A report of 21 unrecorded bacterial species belonging to the phyla Bacillota and Verrucomicrobiota in Korea
2
조회
0
다운로드
0
인용
0
참고문헌
키워드
초록
During a comprehensive investigation of indigenous prokaryotic species in Korea, 20 and one bacterial strains assigned to the phyla Bacillota and Verrucomicrobiota, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal flat, seawater, sand, sediment, brackish water, and healthy human urine. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with their closest related reported species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 21 isolates in Korea, they - 20 species of four families in two orders of the phylum Bacillota and one species of the phylum Verrucomicrobiota - have been reported as unrecorded species in Korea. In addition, Gram staining, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.
Abstract
During a comprehensive investigation of indigenous prokaryotic species in Korea, 20 and one bacterial strains assigned to the phyla Bacillota and Verrucomicrobiota, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal flat, seawater, sand, sediment, brackish water, and healthy human urine. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with their closest related reported species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 21 isolates in Korea, they - 20 species of four families in two orders of the phylum Bacillota and one species of the phylum Verrucomicrobiota - have been reported as unrecorded species in Korea. In addition, Gram staining, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.
참고문헌 (7)
- Hedlund, B. P, "Phylum XXIII. Verrucomicrobia phyl. nov. Bergey’s manual of systematic bacteriology", pp.79~841 (2010), Springer
- Kumar, S., "MEGA7:molecular evolutionary genetics analysis version 7.0for bigger datasets", Molecular Biology and Evolution, 33, pp.1870~1874 (2016)
- Lee, H. J., "Flavihumibacter solisilvae sp. nov., isolated from forest soil", International Journal of Systematic and Evolutionary Microbiology, 64, pp.2897~2901 (2014)
- Oren, A., "Valid publication of the names of forty-two phyla of prokaryotes", International Journal of Systematic and Evolutionary Microbiology, 71, pp.005056~ (2021)
- Thompson, J. D., "The Clustal_X windows interface:flexible strategies for multiple sequence alignment aided by quality analysis tools", Nucleic Acids Research, 25, pp.4876~4882 (1997)
- Vos, P., "Bergey’s manual of systematic bacteriology:Volume 3: The Firmicutes (Vol. 3)", pp.21~129 (2011), Springer Science &Business Media
- Yoon, S. H., "Introducing EzBioCloud: A taxonomically united database of 16S rRNA and whole genome assemblies", International Journal of Systematic and Evolutionary Microbiology, 67, pp.1613~1617 (2017)