본문 바로가기
KERD
논문KCI 등재후보

Understanding SARS-CoV-2 Variants and Safety Countermeasures for the Fight against Omicron

3

조회

0

다운로드

0

인용

0

참고문헌

키워드

주제분류기타사회과학

초록

Purpose: This study examines the mutation profiles and global prevalence of SARS-Cov-2 variants. We further investigate the viral characteristics of the Delta and Omicron variants, such as epidemiology and transmissibility, disease severity, immune escape and vaccine effectiveness. Moreover, safety countermeasures for the fight against the Omicron variant are explored regarding the new pandemic response strategies focused on medical response and COVID-19 guidelines for quarantine rules. Method: This study was conducted on Web-based searches about the latest updates COVID-19 from the World Health Organization, Korea Centers for Disease Control and Prevention, and the Ministry of Food and Drug Safety. In addition, we searched for the ‘SARS-CoV-2 variant”, and “COVID-19 and Delta, or Omicron” in PubMed and then reviewed the selected articles regarding variants of concern, the Delta and Omicron variants. Results: To date, there are five variants of concern available on the WHO tracking SARS-CoV-2 variants website. The Delta and Omicron variants are of particular concern among variants, and the Omicron variant is rapidly out-pacing the Delta variant worldwide to become the dominant circulating variant with a substantial growth ad-vantage having a shorter doubling time. Even though the Omicron variant has shown moderate and lower disease severity than the Delta variant, there is concern about the high possibility of immune evasion, and it is predicted to be the most prevalent variant in the Republic of Korea near future. Therefore, safety countermeasures to contain the spread of the Omicron variant will be implemented for gradual recovery to a new normal life. Conclusion: Accordingly, along with the domestic efforts such as encouraging third booster vaccination and maintaining high-level quarantine systems, international collaboration, clear and transparent communications, and even achievement of 70% coverage with COVID-19 vaccines in all countries will be necessary to battle against the SARS-CoV-2 variants and to stop the continuous prevalence of Omicron worldwide.

Abstract

Purpose: This study examines the mutation profiles and global prevalence of SARS-Cov-2 variants. We further investigate the viral characteristics of the Delta and Omicron variants, such as epidemiology and transmissibility, disease severity, immune escape and vaccine effectiveness. Moreover, safety countermeasures for the fight against the Omicron variant are explored regarding the new pandemic response strategies focused on medical response and COVID-19 guidelines for quarantine rules. Method: This study was conducted on Web-based searches about the latest updates COVID-19 from the World Health Organization, Korea Centers for Disease Control and Prevention, and the Ministry of Food and Drug Safety. In addition, we searched for the ‘SARS-CoV-2 variant”, and “COVID-19 and Delta, or Omicron” in PubMed and then reviewed the selected articles regarding variants of concern, the Delta and Omicron variants. Results: To date, there are five variants of concern available on the WHO tracking SARS-CoV-2 variants website. The Delta and Omicron variants are of particular concern among variants, and the Omicron variant is rapidly out-pacing the Delta variant worldwide to become the dominant circulating variant with a substantial growth ad-vantage having a shorter doubling time. Even though the Omicron variant has shown moderate and lower disease severity than the Delta variant, there is concern about the high possibility of immune evasion, and it is predicted to be the most prevalent variant in the Republic of Korea near future. Therefore, safety countermeasures to contain the spread of the Omicron variant will be implemented for gradual recovery to a new normal life. Conclusion: Accordingly, along with the domestic efforts such as encouraging third booster vaccination and maintaining high-level quarantine systems, international collaboration, clear and transparent communications, and even achievement of 70% coverage with COVID-19 vaccines in all countries will be necessary to battle against the SARS-CoV-2 variants and to stop the continuous prevalence of Omicron worldwide.

참고문헌 (48)

  1. Barton FH, "A New Vaccine to Battle Covid-19", The New England Journal of Medicine, 384(5), pp.470~471 (2020)
  2. 김명류, "Current Status of COVID-19 Outbreak and Vaccination in the Republic of Korea", International Journal of Crisis & Safety, 6(3), pp.34~44 (2021), J-INSTITUTE
  3. Park IN, "Stepwise Strategy of Social Distancing in Korea", Journal of Korean Medical Science, 35(28), pp.n264~ (2020)
  4. 박균열, "COVID-19 and Some Implications to AI", Robotics & AI Ethics, 5(1), pp.16~24 (2020), J-INSTITUTE
  5. Dongwon Kim, "Government Roles in Policy Networks against COVID-19: Comparing Two Cases in S. Korea", Protection Convergence, 5(2), pp.14~26 (2020), J-INSTITUTE
  6. 조홍제, "Human Security Task and Prospect on COVID-19 Pandemic", International Journal of Terrorism & National Security, 5(2), pp.48~55 (2020), J-INSTITUTE
  7. 이상수, "Paradox of COVID-19 Pandemic, Strengthening Neo-Liberalist's Way of GLOBAL GOVERNANCE Building to Overcome Vaccine Nationalism's Politics", Regulations, 6(2), pp.1~9 (2021), J-INSTITUTE
  8. Harvey WT, "SARS-CoV-2 Variants, Spike Mutations and Immune Escape", Nature Review Microbiology, 19(7), pp.409~424 (2021)
  9. Callaway E, "The Coronavirus is Mutating-Does it Matter?", Nature, 585(7824), pp.174~177 (2020)
  10. Rambaut A, "A Dynamic Nomenclature Proposal for SARS-CoV-2 Lineages to Assist Genomic Epidemiology", Nature Microbiology, 5(11), pp.1403~1407 (2001)
  11. Harrison AG, "Mechanisms of SARS-CoV-2 Transmission and Pathogenesis", Trends in Immunology, 41(12), pp.1100~1115 (2020)
  12. Du L, "The Spike Protein of SARS-CoV-a Target for Vaccine and Therapeutic Development", Nature Reviews in Microbiology, 7(3), pp.226~236 (2009)
  13. Public Health England, "Investigation of novel SARS-CoV-2 variant", ~ (2021)
  14. Davies NG, "Estimated Transmissibility and Impact of SARS-CoV-2 Lineage B.1.1.7 in England", Science, 372(6538), pp.n3055~ (2021)
  15. Starr TN, "Deep Mutational Scanning of SARS-CoV-2 Receptor Binding Domain Reveals Constraints on Folding and ACE2 Binding", Cell, 182(5), pp.1295~1310 (2020)
  16. Groves DC, "The D614G Mutations in the SARS-CoV-2 Spike Protein : Implications for Viral Infectivity, Disease Severity and Vaccine Design", Biochemical and Biophysical Research Communications, 538, pp.104~107 (2021)
  17. Korber B, "Tracking Changes in SARS-CoV-2 Spike : Evidence that D614G Increases Infectivity of the Covid-19 Virus", Cell, 182(4), pp.812~827 (2020)
  18. Peacock TP, "The Furin Cleavage Site in the SARS-CoV-2 Spike Protein is Required for Transmission in Ferrets", Nature Microbiology, 6(7), pp.899~909 (2021)
  19. Tegally H, "Detection of a SARS-CoV-2 Variant of Concern in South Africa", Nature, 592(7854), pp.438~443 (2021)
  20. Khan A, "Higher Infectivity of the SARS-CoV-2 New Variants is Associated with K417N", T, E484K, and N501Y Mutants: An Insight from Structural Data, 2021, pp.236(10), 7045~7057
  21. Ramanathan M, "SARS-CoV-2 B.1.1.7 and B.1.351 Spike Variants Bind Human ACE2 with Increased Affinity", The Lancet Infectious Diseases, 21(8), pp.n1070~ (2021)
  22. Faria NR, "Genomics and Epidemiology of the P.1 SARS-CoV-2 Lineage in Manaus, Brazil", Science, 372(6544), pp.815~821 (2021)
  23. Sabino EC, "Resurgence of Covid-19 in Manaus, Brazil, Despite High Seroprevalence", Lancet, 397(10273), pp.452~455 (2021)
  24. on the Efficacy of Subunit Recombinant Vaccines, "The Braziian Journal of Infectious Diseases", 2021, n101606~
  25. Deng X, "Transmission, Infectivity, and Neutralization of a Spike L452R SARS-CoV-2 Variant", Cell, 184(13), pp.3426~3437 (2021)
  26. Chen J, "Mutations Strengthened SARS-CoV-2 infectivity", Journal of Molecular Biology, 432(19), pp.5212~5226 (2020)
  27. Davis C, "Reduced Neutralisation of the Delta (B.1.617.2) SARS-CoV-2 Variant of Concern Following Vaccination", Plos Pathogens, 17(12), pp.n1010022~ (2021)
  28. Kupferschmidt K, "Delta Variant Triggers New Phase in the Pademic", Science, 372(6549), pp.1375~1376 (2021)
  29. Hu J, "Increased Immune Escape of the New SARS-CoV-2 Variant of Concern Omicron", Cellular and Molecular Immunology, 19, pp.293~295 (2022)
  30. Kampen JJA, "Duration and Key Determinants of Infectious Virus Shedding in Hospitalized Patients with Coronavirus Disease-2019(Covid-19)", Nature Communicaitons, 12(1), pp.267~ (2021)
  31. Rossler A, "SARS-CoV-2 B.1.1.529 Variant (Omicron) Evades Neutralization by Sera from Vaccinated and Convalescent Individuals", New England Journal of Medicine, 386, pp.698~700 (2022)
  32. Redd AD, "Minimal Cross-over Between Mutations associated with Omicron Variant of SARS-CoV-2 and CD8+ T Cell Epitopes Identified in Covid-19 Convalescent Individuals", BioRxiv, n34909772~ (2021)
  33. Kim P, "Duration of SARS-CoV-2 Natural Immunity and Protection against the Delta Variant: A Retrospective Cohort Study", Clinical Infectious Disease, 999, pp.1~6 (2021)
  34. Cele S, "Omicron Extensively but Incompletely Escapes Pfizer BNT162b2 Neutralization", Nature, 602, pp.654~663 (2021)
  35. Nguyen KH, "Report of Health Care Provider Recommendation for Covid-19 Vaccination Among Adults, by Recipient Covid-19 Vaccination Status and Attitudes", Morbidity and Mortality Weekly Report, 70(50), pp.1723~1730 (2021)
  36. Gruell H, "mRNA Booster Immunization Elicits Potent Neutralizing Serum Activity Against the SARS-CoV-2 Omicron Variant", Nature Medicine, 8373, pp.1~4 (2022)
  37. Gupta RK, "Will SARS-CoV-2 Variants of Concern Affect the Promise of Vaccines?", Nature Reviews Immunology, 21(6), pp.340~341 (2021)
  38. Callaway E, "Beyond Omicron : What’s Next for Covid’s Viral Evolution", Nature, 600(7888), pp.204~207 (2021)

관련 논문AI추천

SARS-CoV-2 Omicron Variant of Concern: Everything You Wanted to Know about Omicron but Were Afraid to Ask최준용, Davey M. Smith, Dong Hoon Shin연세대학교의과대학 · Yonsei Medical Journal2022 · 제63권 제11호SARS-CoV-2 Variants of Concern최준용, Davey M. Smith연세대학교의과대학 · Yonsei Medical Journal2021 · 제62권 제11호Current Status of COVID-19 Outbreak and Vaccination in the Republic of Korea김명류, 홍복실, Jueun Kwon동북아학술저널연합 · International Journal of Crisis & Safety2021 · 제6권 제3호SARS-CoV-2 Omicron Mutation Is Faster than the Chase: Multiple Mutations on Spike/ACE2 Interaction Residues김수현, 송창선, 전현정, Choi Yang Kyu, Kim Byoungguk, Kim Sinae, Kim Sung-Han, Kim Yong-Gil, Lee Youngmin, Netea Mihai, Nguyen Tam T., Park Ho-Young, Shin Kyeong-Cheol, Song Eun Young, Taitt Afeisha S., Yeom Su Cheong, Yum Hokee대한면역학회 · Immune Network2021 · 제21권 제6호SARS-CoV-2 Delta (B.1.617.2) Variant: A Unique T478K Mutation in Receptor Binding Motif (RBM) of Spike Gene김수현, 박호영, 송창선, 전현정, Hisham Yasmin대한면역학회 · Immune Network2021 · 제21권 제5호Rapid Emergence of the Omicron Variant of Severe Acute Respiratory Syndrome Coronavirus 2 in KoreaKim Eun-Jin, Kim Heui Man, Kim Il-Hwan, Kim Jeong-Ah, Lee Chae Young, Lee Hyeokjin, Lee Jaehee, Lee Nam-Joo, Park Ae Kyung, Rhee JeeEun, Woo SangHee, Yoo Cheon-Kwon대한진단검사의학회 · Annals of Laboratory Medicine2023 · 제43권 제2호

이 간행물의 다른 논문 (7건)