약용작물의 기원 판별에 관한 분자생물학적 기술 개발 현황
Development of molecular biological techniques for the differentiation of medicinal plant species
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초록
Medicinal plants resources are becoming importantassets since their usages have been expanded to the developmentof functional foods for human health, more attractive cosmetics,and pharmaceutical industries. However, their phylogeneticorigins and names are different from each country and quiteoften they are mixed each other resulting in the confusion forconsumers. In particular, when they are very similar basedon their morphological characteristics and distributed asdried roots, it is extremely difficult to differentiate theirorigins even by specialists. Recently, “DNA barcodes” havebeen extensively applied to identify their origin of medicinalplant species. In this review, we tried to overview the currentresearch achievements for the development of suitable“DNA barcodes” regarding to the differentiation of medicinalplant species. Furthermore, more advanced techniques includingamplification refractory mutation system (ARMS)-PCR,multiplex single base extension (MSBE), high-resolution melting(HRM) curve analyses are also discussed for their practicalapplications in the authentification of particular medicinalplant species.
Abstract
Medicinal plants resources are becoming importantassets since their usages have been expanded to the developmentof functional foods for human health, more attractive cosmetics,and pharmaceutical industries. However, their phylogeneticorigins and names are different from each country and quiteoften they are mixed each other resulting in the confusion forconsumers. In particular, when they are very similar basedon their morphological characteristics and distributed asdried roots, it is extremely difficult to differentiate theirorigins even by specialists. Recently, “DNA barcodes” havebeen extensively applied to identify their origin of medicinalplant species. In this review, we tried to overview the currentresearch achievements for the development of suitable“DNA barcodes” regarding to the differentiation of medicinalplant species. Furthermore, more advanced techniques includingamplification refractory mutation system (ARMS)-PCR,multiplex single base extension (MSBE), high-resolution melting(HRM) curve analyses are also discussed for their practicalapplications in the authentification of particular medicinalplant species.
참고문헌 (41)
- Arnot DE, "Digital codes from hypervariable tandemly repeated DNA sequences in the Plasmodium falciparum circumsporozoite gene can genetically barcode isolates", Mol Biochem Parasitol, 61, pp.15~24 (1993)
- 배갈마, "염기서열을 이용한 한약재 형개의 기원 및 유연관계 분석", 한국약용작물학회지, 17(1), pp.46~53 (2009), 한국약용작물학회
- CBOL Plant Working Group, "A DNA barcode for land plants", Proc Natl Acad Sci, 106, pp.12794~12797 (2009)
- Chase MW, "A proposal for a standardised protocol to barcode all land plants", Taxon, 56, pp.295~299 (2007)
- Chen S, "Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species", PLoS One, 5(1-8), pp.e8613~ (2010)
- Savolainen V, "Broad-scale amplification of matK for DNA barcoding plants, a technical note", Botanical J of the Linnean Society, 164, pp.1~9 (2010)
- Fushimi H, "A new approach for the identification of a Chinese traditional medicine, “Chuanxiong” by 18S ribosomal RNA gene sequences", Phytomedicin, 3, pp.387~389 (1997)
- Gao T, "Identification of medicinal plants in the family Fabaceae using a potential DNA barcode ITS 2", J Ethnopharmacology, 130, pp.116~121 (2010)
- He Y, "Internal transcribed spacers (ITS) identification of Angelica anomala Lallem Chuanbaizhi (in Chinese) cultivars collected in Sichuan and their molecular phylogenetic analysis with other Angelica L. species", J Med Plants Res, 5, pp.3653~3659 (2011)
- Hebert PDN, "Biological identifications through DNA barcodes", Proc Royal Soc London, series B, 270, pp.313~321 (2003)
- Hebert PDN, "Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species", Proc Biol Sci, 270, pp.S96~S99 (2003)
- Hollingsworth PM, "Choosing and using a plant DNA barcode", PLoS One, 6, pp.e19254~ (2011)
- Jaakola L, "Novel approaches based on DNA barcoding and high-resolution melting of amplicons for authenticity analyses of berry species", Food Chem, 123, pp.492~500 (2010)
- Kalivas A, "DNA barcode ITS2 coupled with high resolution melting (HRM) analysis for taxonomic identification of Sideritis species growing in Greece", Mol Biol Rep, 41, pp.5147~5155 (2014)
- Kim JH, "Diversity and evolution of major Panax species revealed by scanning the entire chloroplast intergenic spacer sequences", Genet Resour Crop Evol, 60, pp.413~425 (2013)
- 김영화, "미각센서와 DNA 염기서열을 이용한 당귀류 비교", 대한본초학회지, 27(6), pp.37~42 (2012), 대한본초학회
- Kress WJ, "A two-locus global DNA barcode for land plants: The coding rbcL gene complements the non-coding trnH-psbA spacer region", PLoS ONE, 2, pp.e508~ (2007)
- Kuo LY, "First insights into fern matK phylogeny", Mol Phylo Evol, 59, pp.556~566 (2011)
- 이영미, "matK와 rbcL DNA 바코드 분석을 통한 半夏 및 半夏 유사 한약재 유전자 감별", 대한본초학회지, 28(6), pp.53~58 (2013), 대한본초학회
- Little S, "current protocols in human molecular genetics", pp.9.8.1.~9.8.12 (1994), Jhon Wiley & Sons, IOOnc
- Liu YP, "MatK ITS nucleotide sequencing of crude drug chuanxiong and phylogenetic relationship between their species from China and Japan", Yao Xue Xue Bao, 37, pp.63~68 (2002)
- Mader E, "Quantitative high-resolution melting analysis for detecting adulterations", Anal Biochem, 409, pp.153~155 (2011)
- 문병철, "DNA 바코드 분석을 통한 소계(小薊) 및 대계(大薊) 기원식물 감별과 종간 유연관계 분석", 대한본초학회지, 28(3), pp.75~84 (2013), 대한본초학회
- Newton CR, "Analysis of any point mutation in DNA. The amplification refractory mutation system(ARMS)", Nucl Acids Res, 17, pp.2503~2516 (1989)
- Ohsako T, "Nucleotide sequence variation of the chloroplast trnK", matK region in two wild Fagopyrum (Polygonaceae) species, F. leptopodum and F. statice, 2001, pp.76, 39~46
- Identification method of Liriope species and identification probe thereof, "Park YJ", Korea patent, ~, pp.Korea patent 10-2014-0038154 (2014)
- Piredda R, "Prospects of barcoding the Italian wild dendroflora: oaks reveal severe limitations to tracking species identity", Mol Eco Ress, 11, pp.72~73 (2010)
- Ren BQ, "Species identification of Alnus (Betulaceae) using nrDNA and cpDNA genetic markers", Mol Eco Res, 10, pp.594~605 (2010)
- Roy S, "Universal plant DNA barcode loci may not work in complex groups: A case study with Indian Berberis species", PLoS ONE, 5, pp.e13674~ (2010)
- 송임근, "천궁의 기원과 식별을 위한 분자마커", 대한본초학회지, 24(4), pp.1~8 (2009), 대한본초학회
- Sun XQ, "DNA barcoding of populations of Fallopia multiflora, an indigenous herb in China", Genet Mol Res, 12, pp.4078~4089 (2013)
- Valentini A, "DNA barcoding for ecologists", Trends Ecol Evol, 24, pp.110~130 (2008)
- Valentini A, "New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach", Mol Ecol Res, 9, pp.51~60 (2009)
- Vietina M, "Detection of plant oil DNA using high resolution melting (HRM) post PCR analysis: A tool for disclosure of olive oil adulteration", Food Chem, 141, pp.3820~3826 (2013)
- von Cräutlein M, "DNA barcoding: a tool for improved taxon identification and detection of species diversity", Biodiversity and Conservation, 20, pp.373~389 (2011)
- Wicke S, "Universal primers for amplification of the trnK", matK region in land plants, 2009, pp.66, 285~288
- Yan P, "Genetic variation and identification of cultivated Fallopia multiflora and its wild relatives by using chloroplast matK and 18S rRNA gene sequences", Planta Med, 74, pp.1504~1509 (2008)
- SNP primers for Gumpoong and Chungsun selection of Korean ginseng (Panax ginseng C.A. Meyer) and method for Gumpoong and Chungsun distinciton using the same, "Yang DC", KR patent, ~, pp.KR patent 10-2012-0106414 (2012)
- Yao H, "Use of ITS2 region as the universal DNA barcode for plants and animals", PLoS ONE, 5, pp.e13102~ (2010)
- Zheng CJ, "Molecular authentification of the traditional medicinal plant Fallopia multiflora", Planta Med, 75, pp.870~872 (2009)
- Zhu S, "Molecular identification of “Chuanxiong” by nucleotide sequence and multiplex single base extension analysis on chloroplast trnK gene", Biol Pharm Bull, 30, pp.527~531 (2007)