A report of six unrecorded radiation-resistant bacterial species isolated from soil in Korea in 2018
1
조회
0
다운로드
0
인용
0
참고문헌
키워드
초록
Six bacterial strains 18JY42-3, 18SH, 18JY76-11, 17J11-11, 18JY14-14, and 18JY15-11 assigned to the phylum Proteobacteria, Firmicutes, and Actinobacteria were isolated from soil samples in Korea. The Cohnella species, strain 18JY42-3 was Gram-stain-positive, short rod-shaped and beige-colored. The Methylobacterium species, strains 18SH and 18JY76-11 were Gram-stain-negative, short rod-shaped and pinkcolored. The Microterricola species, strain 17J11-11 was Gram-stain-positive, short rod-shaped and yellowcolored. The Paenarthrobacter species, strains 18JY14-14 and 18JY15-11 were Gram-stain-positive, short rod-shaped and white-colored. Phylogenetic analysis based on 16S rRNA gene sequence showed that strains 18JY42-3, 18SH, 18JY76-11, 17J11-11, 18JY14-14, and 18JY15-11 were most closely related Cohnella rhizosphaerae (MH497628; 98.8%), Methylobacterium goesingense (MH497632; 99.1%), Methylobacterium populi (MH497635; 99.9%), Microterricolagilva (MH504108; 98.4%), Paenarthrobacter nicotinovorans (MH497641; 100%), and Paenarthrobacter nitroguajacolicus (MH497646; 99.2%), respectively. All the six unrecorded strains showed resistance to UV radiation. This is the first report of these six species in Korea.
Abstract
Six bacterial strains 18JY42-3, 18SH, 18JY76-11, 17J11-11, 18JY14-14, and 18JY15-11 assigned to the phylum Proteobacteria, Firmicutes, and Actinobacteria were isolated from soil samples in Korea. The Cohnella species, strain 18JY42-3 was Gram-stain-positive, short rod-shaped and beige-colored. The Methylobacterium species, strains 18SH and 18JY76-11 were Gram-stain-negative, short rod-shaped and pinkcolored. The Microterricola species, strain 17J11-11 was Gram-stain-positive, short rod-shaped and yellowcolored. The Paenarthrobacter species, strains 18JY14-14 and 18JY15-11 were Gram-stain-positive, short rod-shaped and white-colored. Phylogenetic analysis based on 16S rRNA gene sequence showed that strains 18JY42-3, 18SH, 18JY76-11, 17J11-11, 18JY14-14, and 18JY15-11 were most closely related Cohnella rhizosphaerae (MH497628; 98.8%), Methylobacterium goesingense (MH497632; 99.1%), Methylobacterium populi (MH497635; 99.9%), Microterricolagilva (MH504108; 98.4%), Paenarthrobacter nicotinovorans (MH497641; 100%), and Paenarthrobacter nitroguajacolicus (MH497646; 99.2%), respectively. All the six unrecorded strains showed resistance to UV radiation. This is the first report of these six species in Korea.
참고문헌 (17)
- Atlas, R., "Principles of Microbiology" (1997), Mc-Grill-Hill
- Felsenstein, J., "Confidence limits on phylogenies: an approach using the bootstrap", Evolution, 39, pp.783~791 (1985)[DOI]
- Garrity, G.M., "Bergey's Manual of Systematic Bacteriology", pp.1~ (2005), Springer
- Im S., "Comparative survival analysis of 12 histidine kinase mutants of Deinococcus radiodurans after exposure to DNA-damaging agents", Bioprocess and Biosystems Engineering, 36, pp.781~789 (2013)[DOI]
- Kampfer P., "Deinococcus aquatilis sp. nov., isolated from water", International Journal of Systematic and Evolutionary Microbiology, 58, pp.2803~2806 (2008)[DOI]
- Kimura, M., "The neutral theory of molecular evolution" (1983), Cambridge University Press
- Saitou, N., "The neighbor-joining method: a new method for reconstructing phylogenetic trees", Molecular Biology and Evolution, 4, pp.406~425 (1987)
- Selvam K., "DdrA, DdrD, and PprA: components of UV and mitomycin C resistance in Deinococcus radiodurans R1", PLoS One, 8(7), pp.e69007~ (2013)[DOI]
- Schrempf, H., "Recognition and degradation of chitin by streptomycetes", Antonie van Leeuwenhoek, 79, pp.285~289 (2001)[DOI]
- Shin, N.R., "Proteobacteria: microbial signature of dysbiosis in gut microbiota", Trends in Biotechnology, 33(9), pp.496~503 (2015)[DOI]
- Stackebrandt, E., "Proposal for a new hierarchic classification system, Actinobacteria classis nov", International Journal of Systemic Bacteriology, 47, pp.479~491 (1997)[DOI]
- Tamura K., "MEGA5 : molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods", Molecular Biology and Evolution, 28, pp.2731~2739 (2011)[DOI]
- Weisburg W. G., "16S ribosomal DNA amplification for phylogenetic study", Journal of Bacteriology, 173, pp.697~703 (1991)[DOI]
- Williams, K.P., "A robust species tree for the Alphaproteobacteria", Journal of Bacteriology, 189, pp.4578~4586 (2007)[DOI]
- Willems A., "Comamonadaceae, a new family encompassing the acidovorans rRNA complex, including Variovorax paradoxus gen. nov., comb. nov., for Alcaligenes paradoxus(Davis)1969", International Journal of Systematic Bacteriology, 41, pp.445~450 (1991)[DOI]
- Woese, C.R., "Bacterial evolution", Microbiological Reviews, 51(2), pp.221~271 (1987)
- Yutin, N., "Phylogenomics of prokaryotic ribosomal proteins", PLoS ONE, 7, pp.e36972~ (2012)[DOI]
