본문 바로가기
KERD
논문KCI 등재

식물 유성 생식과정에서 후성유전학적 정보해석 및 연구현황

Current status and prospects of epigenetic information in sexual reproductive processes of plants

1

조회

0

다운로드

0

인용

0

참고문헌

키워드

주제분류농학

초록

Rapid progress in epigenetic studies has resulted in genome wide information of genetic functions, other than DNA sequence information. However, insufficient understanding and unclear research direction in epigenetics has failed to attract many researchers. Here, we review the sexual reproduction processes that are particularly related to epigenetics in plants. We aim to elucidate the roles of epigenetic information and molecular mechanisms involved in the complex sexual reproduction process of plants, and examine their biological significance.

Abstract

Rapid progress in epigenetic studies has resulted in genome wide information of genetic functions, other than DNA sequence information. However, insufficient understanding and unclear research direction in epigenetics has failed to attract many researchers. Here, we review the sexual reproduction processes that are particularly related to epigenetics in plants. We aim to elucidate the roles of epigenetic information and molecular mechanisms involved in the complex sexual reproduction process of plants, and examine their biological significance.

참고문헌 (44)

  1. Bjorn TA, "Epigenetic Control of the Genome—Lessons from Genomic Imprinting", Genes, 5, pp.635~655 (2014)
  2. Bourc'his D, "A small-RNA perspective on gametogenesis, fertilization, and early zygotic development", Science, 330, pp.617~622 (2010)
  3. Calarco JP, "Reprogramming of DNA methylation in pollen guides epigenetic inheritance via small RNA", Cell, 151, pp.194~205 (2012)
  4. Cao X, "Role of the A rabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing", Curr Biol, 12, pp.1138~1144 (2002)
  5. Chen HM, "22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants", Proc Natl Acad Sci USA, 107, pp.15269~15274 (2010)
  6. 최장선, "시토신 탈메틸화 관련 NtROS2a 유전자 도입 형질전환벼의 건조스트레스 내성 증진", Journal of Plant Biotechnology, 43(3), pp.376~382 (2016), 한국식물생명공학회
  7. Choi Y, "DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in Arabidopsis", Cell, 110, pp.33~42 (2002)
  8. Feng S, "Epigenetic reprogramming in plant and animal development", Science, 330, pp.622~627 (2010)
  9. Formosa T, "The role of FACT in making and breaking nucleosomes", Biochim Biophys Acta, 1819, pp.247~255 (2012)
  10. Gehring M, "DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation", Cell, 124, pp.495~506 (2006)
  11. Grossniklaus U, "Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis", Science, 280, pp.446~450 (1998)
  12. Haig D, "Genomic imprinting in endosperm: its effect on seed development in crosses between species, and between different ploidies of the same species, and its implications for the evolution of apomixis", Phil Trans R Soc Lond B, 333, pp.1~14 (1991)
  13. He YF, "Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA", Science, 333, pp.1303~1307 (2011)
  14. Hsieh TF, "Genome-wide demethylation of Arabidopsis endosperm", Science, 324, pp.1451~1454 (2009)
  15. Ibarra CA, "Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes", Science, 337, pp.1360~1364 (2012)
  16. Ikeda Y, "Plant imprinted genes identified by genome-wide approaches and their regulatory mechanisms", Plant Cell Physiol, 53, pp.809~816 (2012)
  17. Ikeda Y, "DNA demethylation: a lesson from the garden", Chromosoma, 118, pp.37~41 (2009)
  18. Ikeda Y, "HMG domain containing SSRP1 is required for DNA demethylation and genomic imprinting in Arabidopsis", Dev Cell, 21, pp.589~596 (2011)
  19. Ito S, "Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine", Science, 333, pp.1300~1303 (2011)
  20. Jullien PE, "DNA methylation dynamics during sexual reproduction in Arabidopsis thaliana", Curr Biol, 22, pp.1825~1830 (2012)
  21. Kakutani T, "Epi-alleles in plants: Inheritance of epigenetic information over generations", Plant Cell Physiol, 43, pp.106~1111 (2002)
  22. Kinoshita T, "Genomic imprinting: a balance between antagonistic roles of parental chromosomes", Semin. Cell Dev Biol, 19, pp.574~579 (2008)
  23. Kinoshita T, "One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation", Science, 303, pp.521~523 (2004)
  24. Kinoshita T, "Imprinting of the MEDEA polycomb gene in the Arabidopsis endosperm", Plant Cell, 11, pp.1945~1952 (1999)
  25. Lauria M, "Extensive maternal DNA hypomethylation in the endosperm of Zea mays", Plant Cell, 16, pp.510~522 (2004)
  26. 이인혜, "Regulation of Abiotic Stress Response Through NtROS2a-mediated Demethylation in Tobacco", Plant Breeding and Biotechnology, 3(2), pp.108~118 (2015), 한국육종학회[DOI]
  27. Martinez-Macias MI, "A DNA 3'phosphatase functions in active DNA demethylation in Arabidopsis", Mol Cell, 45, pp.357~370 (2012)
  28. Mok YG, "Domain structure of the DEMETER 5-methylcytosine DNA glycosylase", Proc Natl Acad Sci USA, 107, pp.19225~19230 (2010)
  29. Moore T, "Genomic imprinting in mammalian development: a parental tug-of-war", Trends Genet, 7, pp.45~49 (1991)
  30. Mosher RA, "Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis", Nature, 460, pp.283~286 (2009)
  31. Nathan RR, "Understanding the relationship between DNA methylation and histone lysine methylation", Biochimica et Biophysica Acta, 1839, pp.1362~1372 (2014)
  32. Oakeley EJ, "Developmental changes in DNA methylation of the two tobacco pollen nuclei during maturation", Proc Natl Acad Sci USA, 94, pp.11721~11725 (1997)
  33. Ono A, "A null mutation of ROS1a for DNA demethylation in rice is not transmittable to progeny", Plant J, 71, pp.564~574 (2012)
  34. Penterman J, "DNA demethylation in the Arabidopsis genome", Proc Natl Acad Sci USA, 104, pp.6752~6757 (2007)
  35. Qian W, "A histone acetyltransferase regulates active DNA demethylation in Arabido psis", Science, 336, pp.1445~1448 (2012)
  36. Saze H, "DNA methylation in plants: relationship to small RNAs and histone modifications, and functions in transposon inactivation", Plant Cell Physiol, 53, pp.766~784 (2012)
  37. Schoft VK, "Function of the DEMETER DNA glycosylase in the Arabidopsis thaliana male gametophyte", Proc Natl Acad Sci USA, 108, pp.8042~8047 (2011)
  38. Schoft VK, "Induction of RNA-directed DNA methylation upon decondensation of constitutive heterochromatin", EMBO Rep, 10, pp.1015~1021 (2009)
  39. Scott BR, "Interpreting the language of histone and DNA modifications", Biochimica et Biophysica Acta, 1839(8), pp.627~643 (2014)
  40. Slotkin RK, "Epigenetic reprogramming and small RNA silencing of transposable elements in pollen", Cell, 136, pp.461~472 (2009)
  41. Teixeira FK, "A role for RNAi in the selective correction of DNA methylation defects", Science, 323, pp.1600~1604 (2009)
  42. Wohrmann HJ, "Identification of a DNA methylation-independent imprinting control region at the Arabidopsis MEDEA locus", Genes Dev, 26, pp.1837~1850 (2012)
  43. Wu X, "Fbxl10", Kdm2b recruits polycomb repressive complex 1 to CpG islands and regulates H2A ubiquitylation, 2013, pp.49, 1134~1146
  44. Zhu JK, "Active DNA demethylation mediated by DNA glycosylases", Annu Rev Genet, 43, pp.143~166 (2009)

관련 논문AI추천

이 간행물의 다른 논문 (13건)