독도 심해토 메타게놈 유래 신규 내열성 에스테라아제의 생화학적 특성규명
Biochemical Characterization of a Novel Thermostable Esterase from the Metagenome of Dokdo Islets Marine Sediment
2
조회
0
다운로드
1
인용
0
참고문헌
키워드
초록
A functional screen of 60,672 fosmid metagenomic clones amplified from marine sediment obtained from the Dokdo islets in Korea identified the gene EstES1, whose product, EstES1, displayed lipolytic properties on tributyrin-supplemented media. EstES1 is a 576 amino acid protein with a predicted molecular weight of 59.4 kDa including 37 N-terminal leader amino acids. EstES1 exhibited the highest sequence similarity (44%) to a carboxylesterase found in Haliangium ochraceum DSM14365. Phylogenetic analysis indicated that EstES1 belongs to a currently uncharacterized family of lipases. Within the conserved domain, EstES1 retains the catalytic triad that consists of the consensus penta-peptide motif, GESAG. EstES1 demonstrated a broad substrate specificity toward the long acyl group of ethyl esters (C2−C12), and its optimal activity was recorded toward p-Nitrophenyl butyrate (C4) at pH 9.0 and 40℃ (specific activity of 255.4 U/mg). The enzyme remained stable in the ranges of 60−65℃ and pH 9.0-10.5 and in the presence of methanol, ethanol, isopropanol, and dimethyl sulfoxide. Therefore, EstES1 has potential for use in industrial applications involving high temperature, organic solvents, and/or alkaline conditions.
Abstract
A functional screen of 60,672 fosmid metagenomic clones amplified from marine sediment obtained from the Dokdo islets in Korea identified the gene EstES1, whose product, EstES1, displayed lipolytic properties on tributyrin-supplemented media. EstES1 is a 576 amino acid protein with a predicted molecular weight of 59.4 kDa including 37 N-terminal leader amino acids. EstES1 exhibited the highest sequence similarity (44%) to a carboxylesterase found in Haliangium ochraceum DSM14365. Phylogenetic analysis indicated that EstES1 belongs to a currently uncharacterized family of lipases. Within the conserved domain, EstES1 retains the catalytic triad that consists of the consensus penta-peptide motif, GESAG. EstES1 demonstrated a broad substrate specificity toward the long acyl group of ethyl esters (C2−C12), and its optimal activity was recorded toward p-Nitrophenyl butyrate (C4) at pH 9.0 and 40℃ (specific activity of 255.4 U/mg). The enzyme remained stable in the ranges of 60−65℃ and pH 9.0-10.5 and in the presence of methanol, ethanol, isopropanol, and dimethyl sulfoxide. Therefore, EstES1 has potential for use in industrial applications involving high temperature, organic solvents, and/or alkaline conditions.
참고문헌 (22)
- Anbu P, "Microbial enzymes and their applications in industries and medicine 2014", Biomed. Res. Int, 2015, pp.816419~ (2015)
- Bornscheuer UT, "Microbial carboxyl esterases: classification, properties and application in biocatalysis", FEMS Microbiol. Rev, 26, pp.73~81 (2002)
- Lopez-Lopez O, "New extremophilic lipases and esterases from metagenomics", Curr. Protein. Pept. Sci, 15, pp.445~455 (2014)
- Arpigny JL, "Bacterial lipolytic enzymes: classification and properties", Biochem J, 343(Pt 1), pp.177~183 (1999)
- Chu X, "Identification of two novel esterases from a marine metagenomic library derived from South China Sea", Appl. Microbiol. Biotechnol, 80, pp.615~625 (2008)
- 이창묵, "Burkholderia denitrificans sp. nov., Isolated from the Soil of Dokdo Island, Korea", The Journal of Microbiology, 50(5), pp.855~859 (2012), 한국미생물학회[DOI]
- Peng Q, "A novel esterase gene cloned from a metagenomic library from neritic sediments of the South China Sea", Microb. Cell Fact, 10, pp.95~ (2011)
- Virk, Antar Puneet, "A New Esterase, Belonging to Hormone-Sensitive Lipase Family, Cloned from Rheinheimera sp. Isolated from Industrial Effluent", Journal of Microbiology and Biotechnology, 21(7), pp.667~674 (2011), 한국미생물·생명공학회
- Haki GD, "Developments in industrially important thermostable enzymes: a review", Bioresour. Technol, 89, pp.17~34 (2003)
- Seo S, "Characterization of a novel cold-active esterase isolated from swamp sediment metagenome", World J. Microbiol. Biotechnol, 30, pp.879~886 (2013)
- Kim SJ, "Characterization of a gene encoding cellulase from uncultured soil bacteria", FEMS Microbiol. Lett, 282, pp.44~51 (2008)
- Ma HG, "Marine natural products sourced from marine-derived Penicillium fungi", J. Asian Nat. Prod. Res, 18, pp.92~115 (2016)
- Alma'abadi AD, "Marine metagenome as a resource for novel enzymes", Genomics Proteomics Bioinformatics, 13, pp.290~295 (2015)
- Petersen TN, "SignalP 4.0: discriminating signal peptides from transmembrane regions", Nat. Methods, 8, pp.785~786 (2011)
- Emanuelsson O, "Locating proteins in the cell using TargetP, SignalP and related tools", Nat. Protoc, 2, pp.953~971 (2007)
- Hanes CS, "Studies on plant amylases. The effect of starch concentration upon the velocity of hydrolysis by the amylase of germinated barley", Biochem. J, 26, pp.1406~1421 (1932)
- Wang B, "Characterization of a novel highly thermostable esterase from the Gram-positive soil bacterium Streptomyces lividans TK64", Biotechnol. Appl. Biochem, 63, pp.334~343 (2016)
- Zhang T, "Expression and characterization of a new thermostable esterase from Clostridium thermocellum", Appl. Biochem. Biotechnol, 177, pp.1437~1446 (2015)
- Zhu Y, "Characterization of a new and thermostable esterase from a metagenomic library", Microbiol. Res, 168, pp.589~597 (2013)
- Rhee JK, "New thermophilic and thermostable esterase with sequence similarity to the hormone-sensitive lipase family, cloned from a metagenomic library", Appl. Environ. Microbiol, 71, pp.817~825 (2005)
- Tirawongsaroj P, "Novel thermophilic and thermostable lipolytic enzymes from a Thailand hot spring metagenomic library", J. Biotechnol, 133, pp.42~49 (2008)
- Ghanem A, "Application of lipases in kinetic resolution of racemates", Chirality, 17, pp.1~15 (2005)
