Genetic diversity of traditional Korean cattle breeds based on microsatellite polymorphisms
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참고문헌
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초록
This study was conducted to elucidate the genetic relationships among native Korean cattlebreeds by analyzing genetic variations and distances. Relationships among Hanwoo, Koreanbrindle, Korean black, Jeju black, and Holstein cattle were evaluated using 15 microsatellitemarkers. Korean brindle and Korean black cattle had the closest relationship based on thelowest genetic distance being observed between these breeds. A Neighbor-Net tree created usingthe Reynolds distances indicated that Korean brindle and black cattle formed a group separatefrom the Hanwoo population. However, an Fst pairwise test revealed that Hanwoo, Koreanbrindle, and Korean black cattle differed significantly (P <0.01). Moreover, the results of thisstudy confirmed that Jeju black cattle became a separate established breed in Korea through apath different from that of cattle from inland regions, even though it is considered to be aKorean native breed. Overall, the results of our study indicate that Korean brindle and blackcattle are indeed native Korean breeds that maintain an endangered status.
Abstract
This study was conducted to elucidate the genetic relationships among native Korean cattlebreeds by analyzing genetic variations and distances. Relationships among Hanwoo, Koreanbrindle, Korean black, Jeju black, and Holstein cattle were evaluated using 15 microsatellitemarkers. Korean brindle and Korean black cattle had the closest relationship based on thelowest genetic distance being observed between these breeds. A Neighbor-Net tree created usingthe Reynolds distances indicated that Korean brindle and black cattle formed a group separatefrom the Hanwoo population. However, an Fst pairwise test revealed that Hanwoo, Koreanbrindle, and Korean black cattle differed significantly (P <0.01). Moreover, the results of thisstudy confirmed that Jeju black cattle became a separate established breed in Korea through apath different from that of cattle from inland regions, even though it is considered to be aKorean native breed. Overall, the results of our study indicate that Korean brindle and blackcattle are indeed native Korean breeds that maintain an endangered status.
참고문헌 (31)
- Baker, C. M. A., "Chemical classification of cattle. I. Breed group", Anim. Blood. Groups. Bi, 11, pp.127~150 (1980)
- Baumung, R., "Genetic diversity studies in farm animals - a survey", J. Anim. Breed. Genet, 121, pp.361~373 (2004)
- Beja-Pereira, A., "Genetic characterization of Southwestern European bovine breeds : A historical and biogeographical reasessment with a set of 16 microsatellites", J. Hered, 94, pp.243~250 (2003)
- Boom, R., "Rapid and simple method for purification of nucleic acids", J. Clin. Microbiol, 28, pp.495~503 (1990)
- Bryant, D., "NeighborNet: An agglomerative method for the construction of phylogenetic networks", Mol. Biol. Evol, 21, pp.255~265 (2004)
- Cañón, J., "Genetic diversity measures of local European beef cattle breeds for conservation purposes", Genet. Sel. Evol, 33, pp.311~332 (2001)
- Cockerham, C. C., "Estimation of gene-flow from F-statistics", Evolution, 47, pp.855~863 (1993)
- endemic to Morocco, "Theor. Appl. Genet", 1996, 832~839
- Felsenstein, J., "PHYLIP. Version. 3.67" (2007), Department of Genetics, University of Washington
- "FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3)" (2001)[URL]
- Hanslik, S., "Microsatellite analysis reveals substantial genetic differentiation between contemporary New World and Old World Holstein Friesian populations", Anim. Genet, 31, pp.31~38 (2000)
- Huson, D. H., "Application of Phylogenetic Networks in Evolutionary Studies", Mol. Biol. Evol, 23, pp.254~267 (2006)
- Kang, S. W., "Hanwoo", pp.35~36 (2008), Association for research on Hanwoo
- Kim, K. S., "Genetic Diversity of Korean Cattle using Microsatellite Analysis", J. Anim. Sci. & Technol, 43, pp.599~608 (2001)
- Kim, K. S., "Genetic diversity of north-east Asian cattle based on microsatellite data", Anim. Genet, 33, pp.201~204 (2002)
- 이성수, "칡소와 비경흑색 한우의 Melanocortin Receptor 1 (MC1R)유전자형 분석", 한국동물자원과학회지, 44(1), pp.23~30 (2002), 한국동물자원과학회
- Mateus, J. C., "Genetic diversity and differentiation in Portuguese cattle breeds using microsatellites", Anim. Genet, 35, pp.106~113 (2004)
- Mohanty, T. R., "Molecular variation in pigmentation genes contributing to coat colour in native Korean Hanwoo cattle", Anim. Genet, 39, pp.550~553 (2008)
- Na, K. J., "Characteristics of Hanwoo", Monthly Animal Improve, 13, pp.42~52 (2008)
- Nei, M., "Molecular Evolutionary Genetics" (1987), Columbia Univ
- Park, S. D. E., "Trypanotolerane in West African cattle and the population genetic effects of selection", 박사, pp.2001
- Pandey, A. K., "Genetic diversity studies of Kherigarh cattle based on microsatellite markers", Jpn. J. Genet, 85, pp.117~122 (2006)
- Reynolds, J., "Estimation of the coancestry coefficient Basis for a short-term genetic distance", Genetics, 105, pp.767~779 (1983)
- Schearf, B., "World Watch List for Domestic Animal Diversity" (2003), FAO
- Seo, K., "Biology of epidermal and hair pigmentation in cattle: a mini-review", Vet. Dermatol, 18, pp.392~400 (2007)
- Sunnucks, P., "Efficient genetic markers for population biology", Tree, 15, pp.199~203 (2001)
- Takezaki, N., "Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA", Genetics, 144, pp.389~399 (1996)
- Weir, B. S., "Genetic data analysis Ⅱ: methods for discrete population genetic data" (1996), Sunderland
- Wiener, P., "Breed relationships and definition in British cattle: a genetic analysis", Heredity, 93, pp.597~602 (2004)
- Yoon, D. H., "Molecular genetic diversity and development of genetic markers in association with meat quality for Hanwoo (Korean cattle)", 박사, Department of Animal Sciences, pp.2002
- 윤두학, "Microsatellite loci 분석에 의한 한우와 타 품종간의 유전적 유연관계", 한국동물자원과학회지, 47(3), pp.341~354 (2005), 한국동물자원과학회
