본문 바로가기
KERD
논문KCI 등재

Molecular Authentication of Magnoliae Flos Using Robust SNP Marker Base on trnL-F and ndhF Region

1

조회

0

다운로드

0

인용

0

참고문헌

키워드

초록

Magnoliae Flos (Sini in Korean) is one of the most important oriental medicinal plants. In the Korean Herbal Pharmacopeia, the bud of the all species in Manolia denudate and Manolia genus were regarded as the botanical sources for ‘Sini’. Most the dried bud of Manolia denudata, Manolia biondii and Manolia sprengeri were used as ‘Xin-yi’ in China. Therefore, the purpose of this study was to determine and compare the ‘Magnolia’ species, four species including Manolia denudata, M. biondii, M. liliiflora and M. Kobus were analysis of sequencing data revealed DNA polymorphisms. The based on tRNA coding leucine/phenylalanine (trnL-F) and NADH-plastoquinone oxidoreductase subunit 5 (ndhF) sequences in chloroplast DNA. For the identification of ‘Magnolia’ species, polymerase chain reaction (PCR) analysis of chloroplast DNA regions such as ndhF have proven an appropriate method. A single nucleotide polymorphism (SNP) has been identified between genuine “Sini” and their fraudulent and misuse. Specific PCR primers were designed from this polymorphic site within the sequence data, and were used to detect true plants via multiplex PCR.

Abstract

Magnoliae Flos (Sini in Korean) is one of the most important oriental medicinal plants. In the Korean Herbal Pharmacopeia, the bud of the all species in Manolia denudate and Manolia genus were regarded as the botanical sources for ‘Sini’. Most the dried bud of Manolia denudata, Manolia biondii and Manolia sprengeri were used as ‘Xin-yi’ in China. Therefore, the purpose of this study was to determine and compare the ‘Magnolia’ species, four species including Manolia denudata, M. biondii, M. liliiflora and M. Kobus were analysis of sequencing data revealed DNA polymorphisms. The based on tRNA coding leucine/phenylalanine (trnL-F) and NADH-plastoquinone oxidoreductase subunit 5 (ndhF) sequences in chloroplast DNA. For the identification of ‘Magnolia’ species, polymerase chain reaction (PCR) analysis of chloroplast DNA regions such as ndhF have proven an appropriate method. A single nucleotide polymorphism (SNP) has been identified between genuine “Sini” and their fraudulent and misuse. Specific PCR primers were designed from this polymorphic site within the sequence data, and were used to detect true plants via multiplex PCR.

참고문헌 (31)

  1. 이미영, "RAMP를 이용한 황정과 위유의 유전적 분석", 한국약용작물학회지, 14(3), pp.125~129 (2006), 한국약용작물학회
  2. Cheung, K.S, "Pharmaceutical identification of American and oriental ginseng roots by genomic fingerprinting using arbitrarily primed polymerase chain reaction (AP-PCR)", J Ethnopharmacol, 42, pp.67~69 (1994)
  3. Choi, Y.E, "Development of species specific AFLP-derived SCAR marker for authentication of Panax japonicas C. A. Meyer", Biological and Pharmaceutical Bulletin, 31, pp.135~138 (2008)
  4. Cui, X.M, "Authentication of Panax notoginseng by 5S-rRNA spacer domain and random amplified polymorphic DNA (RAPD) Analysis", Planta Medica, 69, pp.584~586 (2003)
  5. Baigalmaa Jigden, "Molecular identification of oriental medicinal plant Schizonepeta tenuifolia bunge (Hyung-Gae) by multiplex PCR", Plant Biotechnology Reports, 4(3), pp.223~228 (2010), 한국식물생명공학회
  6. 진치규, "Molecular Authentication of Morus Folium Using Mitochondrial nad7 Intron 2 Region", 한국자원식물학회지, 26(3), pp.397~402 (2013), 한국자원식물학회[DOI]
  7. Ha, W.Y, "Authentication of Panax ginseng and Panax quinquefolius using amplified fragment length polymorphism (AFLP) and directed amplification of minisatellite region DNA (DAMD)", Journal of Agricultural and Food Chemistry, 50, pp.1871~1875 (2002)
  8. Hall, T.A, "BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95", 98, Nucleic Acids Symp. Ser, pp.1999, 41[DOI]
  9. Hayashi, K, "Development of PCR-based SNP markers for rice blast resistance genes at the Piz locus", Theor. Appl. Genet, 108(7), pp.1212~1220 (2004)
  10. Kim, H.M, "Magnoliae Flos inhibits mast cell-dependent immediate-type allergic reactions", Pharmacological Res, 32(2), pp.107~111 (2002)
  11. Kim, M.Y, "SNP identification and SNP marker development for a GmNARK gene controlling supernodulation in soybean", Theor. Appl. Genet, 110(6), pp.1003~1010 (2005)
  12. 김명겸, "엽록체 DNA 염기서열을 이용한 한약재 지모의 기원 확인 및 유연관계 분석", 한국약용작물학회지, 16(1), pp.20~26 (2008), 한국약용작물학회
  13. 김민경, "Molecular Authentication of Acanthopanacis Cortex by Multiplex-PCR Analysis Tools", 한국자원식물학회지, 27(6), pp.680~686 (2014), 한국자원식물학회[DOI]
  14. Lang, P, "Phylogeny of Castanea (Fagaceae) based on chloroplast trnL-F sequence data", Tree Genetics & Genomes, 2, pp.132~139 (2006)
  15. Murray, M.G, "Rapid isolation of high molecular weight plant DNA", Nucleic acids Research, 8, pp.4321~4325 (1980)
  16. Ngan, F, "Molecular authentication of Panax species", Phytochemistry, 50, pp.787~791 (1999)
  17. Olmstead, R.G, "Application of the chloroplast gene ndhF to angiosperm phylogenetic studies", Plant Molecular Evolution Newsletter, 2, pp.27~30 (1992)
  18. Olmstead, R.G, "Chloroplast DNA systematics: a review of methods and data analysis", American Journal of Botany, 81, pp.1205~1224 (1994)
  19. Palmer, J.D, "Chloroplast DNA variation and plant phylogeny", Ann Missouri Bot Garden, 75, pp.1180~1206 (1988)
  20. Park, M.J, "Molecular identification of Korean ginseng by amplification refractory mutation system-PCR", Food Res. Int, 39, pp.568~574 (2006)
  21. Quadt, D, "Molecular evolution of the trnTUGU trnFGAA region in Bryophtes", Plant Biology, 6(5), pp.545~554 (2004)
  22. Sasaki, Y, "Rapid detection of Panax ginseng by loop-mediated isothermal amplification and its application to authentication of ginseng", Biological and Pharmaceutical Bulletin, 31, pp.1806~1808 (2008)
  23. Shiokai, S, "Leaf-punch method to prepare a large number of PCR templates from plants for SNP analysis", Molecular Breeding, 23(2), pp.329~336 (2008)
  24. Shaw, P.C, "Authentication of Panax species and their adulterants by random-primed polymerase chain reaction", Planta Medica, 61, pp.466~469 (1995)
  25. Young-HunShim, "Molecular Differentiation of Panax Species by RAPD Analysis", Archives of Pharmacal Research, 26(8), pp.601~605 (2003), 대한약학회
  26. Taberlet, P, "Universal primers for amplification of three non-coding region of chloroplast DNA", Plant Molecular Biology, 17, pp.1105~1109 (1991)
  27. Wang, B, "Research progress on Nidus vespae, a traditional Chinese medicine derived from insents", Journal of Pharmaceutical and Scientific Innovation, 2(6), pp.1~9 (1996)
  28. Wang, J, "Application of sequence characterized amplified region (SCAR) analysis to authenticate Panax species and their adulterants", Planta Medica, 67, pp.781~783 (2001)
  29. Zhang, W.H, "Phylogeny of the Dipsacales s.I. based on chloroplast trnL-F and ndhF sequences", Molecular Phylogenetics and Evolution, 26, pp.176~189 (2003)
  30. Zhu. S, "Species identification from ginseng drugs by multiplex amplification refractory mutation system (MARMS)", Planta Medica, 70, pp.189~192 (2004)
  31. Zhu. S, "Development of a DNA microarray for authentication of ginseng drugs based on 18S rRNA gene sequence", Journal of Agricultural and Food Chem, 56, pp.3953~3959 (2008)

관련 논문AI추천

이 간행물의 다른 논문 (9건)