Improving the Rapidity and Accuracy of Carbapenem-Resistant Enterobacteriaceae Detection by Shortening the Enrichment Duration
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Identifying carbapenem-resistant Enterobacteriaceae (CRE) is necessary to prevent nosocomial CRE infection outbreaks. Here, a rapid identification method with reduced enrichment time was developed without compromising accuracy. A total of 49 rectal swabs requested for CRE screening at the Department of Diagnostic Medicine at Hospital B in Busan, Korea, were included in this study. Specimens were inoculated on MacConkey and CHROMID Carba media either directly or following enrichment for 3, 6, and 24 h in 100 μl trypticase soy broth containing an ertapenem disk. The enriched cultures were further inoculated on CHROMID Carba or MacConkey media containing an ertapenem disk. In total, 19 CRE and 5 carbapenemintermediate Enterobacteriaceae isolates were obtained from the 49 swabs. Among the 19 CRE isolates, carbapenemase-producing Enterobacteriaceae constituted 13 strains. Moreover, of the 19 CRE isolates, 16 (81.25%) and 17 (88.24%) were identified from the direct cultures on MacConkey and CHROMID Carba media, respectively. After 3 h of enrichment, the proportions of the CRE identified in the media were: MacConkey medium, 16/19 (81.25%); CHROMID Carba medium, 17/19 (88.24%); and MacConkey medium containing an ertapenem disk, 17/19 (88.24%). The detection rates after 6 h of enrichment were the same for all three media (19/19 strains, 100%), whereas those after 24 h of enrichment were 21, 22, and 24 strains, respectively, but included false positives. These findings suggest that a 6-h enrichment before inoculation on the CHROMID Carba medium is optimal for the rapid and accurate detection of CRE in clinical samples.
Abstract
Identifying carbapenem-resistant Enterobacteriaceae (CRE) is necessary to prevent nosocomial CRE infection outbreaks. Here, a rapid identification method with reduced enrichment time was developed without compromising accuracy. A total of 49 rectal swabs requested for CRE screening at the Department of Diagnostic Medicine at Hospital B in Busan, Korea, were included in this study. Specimens were inoculated on MacConkey and CHROMID Carba media either directly or following enrichment for 3, 6, and 24 h in 100 μl trypticase soy broth containing an ertapenem disk. The enriched cultures were further inoculated on CHROMID Carba or MacConkey media containing an ertapenem disk. In total, 19 CRE and 5 carbapenemintermediate Enterobacteriaceae isolates were obtained from the 49 swabs. Among the 19 CRE isolates, carbapenemase-producing Enterobacteriaceae constituted 13 strains. Moreover, of the 19 CRE isolates, 16 (81.25%) and 17 (88.24%) were identified from the direct cultures on MacConkey and CHROMID Carba media, respectively. After 3 h of enrichment, the proportions of the CRE identified in the media were: MacConkey medium, 16/19 (81.25%); CHROMID Carba medium, 17/19 (88.24%); and MacConkey medium containing an ertapenem disk, 17/19 (88.24%). The detection rates after 6 h of enrichment were the same for all three media (19/19 strains, 100%), whereas those after 24 h of enrichment were 21, 22, and 24 strains, respectively, but included false positives. These findings suggest that a 6-h enrichment before inoculation on the CHROMID Carba medium is optimal for the rapid and accurate detection of CRE in clinical samples.
참고문헌 (27)
- European Centre for Disease Prevention and Control, "Carbapenem-resistant Enterobacteriaceae, second update - 26 September 2019", ECDC, 1~10 (2019)
- "FAQs about choosing and implementing a CRE definition. Atlanta: Centers for Disease Control and Prevention" (2015)[URL]
- Marston HD, "Antimicrobial resistance", JAMA, 316, pp.1193~1204 (2016)
- Centers for Disease Control and Prevention, "Antibiotic resistance threats in the United States, 2019", pp.73~ (2019), CDC
- McCann E, "Carbapenem-nonsusceptible gram-negative pathogens in ICU and non-ICU settings in US hospitals in 2017: A multicenter study", Open Forum Infect. Dis, 5, pp.ofy241~ (2018)
- Potter RF, "The rapid spread of carbapenem-resistant Enterobacteriaceae", Drug Resist. Updat, 29, pp.30~46 (2016)
- Iovleva A, "Carbapenem-resistant Enterobacteriaceae", Clin. Lab. Med, 37, pp.303~315 (2017)
- 이효진, "카바페넴 내성 장내세균: 최신지견과 치료전략", 대한의사협회지, 61(4), pp.281~289 (2018), 대한의사협회[DOI]
- Kim JO, "Outbreak of KPC-2-producing Enterobacteriaceae caused by clonal dissemination of Klebsiella pneumoniae ST307 carrying an IncX3-type plasmid harboring a truncated Tn4401a", Diagn. Microbiol. Infect. Dis, 87, pp.343~348 (2017)
- 정석훈, "Prevalence and Molecular Characteristics of Carbapenemase-Producing Enterobacteriaceae From Five Hospitals in Korea", Annals of Laboratory Medicine, 36(6), pp.529~535 (2016), 대한진단검사의학회
- Infectious diseases surveillance yearbook, 2019, "Korea Centers for Disease Control & Prevention", KCDC, 38~, pp.Report No.: 11-1352159-000048-10 (2019)
- "Infectious disease portal. 2020" (2020)[URL]
- Healthcare associated infection control guideline: VRSA, "CRE", Korea Centers for Disease Control & Prevention, 2018, pp.38~51, Report No.: 11-1352159-00832-10
- "Facility guidance for control of carbapenem-resistant Enterobacteriaceae (CRE)" (2015)[URL]
- Tischendorf J, "Risk of infection following colonization with carbapenem-resistant Enterobactericeae : A systematic review", Am. J. Infect. Control, 44, pp.539~543 (2016)
- Ka-wai Ho, "Active surveillance of carbapenem-resistant Enterobacteriaceae in intensive care units: Is it cost-effective in a nonendemic region?", American Journal of Infection Control, 44(4), pp.394~399 (2016), Elsevier BV[DOI]
- Poirel L, "Rapidec Carba NP test for rapid detection of carbapenemase producers", J. Clin. Microbiol, 53, pp.3003~3008 (2015)
- Clinical and Laboratory Standards Institute, "Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically", ~ (2018)
- Simner PJ, "Evaluation of multiple methods for detection of gastrointestinal colonization of carbapenem-resistant organisms from rectal swabs", J. Clin. Microbiol, 54, pp.1664~1667 (2016)
- Copur-Cicek A, "Determination of a novel integron-located variant(blaOXA-320)of Class D β-lactamase in Proteus mirabilis", J. Basic Microbiol, 54, pp.1030~1035 (2014)
- Tsai YM, "Combination of modified carbapenem inactivation method(mCIM)and EDTACIM(eCIM)for phenotypic detection of carbapenemase-producing Enterobacteriaceae", BMC Microbiol, 20, pp.315~ (2020)
- van der Zwaluw K, "The carbapenem inactivation method(CIM), a simple and low-cost alternative for the Carba NP test to assess phenotypic carbapenemase activity in gram-negative rods", PLoS One, 10, pp.e0123690~ (2015)
- Jeong S, "Evaluation of peptide nucleic acid-mediated multiplex real-time PCR kits for rapid detection of carbapenemase genes in gram-negative clinical isolates", J. Microbiol. Methods, 113, pp.4~9 (2015)
- "Distribution of carbapenem-resistant Enterobacteriaceae (CRE) in Korea, 2018-2020"[URL]
- 서수민, "중규모 종합병원 대상 카바페넴 내성 장내세균속균종(Carbapenemresistant Enterobacteriaceae ) 획득위험 예측모형의 외적타당도 평가", Journal of Korean Academy of Nursing, 50(4), pp.621~630 (2020), 한국간호과학회[DOI]
- 김도균, "Xpert CARBA-R Assay for the Detection of Carbapenemase-Producing Organisms in Intensive Care Unit Patients of a Korean Tertiary Care Hospital", Annals of Laboratory Medicine, 36(2), pp.162~165 (2016), 대한진단검사의학회
- Peretz A, "Efficacy of an enrichment media for increasing threshold for carbapenem-resistant Enterobacteriaceae screening", J. Clin. Lab. Anal, 30, pp.563~566 (2016)
