본문 바로가기
KERD
논문KCI 등재

Molecular Cloning and Characterization of a Novel Cold-Adapted Family VIII Esterase from a Biogas Slurry Metagenomic Library

2

조회

0

다운로드

1

인용

0

참고문헌

키워드

주제분류생물학

초록

A novel esterase gene, est01, was successfully unearthed from a biogas digester microbiota metagenomic library. The 1,194 bp est01 gene encodes a protein of 44,804 Da (designated Est01). The amino acid sequence of Est01 shows only moderate (33%) identity to a lipase/ esterase. Phylogenetic analysis and biochemical characterization confirmed that Est01 is a new member of family VIII esterases. The purified Est01 from recombinant Escherichia coli BL21 (DE3) showed high hydrolytic activity against short-chain fatty acid esters, suggesting that it is a typical carboxylesterase rather than a lipase. Furthermore, the Est01 was even active at 10°C (43% activity remained), with the optimal temperature at 20°C, and had a broad pH range from 5.0 to 10.0, with the optimal pH of 8.0. These properties suggest that Est01 is a cold-adaptive esterase and could have good potential for low-temperature hydrolysis application.

Abstract

A novel esterase gene, est01, was successfully unearthed from a biogas digester microbiota metagenomic library. The 1,194 bp est01 gene encodes a protein of 44,804 Da (designated Est01). The amino acid sequence of Est01 shows only moderate (33%) identity to a lipase/ esterase. Phylogenetic analysis and biochemical characterization confirmed that Est01 is a new member of family VIII esterases. The purified Est01 from recombinant Escherichia coli BL21 (DE3) showed high hydrolytic activity against short-chain fatty acid esters, suggesting that it is a typical carboxylesterase rather than a lipase. Furthermore, the Est01 was even active at 10°C (43% activity remained), with the optimal temperature at 20°C, and had a broad pH range from 5.0 to 10.0, with the optimal pH of 8.0. These properties suggest that Est01 is a cold-adaptive esterase and could have good potential for low-temperature hydrolysis application.

참고문헌 (23)

  1. Arpigny JL, "Bacterial lipolytic enzymes:classification and properties", Biochem J, 343, pp.177~183 (1999)
  2. Aurilia V, "Microbial carbohydrate esterases in cold adapted environments", Gene, 410, pp.234~240 (2008)
  3. Bradford MM., "A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding", Anal. Biochem, 72, pp.248~254 (1976)
  4. Cheng XJ, "Screening of microbial community in biogas fermentation under low temperature and construction of its metagenome library", China Biotechnol, 30, pp.50~55 (2010)
  5. Cheng XJ, "Subtilase genes diversity in the biogas digester microbiota", Curr. Microbiol, 62, pp.1542~1547 (2011)
  6. Elend C, "Isolation and biochemical characterization of two novel metagenome-derived esterases", Appl. Environ. Microbiol, 72, pp.3637~3645 (2006)
  7. Ellis EM., "Microbial aldo-keto reductases", FEMS Microbiol. Lett, 216, pp.123~131 (2002)
  8. Finn RD, "The pfam protein families database", Nucleic Acids Res, 36, pp.281~288 (2008)
  9. Handelsman J., "Metagenomics: application of genomics to uncultured microorganisms", Microbiol. Mol. Biol. Rev, 68, pp.669~685 (2004)
  10. Heath C, "Identification of a novel alkaliphilic esterase active at low temperatures by screening a metagenomic library from antarctic desert soil", Appl. Environ. Microbiol, 75, pp.4657~4659 (2009)
  11. Hu XP, "A novel, extremely alkaliphilic and cold-active esterase from Antarctic desert soil", Extremophiles, 16, pp.79~86 (2012)
  12. Joris B, "The active-site-serine penicillin-recognizing enzymes as members of the Streptomyces R61 DD-peptidase family", Biochem. J, 250, pp.313~324 (1988)
  13. Kim YH, "Molecular cloning and characterization of a novel family viii alkaline esterase from a compost metagenomic library", Biochem. Biophys. Res. Commun, 393, pp.45~49 (2010)
  14. Knox JR, "Molecular evolution of bacterial β-lactam resistance", Chem. Biol, 3, pp.937~947 (1996)
  15. Laemmli UK, "Cleavage of structural proteins during the assembly of the head of bacteriophage T4", Nature, 227, pp.680~685 (1970)
  16. Larkin MA, "Clustal W and Clustal X version 2. 0", Bioinformatics, 23, pp.2947~2948 (2007)
  17. Ranjan R, "Isolation of novel lipolytic genes from uncultured bacteria of pond water", Biochem. Biophys. Res. Commun, 335, pp.57~65 (2005)
  18. Rashamuse K, "A novel family VIII carboxylesterase derived from a leachate metagenome library exhibits promiscuous β-lactamase activity on nitrocefin", Appl. Microbiol. Biotechnol, 83, pp.491~500 (2009)
  19. Rhee SK, "Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays", Appl. Environ. Microbiol, 70, pp.4303~4317 (2004)
  20. Roh C, "Isolation of a low-temperature adapted lipolytic enzyme from uncultivated microorganism", J. Appl. Microbiol, 105, pp.116~123 (2008)
  21. Steele HL, "Advances in recovery of novel biocatalysts from metagenomes", J. Mol. Microbiol. Biotechnol, 16, pp.25~37 (2009)
  22. Tamura K, "MEGA4:molecular evolutionary genetics analysis (MEGA) software version 4.0", Mol. Biol. Evol, 24, pp.1596~1599 (2007)
  23. Zhang T, "Gene cloning and characterization of a novel esterase from activated sludge metagenome", Microb. Cell Fact, 8, pp.67~ (2009)

관련 논문AI추천

A Novel Esterase from a Marine Metagenomic Library Exhibiting Salt Tolerance AbilityHui Peng, Jingjing Li, Quan Wang, Wei Fang, Xuecheng Zhang, Yazhong Xiao, Zeming Fang한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2014 · 제24권 제6호Cloning and Characterization of Carboxylesterase (est2R) Gene from Cow Rumen Metagenomic Library김훈, 강태호, 김기환, 김민근, 김정호, 김태영, 윤한대농업생명과학연구원 · 농업생명과학연구2012 · 제46권 제3호Molecular Cloning, Purification, and Characterization of a Cold-Adapted Esterase from Photobacterium sp. MA1-3김동근, 김영옥, 남보혜, 안철민, 이상주, 지영주, 허유리한국수산과학회 · Fisheries and Aquatic Sciences2013 · 제16권 제4호독도 심해토 메타게놈 유래 신규 내열성 에스테라아제의 생화학적 특성규명김동헌, 김수연, 서소현, 송재은, 심준수, 윤상홍, 이창묵, 한범수한국미생물·생명공학회 · 한국미생물·생명공학회지2017 · 제45권 제1호Isolation and Characterization of a Novel Triolein Selective Lipase from Soil Environmental Genes박수율, 임희경, 한예진, 함문선, 황인택한국미생물·생명공학회 · 한국미생물·생명공학회지2020 · 제48권 제4호Biochemical Characterization of a GDSL-Motif Esterase from Bacillus sp. K91 with a New Putative Catalytic MechanismBo Xu, Junjun Li, Junmei Ding, Junpei Zhou, Lianming Liang, Tingting Yu, YUN-JUAN YANG, Zhenrong Xie, ZUN-XI HUANG한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2014 · 제24권 제11호

이 간행물의 다른 논문 (11건)