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화학물질 독성고속대량스크리닝 프로그램 ToxCastTM 분석

ToxCastTM Program for High Throughput Screening ofEnvironmentalChemical Toxicity, a Review

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초록

As the number of new chemicals increases, traditional animal testinghas limitations in evaluating the toxicity of chemicals. In Europe and the United States, the use of non-animal alternative toxicity test methods for chemical regulation is encouraged and related research is actively carried out. In the United States, the ToxCast program is in progress using high-throughput screening (HTS) techniques. The program produced HTS in vitrotest results for 1200 assays and 9000 chemicals to develop chemical toxicity prediction models and set the priorities for toxicity assessment. In this review, we explored the outline of ToxCast, the types of assays used, and the progress of each phase. We also explored how to analyze the numerous toxicity data generated through the ToxCast program, including pre-processing, dose-response model fit, conclusion and categorization. Finally, implications for domestic utilization ofthe ToxCast database are derived.

Abstract

As the number of new chemicals increases, traditional animal testinghas limitations in evaluating the toxicity of chemicals. In Europe and the United States, the use of non-animal alternative toxicity test methods for chemical regulation is encouraged and related research is actively carried out. In the United States, the ToxCast program is in progress using high-throughput screening (HTS) techniques. The program produced HTS in vitrotest results for 1200 assays and 9000 chemicals to develop chemical toxicity prediction models and set the priorities for toxicity assessment. In this review, we explored the outline of ToxCast, the types of assays used, and the progress of each phase. We also explored how to analyze the numerous toxicity data generated through the ToxCast program, including pre-processing, dose-response model fit, conclusion and categorization. Finally, implications for domestic utilization ofthe ToxCast database are derived.

참고문헌 (15)

  1. Annual Report 2015, "American Chemical Society", ~ (2016)
  2. National Research Council, "Toxicity Testing in the 21th Century: A Vision and a Strategy", pp.1~4 (2007)
  3. R. Judson, "In Vitro and Modelling Approaches to Risk Assessment from the U.S. Environmental Protection Agency ToxCastProgramme", Basic & Clinical Pharmacology & Toxicology, 115, pp.69~76 (2014)
  4. "Exploring ToxCast Data: Downloadable Data"[URL]
  5. US Environmental protection agency, "ToxCast Owner's Manual - Guidance for Exploring Data", pp.6~24 (2018)
  6. US Environmental protection agency, "ToxCast Assay Annotation Version 1.0 Data User Guide", 16~32 (2014)
  7. A. M. Richard, "ToxCast Chemical Landscape: Paving the Road to 21st Century Toxicology", Chemical Research in Toxicology, 29, pp.1225~1251 (2016)
  8. K. Houck, "High-Throughput Screening in ToxCast", Tox21, 2014, ~
  9. R Development Core Team, "“R: A language and Environment for Statistical Computing", R Foundation for Statistical Computing, 1, pp.409~ (2011)
  10. D. L. Filer, "tcpl: the ToxCast pipeline for high-throughput screening data", Bioinformatics, 33, pp.618~620 (2017)
  11. D. L. Filer, "The ToxCast™ Analysis Pipeline: An R Package for Processing and Modeling Chemical Screening Data (version 1.2.2)", pp.1~61 (2016)
  12. G. T. Ankley, "Adverse outcome pathways: a conceptual framework to support ecotoxicology research and risk assessment", Environmental Toxicology and Chemistry, 29, pp.730~741 (2010)
  13. D. M. Reif, "Endocrine profiling and prioritization of environmental chemicals using ToxCast data", Environmental Health Perspectives, 118, pp.1714~1720 (2010)
  14. S. W. Marvel, "ToxPi Graphical User Interface 2.0: Dynamic exploration, visualization, and sharing of integrated data models", BMC Bioniformatics, 19, pp.80~ (2018)
  15. "화학물질 등록 및 평가 등에 관한 법률 시행령"[URL]

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