본문 바로가기
KERD
논문KCI 등재

친환경 농업을 위한 농업 분야 유용미생물 확보·연구 현황 및 이에 따른 농산물 선도관리 방안 탐색

Current state of nationally secured or researched beneficial microorganisms for developing environment-friendly agriculture practice and exploration of alternative indication for sustaining freshness

1

조회

0

다운로드

2

인용

0

참고문헌

키워드

초록

본 연구에서는 농업 분야 유용미생물 자원의 국가적 확보 현황을 파악하기 위해 이들의 생물분류학적정보를 수집하였으며 이들에 대해 생물 종 다양성 지수를 도입하여 평가하였다. 대표적인 생물다양성평가방법인 Margalef’s richness 및 Mehinick’s index를 각각 적용한 경우 세균은 각각 8.537, 3.546,진균은 각각 3.349, 2.167의 값을 나타내었다. 높은 수준의 다양성을 가지고 연구·개발되고 있는 이들농업 분야 유용미생물 및 농산물의 수확 후 선도저하를 유발한다고 보고된 주요 미생물들의 분류학적위치를 비교하였을 때 일부 미생물이 유사한 분류학적 위치를 보이는 것이 확인되었다. 따라서 친환경농업 분야 유용미생물의 연구개발 및 작물 내생 미생물에 관한 연구 등 농업 분야 미생물에 대한 전반적인 연구현황을 고찰하여 농산물의 수확 후 선도관리를 위한 보완책을 제시하고자 하였다.

Abstract

In this study, the securing state of nationally indicated beneficial microbial resources wasevaluated in an aspect of bio-diversity using their taxonomical information. Depending on theanalysis result with the Margalef's richness or the Mehinick’s index which are representativebio-diversity analytical indices, species diversity values was revealed as 8.537, 3.546 withinbacterial resources, 3.349, 2.167 within fungal resources. Several developed or researchedbeneficial strains and spoilage microbes showed relative taxonomical relationship withcomparation of their biological information. As a result, we propose the necessity orcountermeasure method for preventing the microbial spoilage with the overhauling considerationof advanced research on agricultural microbiology covering crop endophyte beneficial/spoilagemicroorganisms.

참고문헌 (94)

  1. AIB(American Institute of Baking) international, "Consolidated standards for inspection agricultural crops", AIB international, 18~19 (2014)
  2. Alwakeel SS, "Molecular identification of isolated fungi from stored apples in Riyadh, Saudi", Saudi J. Biol. Sci, 20(4), pp.311~317 (2013)
  3. Angulo VC, "Characterization of growth-promoting rhizobacteria in Eucalyptus nitens seedlings", Rev. Argent. Microbiol, 46(4), pp.338~347 (2014)
  4. Bakhshandeh E, "Phosphate solubilization potential and modeling of stress tolerance of rhizobacteria from rice paddy soil in northern Iran", World J. Microbiol. Biotechnol, 30(9), pp.2437~2447 (2014)
  5. Bamba R, "Co-occurrence of aflatoxin B(1) and cyclopiazonic acid in sour lime (Citrus aurantifolia Swingle) during post-harvest pathogenesis by Aspergillus flavus", Mycopathologia, 159, pp.407~411 (2005)
  6. Banhara A, "Colonization of root cells and plant growth promotion by Piriformospora indica occurs independently of plant common symbiosis genes", Front. Plant Sci (2015)
  7. Bharti N, "Halotolerant PGPRs prevent major shifts in indigenous microbial community structure under salinity stress", Microb. Ecol, 70(1), pp.196~208 (2015)
  8. BRC(British retail consortium), "Global standard for food safety", BRC international, 27~24 (2011)
  9. Camele I, "In vitro control of post-harvest fruit rot fungi by some plant essential oil components", Int. J. Mol. Sci, 13, pp.2290~2300 (2012)
  10. Carvalho CR, "The diversity, antimicrobial and anticancer activity of endophytic fungi associated with the medicinal plant Stryphnodendron adstringens (Mart.) Coville (Fabaceae) from the Brazilian savannah", Symbiosis, 57(2), pp.95~107 (2012)
  11. Chaverri P, "Systematics of the Trichoderma harzianum species complex and the re-identification of commercial biocontrol strains", Mycologia, 107(3), pp.558~590 (2015)
  12. Chen Y, "Comparative genomic analysis and phenazine production of Pseudomonas chlororaphis, a plant growth-promoting rhizobacterium", Genom. Data, 4, pp.33~42 (2015)
  13. Choi HK, "Field evaluation of the bacterial volatile derivative 3-pentanol in priming for induced resistance in pepper", J. Chem. Ecol, 40, pp.882~892 (2014)
  14. Delaplace P, "Influence of rhizobacterial volatiles on the root system architecture and the production and allocation of biomass in the model grass Brachypodium distachyon (L.) P. Beauv", BMC Plant Biol, 15, pp.195~209 (2015)
  15. 정유진, "Bacillus oryzicola sp. nov., an Endophytic Bacterium Isolated from the Roots of Rice with Antimicrobial, Plant Growth Promoting, and Systemic Resistance Inducing Activities in Rice", The Plant Pathology Journal, 31(2), pp.152~164 (2015), 한국식물병리학회[DOI]
  16. Dinesh R, "Isolation, characterization, and evaluation of multi-trait plant growth promoting rhizobacteria for their growth promoting and disease suppressing effects on ginger", Microbiol. Res, 173, pp.34~43 (2015)
  17. Dos Banhos EF, "Endophytic fungi from Myrcia guianensis at the Brazilian Amazon: distribution and bioactivity", Braz. J. Microbiol, 45(1), pp.153~161 (2014)
  18. Drogue B, "Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation", Front. Plant Sci (2014)
  19. Eseigbe DA, "Fungi associated with post-harvest rot of black plum (Vitexdoniana) in Nigeria", Mycopathologia, 136(2), pp.109~114 (1996)
  20. Faltin F, "Strategy to select and assess antagonistic bacteria for biological control of Rhizoctonia solani Kühn", Can. J. Microbiol, 50(10), pp.811~820 (2004)
  21. Fernandez NV, "Occurrence of arbuscular mycorrhizas and dark septate endophytes in pteridophytes from a Patagonian rainforest, Argentina", J. Basic Microbiol, 53(6), pp.498~508 (2013)
  22. Glassner H, "Characterization of endophytic bacteria from cucurbit fruits with potential benefits to agriculture in melons (Cucumismelo L.)", FEMS Microbiol. Ecol, 91(7) (2015)
  23. George E, "Characterization of the bioactive metabolites from a plant growth-promoting rhizobacteria and their exploitation as antimicrobial and plant growthpromoting agents", Appl. Biochem. Biotechnol, 176(2), pp.529~546 (2015)
  24. Glaeser SP, "Non-pathogenic Rhizobium radiobacter F4 deploys plant beneficial activity independent of its host Piriformospora indica", ISME J (2015)
  25. Haldar S, "Impact of plant development on the rhizobacterial population of Arachis hypogaea: a multifactorial analysis", J. Basic Microbiol, 55(7), pp.922~928 (2015)
  26. Hussain H, "Microsphaerol and seimatorone: two new compounds isolated from the endophytic fungi, Microsphaeropsis sp. and Seimatosporium sp", Chem. Biodivers, 12(2), pp.289~294 (2015)
  27. Ignatova LV, "Plant growth-promoting and antifungal activity of yeasts from dark chestnut soil", Microbiol. Res, 175, pp.78~83 (2015)
  28. Janisiewicz WJ, "Yeasts associated with plums and their potential for controlling brown rot after harvest", Yeast, 31, pp.207~218 (2014)
  29. Jiang Q, "Complete genome sequence of the plant growth-promoting rhizobacterium Pseudomonas aurantiaca strain JD37", J. Biotechnol, 20, pp.85~86 (2014)
  30. 정순영, "국내에 시판되고 있는 유기농산물과 일반농산물의 부패미생물 분리 및 동정", 한국식품위생안전성학회지, 28(4), pp.306~311 (2013), 한국식품위생안전성학회
  31. Kalita M, "Developing novel bacterial based bioformulation having PGPR properties for enhanced production of agricultural crops", Indian J. Exp. Biol, 53(1), pp.56~60 (2015)
  32. Kang JW, "Bacteria diversity of rhizobia associated with leguminous trees growing in South Korea", J. Basic Microbiol, 53(3), pp.291~298 (2013)
  33. Kang SM, "Gibberellin-producing Serratia nematodiphila PEJ1011 ameliorates low temperature stress in Capsicum annuum L", Eur. J. Soil. Biol, 68, pp.85~93 (2015)
  34. Kang SM, "Plant growth-promoting rhizobacteria reduce adverse effects of salinity and osmotic stress by regulating phytohormones and antioxidants in Cucumis sativus", J. Plant Interact, 9(1), pp.673~682 (2014)
  35. 강상모, "Gibberellin Production by Newly Isolated Strain Leifsonia soli SE134 and Its Potential to Promote Plant Growth", Journal of Microbiology and Biotechnology, 24(1), pp.106~112 (2014), 한국미생물·생명공학회[DOI]
  36. Kang SM, "Enterobacter asburiae KE17 association regulates physiological changes and mitigates the toxic effects of heavy metals in soybean", Plant Biol(Stuttg), 17(5), pp.1013~1022 (2015)
  37. Kefi A, "Characterization of endophytic Bacillus strains from tomato plants (Lycopersicon esculentum) displaying antifungal activity against Botrytis cinerea Pers", World J. Microbiol. Biotechnol, 31(12), pp.1967~1976 (2015)
  38. KMFA(Korea Ministry of food and drug ministry), "Food safety management manuel for open type restaurant", Press of KMFA, 30~31 (2015)
  39. Khan AL, "Plant growth-promoting potential of endophytic fungi isolated from Solanum nigrum leaves", World J. Microbiol. Biotechnol, 31(9), pp.1461~1466 (2015)
  40. Abdul Latif Khan, "Bacterial Endophyte Sphingomonas sp. LK11 Produces Gibberellins and IAA and Promotes Tomato Plant Growth", The Journal of Microbiology, 52(8), pp.689~695 (2014), 한국미생물학회[DOI]
  41. 김중배, "정유를 이용한 환경친화적 수삼 저장병 방제", 식물병 연구, 15(3), pp.236~241 (2009), 한국식물병리학회
  42. Koh YJ, "Post harvest fruit rots of kiwifruit(Actinidia deliciosa) in Korea", N. Z. J. Crop Hortic. Sci, 33, pp.303~310 (2010)
  43. Kown SH, "Identification and characterization of molds isolated from garlic", Ph.D., pp.2008
  44. 이정한, "파프리카 저장병에 관계하는 미생물상과 병원성검정", 농업생명과학연구, 47(5), pp.55~60 (2013), 농업생명과학연구원
  45. 이고은, "Enterococcus faecium LKE12 Cell-Free Extract Accelerates Host Plant Growth via Gibberellin and Indole-3-Acetic Acid Secretion", Journal of Microbiology and Biotechnology, 25(9), pp.1467~1475 (2015), 한국미생물·생명공학회[DOI]
  46. 이솔, "Growth Promotion of Xanthium italicum by Application of Rhizobacterial Isolates of Bacillus aryabhattai in Microcosm Soil", The Journal of Microbiology, 50(1), pp.45~49 (2012), 한국미생물학회
  47. Liang XJ, "Comparative study on distribution of endophytic fungi in Eucommia barks from different habitats", Zhongguo Zhong Yao Za Zhi, 39(2), pp.204~208 (2014)
  48. Li Q, "Biofumigation on post-harvest diseases of fruits using a new volatile-producing fungus of Ceratocystis fimbriata", PLoS One, 10(7) (2015)
  49. Llorente BE, "Biofertilization with Azospirillum brasilense improves in vitro culture of Handroanthus ochraceus, a forestry, ornamental and medicinal plant", N. Biotechnol, 33(1), pp.32~40 (2016)
  50. Lorenzini M, "Characterization and pathogenicity of Alternaria spp. strains associated with grape bunch rot during post-harvest withering", Int. J. Food Microbiol, 186, pp.1~5 (2014)
  51. Lorenzini M, "Occurrence and infection of Cladosporium, Fusarium, Epicoccum and Aureobasidium in withered rotten grapes during post-harvest dehydration", Antonie Van Leeuwenhoek, 108(5), pp.1171~1180 (2015)
  52. Louis B, "Host-range dynamics of Cochliobolus lunatus: from a biocontrol agent to a severe environmental threat", Biomed. Res. Int (2014)
  53. Madigan, "Brock biology of microorganisms" (2011), Pearson Education Asia
  54. Majeed A, "Isolation and characterization of plant growth-promoting rhizobacteria from wheat rhizosphere and their effect on plant growth promotion", Front. Microbiol (2015)
  55. Margalef DR, "Information theory in ecology", Gen. Syst, 3, pp.36~71 (1958)
  56. Mesa J, "Scouting contaminated estuaries: heavy metal resistant and plant growth promoting rhizobacteria in the native metal rhizoaccumulator Spartina maritima", Mar. Pollut. Bull, 90(1-2), pp.150~159 (2015)
  57. Murphy BR, "Fungal root endophytes of a wild barley species increase yield in a nutrient stressed barley cultivar", Symbiosis, 65(1), pp.1~7 (2015)
  58. Naveed M, "Identification and characterization of rhizospheric microbial diversity by 16S ribosomal RNA gene sequencing", Braz. J. Microbiol, 45(3), pp.985~993 (2014)
  59. Noirot P, "Protein interaction networks in bacteria", Curr. Opin. Microbiol, 7(5), pp.505~512 (2004)
  60. Ongeng D, "The efficacy of electrolyzed oxidizing water for inactivating spoilage microorganisms in process water and on minimally processed vegetables", Int. J. Food Microbiol, 109(3), pp.187~197 (2006)
  61. Oslen GJ, "Microbial ecology and evolution: a ribosomal RNA approach", Annu. Rev. Micriboal, 40, pp.337~365 (1986)
  62. Paik SB, "Effect of medicinal plant extracts on apple storage diseases", Korean J. Plant Pathol, 13(1), pp.57~62 (1997)
  63. Park YS, "Promotion of plant growth by Pseudomonas fluorescensstrain SS101 via novel volatile organic compounds", Biochem. Biophys. Res. Commun, 461(2), pp.361~365 (2015)
  64. 박종명, "국가인증 농축산물 유통실태 및 이를 제한하는 법 제도적 규제요인에 관한 연구", 농업생명과학연구, 49(4), pp.283~294 (2015), 농업생명과학연구원[DOI]
  65. Parafati L, "Biocontrol ability and action mechanism of food-isolated yeast strains against Botrytis cinerea causing post-harvest bunch rot of table grape", Food Microbiol, 47, pp.85~92 (2015)
  66. Patil MP, "Biological activities and identification of bioactive metabolite from endophytic Aspergillus flavus L7 isolated from Aegle marmelos", Curr. Microbiol, 71(1), pp.39~48 (2015)
  67. Polonio JC, "Biotechnological prospecting of foliar endophytic fungi of guaco (Mikania glomerata Spreng.) with antibacterial and antagonistic activity against phytopathogens", Genet. Mol. Res, 14(3), pp.7297~7309 (2015)
  68. Rajeshkumar PP, "Diversity, richness and degree of colonizatiom of arbuscular mycorrhizal fungi in coconut cultivated along with intercrops in high productive zone of Kerala, India", Symbiosis, 65(3), pp.125~141 (2015)
  69. Ray RC, "Post harvest spoilage of sweet potato in tropics and control measures", Crit. Rev. Food Sci. Nutr, 45(7-8), pp.623~644 (2005)
  70. Redman RS, "Thermotolerance generated by plant", fungal symbiosis, 2002, pp.298(5598), 1581~
  71. Sahoo RK, "A novel Azotobacter vinellandii (SRIAz3) functions in salinity stress tolerance in rice", Plant Signal Behav, 9(7), pp.e29377~ (2014)
  72. Siddikee, M. A., "Isolation, Characterization, and Use for Plant Growth Promotion Under Salt Stress, of ACC Deaminase-Producing Halotolerant Bacteria Derived from Coastal Soil", Journal of Microbiology and Biotechnology, 20(11), pp.1577~1584 (2010), 한국미생물·생명공학회
  73. Soltani J, "Fungal endophyte diversity and bioactivity in the Mediterranean cypress Cupressus sempervirens", Curr. Microbiol, 70(4), pp.580~586 (2015)
  74. Su F, "Burkholderia phytofirmans PsJN reduces impact of freezing temperatures on photosynthesis in Arabidopsis thaliana", Front. Plant Sci (2015)
  75. Sun L, "Diversity of endophytic fungi associated with Ferula sinkiangensis K. M. Shen", Wei Sheng Wu XueBao, 54(8), pp.36~42 (2014)
  76. Upreti R, "Root-associated bacterial endophytes from Ralstonia solanacearum resistant and susceptible tomato cultivars and their pathogen antagonistic effects", Front. Microbiol (2015)
  77. Waller F, "The endophytic fungus Piriformospora indica reprograms barley to salt stress tolerance, disease resistance, and higher yield", Proc. Natl. Acad. Sci. U. S. A, 102, pp.13386~13391 (2005)
  78. Wang X, "Biocontrol and plant growth-promoting activity of rhizobacteria from Chinese fields with contaminated soils", Microb. Biotechnol, 8(3), pp.404~418 (2015)
  79. Wężowicz K, "The diversity of endophytic fungi in Verbascum lychnitis from industrial areas", Symbiosis, 64(3), pp.139~147 (2014)
  80. White TJ, "PCR protocols: a guide to methods and applications", pp.315~322 (1990), Academic Press
  81. Whittaker RH, "Evolution of species diversity in land communities", Evol. Biol, 10, pp.1~67 (1977)
  82. Woo PCY, "Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories", Clin. Microbiol. Infect, 14(10), pp.908~934 (2008)
  83. Yang B, "Population distribution and antimicrobial activities of endophytes in Toddalia asiatica", Wei Sheng Wu Xue Bao, 54(3), pp.276~284 (2014)
  84. Yin Z, "Phosphate solubilization and promotion of maize growth by Penicillium oxalicum P4 and Aspergillus niger P85 in a calcareous soil", Can. J. Microbiol, 61(12), pp.1~11 (2015)
  85. 유영현, "담수에 자생하는 수생식물에서 분리된 내생균류의 지베렐린 생산과 동정", 한국균학회지, 43(1), pp.71~76 (2015), 한국균학회
  86. Young-Hyun You, "Aspergillus clavatus Y2H0002 as a New Endophytic Fungal Strain Producing Gibberellins Isolated from Nymphoides peltata in Fresh Water", Mycobiology, 43(1), pp.87~91 (2015), 한국균학회
  87. 유영현, "Diversity of Endophytic Fungi Associated with the Roots of Four Aquatic Plants Inhabiting Two Wetlands in Korea", Mycobiology, 43(3), pp.231~238 (2015), 한국균학회
  88. You YH, "Cadophora malorum Cs-8-1 as a new fungal strain producing gibberellins isolated from Calystegia soldanella", J. Basic Microbiol, 53(7), pp.630~634 (2013)
  89. Young-Hyun You, "해안 생태계의 복원을 위하여 독도에 자생하는 식물로부터 분리된 내생진균류의 식물생장촉진활성과 유전학적 다양성", 생명과학회지, 23(1), pp.95~101 (2013), 한국생명과학회[DOI]
  90. Zahid M, "Isolation and identification of indigenous plant growth promoting rhizobacteria from Himalayan region of Kashmir and their effect on improving growth and nutrient contents of maize (Zea mays L.)", Front. Microbiol (2015)
  91. Zawoznik MS, "Search for endophytic diazotrophs in barley seeds", Braz. J. Microbiol, 45(2), pp.621~625 (2014)
  92. Zhuang X, "New advances in plant growth-promoting rhizobacteria for bioremediation", Environ. Int, 33(3), pp.406~413 (2007)
  93. Zhou T, "Development of biocontrol agents from food microbial isolates for controlling post-harvest peach brown rot caused by Monilinia fructicola", Int. J. Food Microbiol, 126(1-2), pp.180~185 (2008)
  94. Zhou Q, "Microscopic distribution and quantitative detection of endophytic fungus Undifilum oxytropis from Oxytropis glabra DC and Astragalus variabilis", Wei Sheng Wu Xue Bao, 54(5), pp.572~581 (2014)

관련 논문AI추천

이 간행물의 다른 논문 (25건)