DNA 분자를 보호할 수 있는 HFE-7100 용매 유사체들의 유기금속 착 화합물 생성 반응성
Formation Reactivity on the Organometallic Complexes of HFE-7100 Solvent Analogues That Can Protect a DNA Molecule
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Ether계 HFE-7100 용매분자(R1-X-R2; R1=CH3) 중 헤테로(X) 원자가 서로 다른 4종의 유사체(A; ether, B; amine, C; thioether 및 D; disulfide)들에 대한 금속 착 화합물의 DNA 분자보호 조건들을탐색하기 위하여 경계분자궤도함수(FMO) 이론에 적용한 전산화학적인 연구결과는 다음과 같다. 리간드(L; ligand) 분자로서 4종의 유사체(A-D)는 헤테로(X) 원자의 음하전 크기(X: NH≫O> S>S2>S1) 의 순서로 2차 amine 분자가 제일 높은 금속 착화합물 화 반응성을 나타내었다. R2-치환체와 금속염(ZnCl2 및 CuCl2)과의 착화합물 화 반응성은 전자밀게(σI< 0)인 alkyl group (1-7)이 전자끌게(σI> 0)인fluoroalkyl group (8-14)보다 약 1.3배 높았다. 금속 착화합물 화 반응 및 DNA 가수분해 반응성에 관한FMO에너지 도표 분석결과로부터 수화된 금속 착 화합물([ZnLn(H2O)n]2+)내 물 분자의 숫자(NWM) 가 증가함에 따라서 DNA분자의 가수분해 반응성이 증가하였다. 그러나 methyl t-butylamine (B7) 의 비 수화된 금속 착 화합물(Zn(L)6)이나 EDTA분자가 DNA분자를 보호할 수 있음을 시사하였다. 또한, HFE-7100용매의 대체물질로는 me-too approach 방법에 따라서 2차 amine (B)계 methyl nnonafluorobutyl amine (B12) 및 그의 이성질체(B13)가 선택되었다.
Abstract
To search the protect conditions of DNA molecule and the formation reactivity on the metal complexes of hetero atom (X) in HFE-7100 solvent molecule (R1-X-R2; R1=CH3) as ether family compound differ from 4 analogues (A; ether, B; amine, C; thioether, & D; disulfide), the results from the applied to the frontier molecular orbital (FMO) theory in computational chemistry studies were as followings. The secondary amine molecules showed the most highest complexation reactivity in order of negative charge scale (X: NH≫ O>S>S2>S1) of hetero atoms (X) in 4 analogues (A-D). The metal complexations between R2-substituents as ligand (L) molecules and metal salt (ZnCl2 & CuCl2) are processed based on the inductive effect (σI) by R2-substituents, and the alkyl groups (1-7) as electron donor (σI<0) ca. 1.3 times higher than the fluoroalkyl groups (8-14) as electron withdrawing (σI>0) in R2-substituents. From the FMO energy diagram on the znic complexation of 4 analogues and decomposition reaction of DNA molecule, the hydrolysis reactivity of DNA molecule increased in a fairly constant manner as the number of the water molecules (NWM) in metal aqua complexes ([ZnLn(H2O)n]2+) increases. But all the results suggested that the non-hydrated metal complex (Zn(L)6) with methyl t-butylamine (B7) or EDTA molecule can protect a DNA molecule. And HFE-7100 solvent molecule can be substituted that it was selected the methyl n-nona fluorobutylamine (B12) and their isomer (B13) as secondary amine (B) family by me-too approach.
참고문헌 (52)
- H Faulds, "On the skin-furrows of the hand", Nature, 22, pp.605~ (1880)
- H Faulds, "On the Identification of habitual criminals by fingerprints", Nature, 50, pp.548~ (1894)
- SP Kasper, "Latent Print Processing Guide" (2016), Academic Press
- JW Bond, "The value of DNA evidence in detecting crime", J Forensic Sci, 52, pp.128~136 (2007)
- JJ Raymond, "Trace evidence characteristics of DNA : A preliminary investigation of the persistence of DNA at crime scenes", FIS Genetics, 4(1), pp.26~33 (2009)
- S Clark, "Chemical detection of latent fingerprints", J Chem Educ, 70, pp.593~595 (1993)
- GS Sodhi, "Chemical methods for developing latent fingerprints", J Chem Educ, 76(4), pp.488A~ (1999)
- R Jelly, "The detection of latent fingerprint on porous surfaces using amino acids sensitive reagents; A Review", Anal Chim Acta, 652, pp.128~142 (2009)
- RAH van Oorschot, "Forensic trace DNA: A review", Investig Genet, 1, pp.14~ (2010)
- TJ Verdon, "Evaluation of tapelifting as a collection method for touch DNA", FIS Genetics, 8(1), pp.179~186 (2014)
- J Almog, "Dual fingerprint reagents with enhanced sensitivity: 5-methoxy- and 5-methylthionin hydrin", J For Sci, 53(2), pp.364~368 (2008)
- MM Joullie, "Ninhydrin and ninhydrin analogue. Syntheses and applications", Tetrahedron, 47(42), pp.8791~8830 (1991)
- JJR Frausto da Silva, "The chelate effect redefined", J Chem Educ, 60(5), pp.390~ (1983)
- 최미정, "총설: DNA 감식에 미치는 잠재지문 현출시약들에 의한 금속이온과유기용매의 영향", 과학수사학회지, 11(1), pp.1~17 (2017), 한국과학수사학회[DOI]
- 서경숙, "몇 가지 식용색소를 이용한 Cyanoacrylate 훈증 현출지문의 개선에 미치는 색 대비효과", 과학수사학회지, 10(2), pp.97~106 (2016), 한국과학수사학회[DOI]
- 조재현, "식용색소를 이용한 비다공성 재질 상 현출지문의 색 대비효과 및 이미지 개선", 과학수사학회지, 10(3), pp.202~210 (2016), 한국과학수사학회[DOI]
- "How to Calculate the Stoichiometric Ratio" (2017)[URL]
- Chem Buddy, "Stoichiometric Ratio", University of North Carolina, Chapel Hill
- G Palermo, "Catalytic metal ions and enzymatic processing of DNA and RNA", Acc Chem Res, 48(2), pp.220~228 (2015)
- A Sreedhara, "Catalytic hydrolysis of DNA by metal ions and complexes", J Biol Inorg Chem, 6(4), pp.337~347 (2001)
- 홍주은, "이중성 지문시약으로서 Ruhemann’s Purple 화합물과 그 금속이온착 화합물의 생성 반응성 및 DNA분자 보호 가능성", 과학수사학회지, 12(2), pp.69~79 (2018), 한국과학수사학회[DOI]
- W Grzybkowski, "Nature and properties of metal cations in aqueous solutions", Polish J Environ Stud, 15(40), pp.655~663 (2006)
- DF Hewlett, "The ninhydrin process in supercritical carbon dioxide", J Forensic Sci, 41(3), pp.487~489 (1996)
- P Kirsch, "Modern Fluoroorganic Chemistry; Synthesis, Reactivity, Application" (2004), Wiley-VCH Verlag GmbH &Co. KGaA.
- 3M, "3M™ Novec™ 7100 Engineered Fluid, Product Information", 3M Electronics Markets Materials Division, ~ (2017)
- W Abdallah, "Fundamentals of wettability", Oilfield Review, 19(2), pp.44~61 (2007)
- NR Morrow, "Wettability and its effect on oil recovery", J Petroleum Technol, 42(12), pp.1476~1484 (1990)
- 엄창용, "습윤지수에 관한 QSPR 모델로 예측된 불소치환 비활성 용매 중에서 Dansyl 방법의 잠재지문 현출 효율성", 과학수사학회지, 10(1), pp.28~37 (2016), 한국과학수사학회[DOI]
- N Chapman, "Advances in Linear Free Energy Relationships" (1972), Springer. Plenum Press
- QSPR Modeling:Fundamental Concepts, "Primer on QSAR", pp.2015, K Roy
- 성낙도, "1-(phenoxymethyl)benzotriazole 유도체 중methylene 양성자의 chemical shift에 관한 자유에너지관계의 조성과 용매의존성", 대한화학회지, 33(5), pp.538~544 (1989)
- CJ Cramer, "Essentials of Computational Chemistry" (2005), John Wiley & Sons
- I Fleming, "Molecular Orbitals and Organic Chemical Reactions. Ch 3" (2010), John-Wiely and Sons
- LG Zhuo, "A frontier molecular orbital theory approach to understanding the Mayr equation and to quantifying nucleophilicity and electrophilicity by using HOMO and LUMO energies", Asian J Org Chem, 1, pp.336~345 (2012)
- JH kim, "Dimethylphosphate hydrolysis at neutral pH", J Am Chem Soc, 114(25), pp.9792~9795 (1992)
- P Imhof, "Density functional theory analysis of dimethylphosphate hydrolysis : effect of solvation and nucleophile variation", J Molecular Structure: THEOCHEM, 713(1-3), pp.1~5 (2005)
- C Hansch, "Substituents Constants for Correlation Analysis in Chemistry and Biology" (1979), John Wiely & Sons, Inc
- "ACD", ChemSketch (Freeware) ver 14.0
- A Leo, "Octanol LogP. Exploring QSAR, Hydrophobic, Electronic, and Steric Constants" (1995), Am Chem Soc
- CD Johnson, "The Hammett Equation" (1980), Cambridge Univ Press
- NB Chapman, "Correlation Analysis in Chemistry;Recent Advances" (1978), Plenum Press
- MH Rausch, "Density, surface tension, and kinematic viscosity of hydrofluoroethers HFE-7000, HFE-7100, HFE-7200, HFE-7300, and HFE-7500", J Chem Eng Data, 60(12), pp.3759~3765 (2015)
- SM Bleay, "Fingerprint Development Techniques; Theory and Application", pp.230~235 (2018), John Wiley & Sons
- 나윤주, "DNA 분자를 보호할 수 있는 HFE-7100 용매 유사체들의 유기금속 착 화합물 생성 반응성", 석사, pp.2019
- MB Smith, "March’s Advanced Organic Chemistry;Reactions, Mechanisms and Structure", pp.229~230 (2013), John Wiely & Sons Inc
- OG Parchment, "Speciation in aqueous zinc chloride, an ab initio hybride microsolvation", continuum approach, 1996, pp.100(23), 9689~9693
- HD Kaesz, "Hydride complexes of the transition metals", Chem Rev, 72(3), pp.231~281 (1972)
- SF Lincoln, "Metal Aqua Ions. Comprehensive Coordination Chemistry II, Vol 1", pp.515~555 (2003), Elsevier Ltd
- NV Hud, "In Nucleic Acid-Metal Ion Interactions. Sequence-specific DNA–Metal Ion Interactions", pp.75~117 (2008), Royal Society of Chemistry Publishing
- "Technical Procedure for Zinc Chloride-HFE-7100. Version 2", Digital, 31, pp.2013. Issued by Digital, Latent Forensic Scientist Manager[DOI]
- OM Loreille, "High efficiency DNA extraction from bone by total demineralization", Forensic Sci Int‘l Genetics, 1, pp.191~195 (2007)
