Genetic Distances for Intra- and Between-Group of Scapharca subcrenata from Yeosu of the Korea
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The oligonucleotides polymers (ON-polymers) were used producing a total of 110 loci unique to each clam population (LUECP) in group one and 132 in group two, respectively, varying in amount of DNA fragments (FRs) from greater than near 50 to a smaller quantity than 1,050 bp. The larger FR amounts (>1,050 bp) are not noticed in the two Scapharca subcrenata groups. The ON-polymer OPD-01 produced 33 LUECP, which were defining each group, almost 300 bp, 450 bp, and 500 bp, in the group one. The OPD-15 recognized 22 loci shared by the two clam populations (Loci shared by the two clam populations, LSTCP), a variety of FRs of sizes 300 bp that were equivalent in all specimens. The mean number of LUECP was varied and 1.2-fold greater in the shellfish group two than in the group one. Respecting mean bandsharing (BS) grade outcomes, entities in the shellfish group one (0.779±0.011) had a little higher BS grades than did entities from the group two (0.756±0.009) (p<0.05). The entities of the shellfish group one are not tightly gathered with other entities of the group two. The genetic distance (GD) (0.422) of this invertebrate (SUBCRENATA 02 and 01) is 7.41-fold hereditarily distinct to the GD (0.057) of the other invertebrate (SUBCRENATA 22 and 19). The polar dendrogram (PDG) procured by the five ON-polymers underlines two characteristic groups.
Abstract
The oligonucleotides polymers (ON-polymers) were used producing a total of 110 loci unique to each clam population (LUECP) in group one and 132 in group two, respectively, varying in amount of DNA fragments (FRs) from greater than near 50 to a smaller quantity than 1,050 bp. The larger FR amounts (>1,050 bp) are not noticed in the two Scapharca subcrenata groups. The ON-polymer OPD-01 produced 33 LUECP, which were defining each group, almost 300 bp, 450 bp, and 500 bp, in the group one. The OPD-15 recognized 22 loci shared by the two clam populations (Loci shared by the two clam populations, LSTCP), a variety of FRs of sizes 300 bp that were equivalent in all specimens. The mean number of LUECP was varied and 1.2-fold greater in the shellfish group two than in the group one. Respecting mean bandsharing (BS) grade outcomes, entities in the shellfish group one (0.779±0.011) had a little higher BS grades than did entities from the group two (0.756±0.009) (p<0.05). The entities of the shellfish group one are not tightly gathered with other entities of the group two. The genetic distance (GD) (0.422) of this invertebrate (SUBCRENATA 02 and 01) is 7.41-fold hereditarily distinct to the GD (0.057) of the other invertebrate (SUBCRENATA 22 and 19). The polar dendrogram (PDG) procured by the five ON-polymers underlines two characteristic groups.
참고문헌 (28)
- Araneda C, "Identification of a dominant SCAR marker associated with colour traits in coho salmon(Oncorhynchus kisutch)", Aquaculture, 247, pp.67~73 (2005)
- Dixon BA, "Genetic characterization of populations of the ectoparasitic caligid, Lepeophtheirus salmonis(Krøyer 1837)using randomly amplified polymorphic DNA", Aquac Res, 35, pp.730~741 (2004)
- Esselman EJ, "RAPD marker diversity within and divergence among species of Dendroseris(Asteraceae : Lactuceae)", Am J Bot, 87, pp.591~596 (2000)
- García G, "Genetic differentiation among annual fishes of the genus Cynolebias(Cyprinodontiformes, Rivuluidae)in a biosphere reserve site from Uruguay", Environ Biol Fishes, 70, pp.247~256 (2004)
- Gelin A, "Species identification and ecological study of the genus Palaemonetes(Decapoda : Caridea)in the French Mediterranean", J Crust Biol, 26, pp.124~133 (2006)
- Godhe A, "Comparison of three common molecular tools for distinguishing among geographically separated clones of the diatom Skeletonema marinoi Sarno et Zingone(Bacillariophyceae)", J Phycol, 42, pp.280~291 (2006)
- Huang BX, "Analysis of genetic structure of blacklip abalone(Haliotis rubra)populations using RAPD, minisatellite and microsatellite markers", Mar Biol, 136, pp.207~216 (2000)
- 강서경, "Geographic Variations of Three Fulvia mutica Populations", The Korean Journal of Malacology, 29(3), pp.163~169 (2013), 한국패류학회[DOI]
- 김현정, "보성 연안해역에서 꼬막과 새꼬막 부유유생 출현의 변화", 환경생물, 37(3), pp.351~361 (2019), 한국환경생물학회[DOI]
- Kim SK, "Phylogenetic relationship among Haliotis spp. distributed in Korea by the RAPD analysis", Korean J Genet, 22, pp.43~49 (2000)
- ChangkyunKim, "Genetic Diversity and Relationship in Korean Ginseng(Panax schinseng) Based on RAPD Analysis", Genes & Genomics, 25(3), pp.1~188 (2003), 한국유전학회
- 윤종만, "Genetic Variation in Geographic Crayfish (Cambaroides similis) Populations", 한국어병학회지, 19(2), pp.141~153 (2006), 한국어병학회
- 김성연, "여자만 새꼬막 Scapharca subcrenata의 생식소 발달과 생식주기", 한국양식학회지, 21(4), pp.252~258 (2008), 한국양식학회
- 김영식, "Genetic Distances in Two Gracilaria Species (Gracilariaceae, Rhodophyta) Identified by PCR Technique", 발생과 생식, 22(4), pp.393~402 (2018), 한국발생생물학회
- Koh TL, "Genetic diversity among wild forms and cultivated varieties of discus (Symphysodon spp.) as revealed by random amplified polymorphic DNA (RAPD) fingerprinting", Aquaculture, 173, pp.485~497 (1999)
- Lee JH, "A study on sexual maturation of the ark shell, Scapharca subcrenata Lischke", Korean J Malacol, 14, pp.91~102 (1998)
- Liu Y, "Analysis of genetic variation in surviving apple shoots following cryopreservation by vitrification", Plant Sci, 166, pp.677~685 (2004)
- 오현, "Genetic Distances of Three Mollusk Species Investigated by PCR Analysis", 발생과 생식, 18(1), pp.43~49 (2014), 한국발생생물학회
- 신순범, "전남 여자만 해수 및 새꼬막(Scapharca subcrenata)의 세균학적 위생 평가", 수산해양교육연구, 28(5), pp.1435~1443 (2016), 한국수산해양교육학회
- Yamazaki Y, "Detection of hybrids between masu salmon Oncorhynchus masou masou and amago salmon O. m. ishikawae occurred in the Jinzu river using a random amplified polymorphic DNA technique", Fish Sci, 71, pp.320~326 (2005)
- Yan J, "RAPD and microsatellite analysis of diploid gynogens from allotetraploid hybrids of red crucian carp(Carassius auratus)× common carp(Cyprinus carpio)", Aquaculture, 243, pp.49~60 (2005)
- Jong-Man Yoon, "Genetic Differences within and between Populations of Korean Catfish (S. asotus) and Bullhead (P. fulvidraco) Analysed by RAPD-PCR", Animal Bioscience, 17(8), pp.1053~1061 (2004), 아세아·태평양축산학회
- Yoke-Kqueen C, "Random amplified polymorphic DNA analysis of genetically modified organisms", J Biotechnol, 127, pp.161~166 (2006)
- 윤종만, "Genetic Differences and Geographic Variation in Cuttle Fish (Sepia esculenta Hoyle)", 발생과 생식, 14(3), pp.163~170 (2010), 한국발생생물학회
- 윤종만, "Genetic Variations of Intra- and between-razor Clam Solen corneus Population Identified by PCR Analysis", 발생과 생식, 22(2), pp.193~198 (2018), 한국발생생물학회
- 윤종만, "Genetic Distances Within-Population and Between-Population of Tonguesole, Cynoglossus spp. Identified by PCR Technique", 발생과 생식, 23(3), pp.297~304 (2019), 한국발생생물학회
- 윤종만, "Genetic Differences in Natural and Cultured River Pufferfish Populations by PCR Analysis", 발생과 생식, 24(4), pp.327~335 (2020), 한국발생생물학회
- Zhou L, "Analysis of genetic heterogeneity among five gynogenetic clones of silver crucian carp, Carassius auratus gibelio Bloch, based on detection of RAPD molecular markers", Cytogenet Cell Genet, 88, pp.133~139 (2000)
