진보된 DNA barcoding 기술을 이용한 당귀(Angelica)속 식물의 기원 판별 기술에 관한 연구 동향
Trends in the development of discriminating between Angelica L. species using advanced DNA barcoding techniques
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We reviewed current research trends for discriminating between species of the Angelica genus, a group of important medicinal plants registered in South Korea, China, and Japan. Since the registered species for medicinal purposes differ by country, they are often adulterated as well as mixed in commercial markets. Several DNA technologies have been applied to distinguish between species. However, one of the restrictions is insufficient single-nucleotide polymorphisms (SNPs) within the target DNA fragments; in particular, among closely-related species. Recently, amplification refractory mutation system (ARMS)-PCR and highresolution melting (HRM) curve analysis techniques have been developed to solve such a problem. We applied both technologies, and found they were able to discriminate several lines of Angelica genus, including A. gigas Nakai, A. gigas Jiri, A. sinensis, A. acutiloba Kitag, and Levisticum officinale. Furthermore, although the ITS region differs only by one SNP between A. gigas Nakai and A. gigas Jiri, both HRM and ARMS-PCR techniques were powerful enough to discriminate between them. Since both A. gigas Nakai and A. gigas Jiri are native species to South Korea and are very closely related, they are difficult to discriminate by their morphological characteristics. For practical applications of these technologies, further research is necessary with various materials, such as dried or processed materials (jam, jelly, juice, medicinal decoctions, etc.) in commercial markets.
Abstract
We reviewed current research trends for discriminating between species of the Angelica genus, a group of important medicinal plants registered in South Korea, China, and Japan. Since the registered species for medicinal purposes differ by country, they are often adulterated as well as mixed in commercial markets. Several DNA technologies have been applied to distinguish between species. However, one of the restrictions is insufficient single-nucleotide polymorphisms (SNPs) within the target DNA fragments; in particular, among closely-related species. Recently, amplification refractory mutation system (ARMS)-PCR and highresolution melting (HRM) curve analysis techniques have been developed to solve such a problem. We applied both technologies, and found they were able to discriminate several lines of Angelica genus, including A. gigas Nakai, A. gigas Jiri, A. sinensis, A. acutiloba Kitag, and Levisticum officinale. Furthermore, although the ITS region differs only by one SNP between A. gigas Nakai and A. gigas Jiri, both HRM and ARMS-PCR techniques were powerful enough to discriminate between them. Since both A. gigas Nakai and A. gigas Jiri are native species to South Korea and are very closely related, they are difficult to discriminate by their morphological characteristics. For practical applications of these technologies, further research is necessary with various materials, such as dried or processed materials (jam, jelly, juice, medicinal decoctions, etc.) in commercial markets.
참고문헌 (41)
- Blank I, "Analysis of the seasoning-like flavour substances of a commercial lovage extract (Levisticum officinale Koch.)", Flavour Fragr J, 8, pp.191~195 (1993)
- Bylaite E, "Influence of harvesting time on the composition of volatile components in dierent anatomical parts of lovage (Levisticum officinale Koch.)", J Agric Food Chem, 46, pp.3735~3740 (1998)
- Chen C, "Mining of simple sequence repeats(SSRs)loci and development of novel transferability-across EST-SSR markers from de novo transcriptome assembly of Angelica dahurica", PLoS ONE, 14, pp.e0221040~ (2019)
- 최호영, "當歸類 한약재 감별을 위한 ITS 부위의 염기서열 및 AFLP 분석", 대한본초학회지, 19(2), pp.91~100 (2004), 대한본초학회
- Choo BK, "Development of SCAR markers for the discrimination of three species of medicinal plants, Angelica d ecu rsiva(Peucedanum decursivum), Peucedanum praeruptorum and Anthricus sylvestris, based on the internal transcribed spacer(ITS)sequence and random amplified polymorphic DNA(RAPD)", Biol Pharm Bull, 32, pp.24~30 (2009)
- "Community Herbal Monograph on Levisticum ocinale Koch,Radix; EMA, European Medicines Agency: Amsterdam, The Netherlands, 2012" (2012)[URL]
- Feng T, "Molecular authentication of the traditional Chinese medicinal plant Angelica sinensis based on internal transcribed spacer of nrDNA", Electron J Biotechnol, 13 (2010)
- "식품의 기준 및 규격" (2015)[URL]
- 길진수, "Angelica 속 식물의 종판별을 위한 연구현황 및 전망", Journal of Plant Biotechnology, 43(2), pp.151~156 (2016), 한국식물생명공학회[DOI]
- 한은희, "약용작물의 기원 판별에 관한 분자생물학적 기술 개발 현황", Journal of Plant Biotechnology, 42(1), pp.6~12 (2015), 한국식물생명공학회[DOI]
- Han JP, "An authenticity survey of herbal medicines from markets in China using DNA barcoding", Sci Rep, 18723, pp.1~6 (2016)
- Han EH, "Development of molecular markers, based on chloroplast and ribosomal DNA regions, to discriminate three popular medicinal plant species, Cynanchum wilfordii, Cynanchum auriculatum, and Polygonum multiflorum", Mol Biol Rep, 43, pp.323~332 (2016)
- Han B-X, "Specific PCR identification between Peucedanum praeruptorum and Angelica decursiva and identification between them and adulterant using DNA barcode", Pharmacognosy Magazine, 13, pp.38~45 (2017)
- Han L, "The neuroprotective effects and probable mechanisms of Ligustilide and its degradative products on intracerebral hemorrhage in mice", Int Immunopharmacol, 63, pp.43~57 (2018)
- He Y, "Authentication of Angelica anomala Avé-Lall cultivars through DNA barcodes", Mitochondrial DNA, 23, pp.100~105 (2012)
- 김선애, "참당귀, 중국당귀, 일당귀 및 그 구성 생화합물의 약리작용에 대한 고찰", 대한한의학회지, 32(4), pp.1~24 (2011), 대한한의학회
- Kim WJ, "Rapid authentication of the herbal medicine plant species Aralia continentalis Kitag. and Angelica biserrata C. Q. Yuan and R. H. Shan using ITS2 sequences and multiplex-SCAR markers", Molecules, 21, pp.270~276 (2016)
- 김윤희, "약용식물의 기원 판별을 위한 Bar-HRM 분석기술의 응용", Journal of Plant Biotechnology, 45(1), pp.9~16 (2018), 한국식물생명공학회
- Korea Food & Drug Administration, "The Korean Herbal Pharma�copoeia" (2006), Korea Food & Drug Administration
- Lee MY, "Discrimination of the three Angelica species using the RAPDs and Internal Root Structure", Kor J Med Crop Sci, 8, pp.243~249 (2000)
- 이수진, "구지뽕 나무의 엽록체 TrnL-F 영역 염기서열 분석을 통한 특이적 SNP 분자마커의 확인", Journal of Plant Biotechnology, 44(2), pp.135~141 (2017), 한국식물생명공학회
- 이신우, "엉겅퀴의 ITS 영역 염기서열 분석을 통한 특이적 SNP 분자마커의 개발", Journal of Plant Biotechnology, 45(2), pp.102~109 (2018), 한국식물생명공학회
- 이신우, "세발당귀(Angelica gigas Jiri)의 판별을 위한 ARMS-PCR용 분자표지 개발", Journal of Plant Biotechnology, 48(1), pp.26~33 (2021), 한국식물생명공학회[DOI]
- 이신우, "ITS 영역의 HRM 분석을 통한 참당귀(Angelica gigas Nakai)의 특이적 SNP 분자표지 개발", Journal of Plant Biotechnology, 48(2), pp.71~76 (2021), 한국식물생명공학회[DOI]
- Liu Q, "Development and characterization of 16 novel microsatellite markers by transcriptome sequencing for Angelica dahurica and test for cross-species amplification", BMC Plant Biol, 20, pp.152~160 (2020)
- Liu M, "Constructing a core collection of the medicinal plant Angelica biserrata using genetic and metabolic data", Front Plant Sci, 11, pp.600249~ (2020)
- Long FY, "Klotho upregulation contributes to the neuroprotection of ligustilide against cerebral ischemic injury in mice", Eur J Pharmacol, 820, pp.198~205 (2018)
- Lu Y, "Isolation and characterization of 18 polymorphic microsatellite markers for the"Female Ginseng"angelica sinensis(Apiaceae)and cross-species amplification", Biochem Sys Ecol, 61, pp.488~492 (2015)
- Ma Z., "The anti-inflammatory effect of Z-Ligustilide in experimental ovariectomised osteopenic rats", Inflammation, 35, pp.1793~1797 (2012)
- Ma Z, "Anti-inflammatory Effects of Z-Ligustilide Nanoemulsion", Inflammation, 36, pp.294~299 (2013)
- Mei Z, "Efficiency of improved RAPD and ISSR markers in assessing genetic diversity and relationships in Angelica sinensis (Oliv.)Diels varieties of China", Electron J Biotechnol, 18, pp.96~102 (2015)
- Mizukami H, "Nucleotide sequence of 5S-rDNA intergenic spacer region on Angelica acutiloba", Nat Med, 51, pp.376~378 (1997)
- Newton CR, "Analysis of point mutation in DNA. The amplification refractory mutation system (ARMS)", Nucl Acids Res, 17, pp.2503~2516 (1989)
- Noh P, "Authentication of the herbal medicine Angelicae Dahuricae Radix using an ITS sequence-based multiplex SCAR assay", Molecules, 23, pp.2134~2146 (2018)
- Park IK, "Sequencing and comparative analysis of the chloroplast genome of Angelica polymorpha and the development of a novel indel marker for species", Molecules, 24, pp.1038~1052 (2019)
- 성정숙, "당귀의 해부형태학적 특징에 따른 기원판별", 한국약용작물학회지, 12(1), pp.67~72 (2004), 한국약용작물학회
- 유홍섭, "당귀의 종별 생육특성 및 생산성 비교", 한국약용작물학회지, 12(1), pp.43~46 (2004), 한국약용작물학회
- Yuan QJ, "Identification of species and materia medica within Angelica L, (Umbelliferae) based on phylogeny inferred from DNA barcodes", Mol Ecol Resour, 15, pp.358~371 (2015)
- Zhang X, "Studies on establishing rRNA gene map of Angelica sinensis and Rheum palmatum from Gansu by DNA sequencing", J Chi Med Mat, 26, pp.481~484 (2003)
- Zhang C, "Development of SCAR markers based on improved RAPD amplification fragments and molecular cloning for authentication of herbal medicines Angelica sinensis, Angelica acutiloba and Levisticum officinale", Nat Prod Com, 10, pp.1743~1747 (2015)
- Zhao KJ, "Molecular genetic and chemical assessment of radix Angelica(Danggui)in China", J Agr Food Chem, 51, pp.2576~2525 (2003)
