Detection of Plasmodium vivax by Nested PCR and Real-Time PCR
2
조회
0
다운로드
1
인용
0
참고문헌
키워드
초록
Malaria is endemic in the Cukurova region while it is sporadic in other regions of Turkey. Therefore, the laboratory and clinical diagnosis of malaria is important for the treatment of malaria. In this study, 92 blood samples that were taken from the suspected malaria patients for routine diagnosis in a period of 10 years between 1999 and 2009 were analyzed. All of these blood samples were examined by microscopic examinations using Giemsa-stained thick blood films,nested PCR, and real-time PCR. The sensitivity-specificity and positive-negative predictive values for these diagnostic tests were then calculated. It was found that the positive predictive values of microscopic examination of thick blood films,nested PCR, and real-time PCR were 47.8%, 56.5%, and 60.9% for malaria, respectively. The real-time PCR was found to have a specificity of 75% and sensitivity of 100%, while specificity and sensitivity of nested PCR was found 81.2% and 97.7% according to the microscopic examination of thick blood films, respectively.
Abstract
Malaria is endemic in the Cukurova region while it is sporadic in other regions of Turkey. Therefore, the laboratory and clinical diagnosis of malaria is important for the treatment of malaria. In this study, 92 blood samples that were taken from the suspected malaria patients for routine diagnosis in a period of 10 years between 1999 and 2009 were analyzed. All of these blood samples were examined by microscopic examinations using Giemsa-stained thick blood films,nested PCR, and real-time PCR. The sensitivity-specificity and positive-negative predictive values for these diagnostic tests were then calculated. It was found that the positive predictive values of microscopic examination of thick blood films,nested PCR, and real-time PCR were 47.8%, 56.5%, and 60.9% for malaria, respectively. The real-time PCR was found to have a specificity of 75% and sensitivity of 100%, while specificity and sensitivity of nested PCR was found 81.2% and 97.7% according to the microscopic examination of thick blood films, respectively.
참고문헌 (23)
- Aslan G, "The diagnosis of malaria and identification of Plasmodium species by polymerase chain reaction in Turkey", Parasitology Int, 56, pp.217~220 (2007)
- Zeyrek YF, "Parasite density and serum cytokine levels in Plasmodium vivax malaria in Turkey", Parasite Immunol, 28, pp.201~207 (2006)
- Sundar S, "Laboratory diagnosis of visceral leishmaniasis", Clin Diagn Lab Immunol, 9, pp.951~958 (2002)
- Farcas GA, "Real-time polymerase chain reaction assay for the rapid detection and characterization of chloroquine-resistant Plasmodium falciparum malaria in returned travelers", Clin Infect Dis, 42, pp.622~627 (2006)
- Boonma P, "Comparison of three molecular methods for the detection and speciation of Plasmodium vivax and Plasmodium falciparum", Malar J, 6, pp.124~ (2007)
- Schneider P, "Real-time nucleic acid sequence-based amplification is more convenient than real-time PCR for quantification of Plasmodium falciparum", J Clin Microbiol, 43, pp.402~405 (2005)
- Veron V, "Multiplex real-time PCR detection of Plasmodium falciparum, P. vivax and P. malariae in human blood samples", Exp Parasitol, 121, pp.346~351 (2009)
- Snounou G, "High sensitivity of detection of human malaria parasites by the use of nested polymerase chain reaction", Mol Biochem Parasitol, 61, pp.315~320 (1993)
- Gama BE, "Real-time PCR versus conventional PCR for malaria parasite detection in low-grade parasitemia", Exp Parasitol, 116, pp.427~432 (2007)
- McKenzie FE, "Dependence of malaria detection and species diagnosis by microscopy on parasite density", Am J Trop Med Hyg, 69, pp.372~376 (2003)
- Safeukui I, "Evaluation of FRET real-time PCR assay for rapid detection and differentiation of Plasmodium species in returning travelers and migrants", Malar J, 7, pp.70~ (2008)
- Andrews L, "Quantitative real-time polymerase chain reaction for malaria diagnosis and its use in malaria vaccine clinical trials", Am J Trop Med Hyg, 73, pp.191~198 (2005)
- Elsayed S, "Use of molecular beacon probes for real-time PCR detection of Plasmodium falciparum and other Plasmodium species in peripheral blood specimens", J Clin Microbiol, 44, pp.622~624 (2006)
- Vo TK, "Evaluation of a real-time PCR assay for malaria diagnosis in patients from Vietnam and in returned travelers", Trans R Soc Trop Med Hyg, 101, pp.422~428 (2007)
- Farcas GA, "Evaluation of the Real- Art Malaria LC real-time PCR assay for malaria diagnosis", J Clin Microbiol, 42, pp.636~638 (2004)
- Perandin F, "Development of a real-time PCR assay for detection of Plasmodium falciparum, Plasmodium vivax, and Plasmodium ovale for routine clinical diagnosis", J Clin Microbiol, 42, pp.1214~1219 (2004)
- Gurukumar KR, "Development of real-time PCR for detection and quantitation of dengue viruses", Virol J, 6, pp.10~ (2009)
- Cropley IM, "Rapid diagnosis of falciparum malaria by using the ParaSight F test in travellers returning to the United Kingdom: prospective study", Br Med J, 321, pp.484~485 (2000)
- Mills CD, "Evaluation of a rapid and inexpensive dipstick assay for the diagnosis of Plasmodium falciparum malaria", Bull World Health Organ, 77, pp.553~559 (1999)
- Alker AP, "Rapid real-time PCR genotyping of mutations associated with sulfadoxine-pyrimethamine resistance in Plasmodium falciparum", Antimicrob Agents Chemother, 48, pp.2924~2929 (2004)
- Lee MA, "Real time fluorescence-based PCR for detection of malaria parasites", J Clin Microbiol, 40, pp.4343~4345 (2002)
- Mangold KA, "Real-time PCR for detection and identification of Plasmodium spp", J Clin Microbiol, 43, pp.2435~2440 (2005)
- Keen J, "Real-time PCR assay for rapid detection and analysis of PfCRT haplotypes of chloroquine-resistant Plasmodium falciparum isolates from India", J Clin Microbiol, 45, pp.2889~2893 (2007)
