.9760~9768 (1980)
  21. Walsh, P. S., "Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material", BioTechniques, 10, pp.506~513 (1991)
  22. Watson, J. M., "Autosomal localization of the amelogenin gene in monotremes and marsupials : implications for mammalian sex chromosome evolution", Genomics, 14, pp.785~789 (1992)[DOI]
  23. Yamamoto, K., "Sex identification of Japanese black bear, Ursus thibetanus japonicus, by PCR based on amelogenin gene", The Journal of Veterinary Medical Science, 64, pp.505~508 (2002)[DOI]

관련 논문AI추천

Planning Non-Invasive Conservation Genetic Experiments Based on Factors Affecting DNA Amplification Using Fecal Samples of Korean Long-Tailed Goral (Naemorhedus caudatus)김백준국립생태원 · 국립생태원회보2024 · 제5권 제3호대한민국에서 복원 중인 반달가슴곰의 개체식별을 위한새로운 미세부수체 마커 개발강호남, 강호찬, 김지영, 김태욱, 명철현, 양정진, 이사현, 임현태, 정우진, 한상현농업생명과학연구원 · 농업생명과학연구2025 · 제59권 제1호한국 산양(Naemorhedus caudatus)에서 DDX3 유전자를 이용한 성 판별김훈, 김종택, 배윤호, 안상진, 이성진, 이효정, 최소영, 홍민욱동물생명과학연구소 · 동물자원연구2020 · 제31권 제2호Microsatellite Markers for Non-Invasive Examination of Individual Identity, Genetic Variation, and Population Differentiation in Two Populations of Korean Long-Tailed Goral (Naemorhedus caudatus)김백준국립생태원 · 국립생태원회보2022 · 제3권 제4호Simple Assessment of Taxonomic Status and Genetic Diversity of Korean Long-Tailed Goral (Naemorhedus caudatus) Based on Partial Mitochondrial Cytochrome b Gene Using Non-Invasive Fecal Samples김백준국립생태원 · 국립생태원회보2021 · 제2권 제1호SRY Gene Sequence Analysis of the Long-tailed Goral (Naemorhedus caudatus)김훈, 김종택, 안상진, 이성진, 이영한, 추은영동물생명과학연구소 · 동물자원연구2023 · 제34권 제1호

이 간행물의 다른 논문 (4건)