Korean plant proteomics: pioneers in plant stress physiology
1
조회
0
다운로드
1
인용
0
참고문헌
키워드
초록
Plant proteomics is the large-scale studies of proteins, particularly on their structures and functions, governed by the physiological metabolism of plant cells. With the development of techniques and strategies in proteomics,proteomics approach is moving forward in systems biology handling sophisticated components of major signaling and biochemical pathways in plants responding to their environment. In Korea, pioneers in plant proteomics are trying to catch up with global trends in plant proteomics; these researchers are not only improving existing techniques in protein extraction but also developing new techniques in proteomics context. In the hot field of abiotic and biotic stress proteomics, 29 and 9 out of 74 papers have been published during the review period from 2005 to 2010, respectively. This present review article provides an overview on the output of Korean plant proteomers while paying special attention to both abiotic and biotic stress proteomics.
Abstract
Plant proteomics is the large-scale studies of proteins, particularly on their structures and functions, governed by the physiological metabolism of plant cells. With the development of techniques and strategies in proteomics,proteomics approach is moving forward in systems biology handling sophisticated components of major signaling and biochemical pathways in plants responding to their environment. In Korea, pioneers in plant proteomics are trying to catch up with global trends in plant proteomics; these researchers are not only improving existing techniques in protein extraction but also developing new techniques in proteomics context. In the hot field of abiotic and biotic stress proteomics, 29 and 9 out of 74 papers have been published during the review period from 2005 to 2010, respectively. This present review article provides an overview on the output of Korean plant proteomers while paying special attention to both abiotic and biotic stress proteomics.
참고문헌 (52)
- Agrawal GK, "Rejuvenating rice proteomics: facts, challenges and visions", Proteomics, 6, pp.5549~5576 (2006)
- Agrawal GK, "Plant Proteomics: Technologies, Strategies, and Applications" (2008), John Wiley & Sons
- Agrawal GK, "Rice proteomics: ending phase I and the beginning of phase II", Proteomics, 9, pp.935~963 (2009)
- Agrawal GK, "Rice proteomics: A move toward expanded proteome coverage to comparative and functional proteomics uncovers the mysteries of rice and plant biology", Proteomics, 11, pp.1630~1649 (2011)
- Ahsan N, "A comparative proteomic analysis of tomato leaves in response to waterlogging stress", PHYSIOLOGIA PLANTARUM, 131(4), pp.555~570 (2007), BLACKWELL PUBLISHING
- Ahsan N, "Excess copper induced physiological and proteomic changes in germinating rice seeds", CHEMOSPHERE, 67(6), pp.1182~1193 (2007), PERGAMON-ELSEVIER SCIENCE LTD
- Ahsan N, "A proteomic screen and identification of waterlogging-regulated proteins in tomato roots", PLANT AND SOIL, 295(12), pp.37~51 (2007), SPRINGER
- Ahsan N, "Physiological and protein profiles alternation of germinating rice seedlings exposed to acute cadmium toxicity", COMPTES RENDUS BIOLOGIES, 330(10), pp.735~746 (2007), ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER
- Ahsan N, "Comparative proteomic study of arsenic-induced differentially expressed proteins in rice roots reveals glutathione plays a central role during As stress", PROTEOMICS, 8, pp.3561~3576 (2008), WILEY-V C H VERLAG GMBH
- Ahsan N, "Glyphosate-induced oxidative stress in rice leaves revealed by proteomic approach", PLANT PHYSIOLOGY AND BIOCHEMISTRY, 46, pp.1062~1070 (2008), ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER
- Ahsan N, "Analysis of arsenic stress-induced differentially expressed proteins in rice leaves by two-dimensional gel electrophoresis coupled with mass spectrometry", Chemosphere, 78(3), pp.224~231 (2010), Elsevier Limited
- Alam I, "Proteome analysis of soybean roots under waterlogging stress at an early vegetative stage", Journal of Biosciences, 35(1), pp.49~62 (2010), Springer India
- Alam I, "Proteome analysis of soybean roots subjected to short-term drought stress", PLANT AND SOIL, 333(12), pp.491~505 (2010), SPRINGER
- Cánovas FM, "Plant proteome analysis", Proteomics, 4, pp.285~298 (2004)
- Cho SK, "Heterologous expression and molecular and cellular characterization of CaPUB1 encoding a hot pepper U-box E3 ubiquitin ligase homolog", PLANT PHYSIOLOGY, 142, pp.1664~1682 (2006)
- Cho SH, "Proteome analysis of gametophores identified a metallothionein involved in various abiotic stress responses in Physcomitrella patens", PLANT CELL REPORTS, 25, pp.475~488 (2006), Springer
- Chu SH, "Enhanced drought tolerance in Arabidopsis via genetic manipulation aimed at the reduction of glucosamine-induced ROS generation", PLANT MOLECULAR BIOLOGY, 74(4-5), pp.493~502 (2010), SPRINGER
- Heazlewood JL, "Plant Proteomics: Challenges and Resources", Annual Plant Reviews, 28, pp.1~31 (2006)
- 홍성창, "잎들깨 수량과 단백질체 발현에 미치는 UV-B의 영향", 한국환경농학회지, 25(1), pp.7~13 (2006), 한국환경농학회
- Jorrin JV, "Plant proteome analysis: A 2006 update", Proteomics, 7, pp.2947~2962 (2007)
- Jorrin-Novo JV, "Plant proteomics update (2007-2008): Second-generation proteomic techniques, an appropriate experimental design, and data analysis to fulfill MIAPE standards, increase plant proteome coverage and expand biological knowledge", Journal of Proteomics, 72, pp.285~314 (2009)
- Jung YH, "The rice (Oryza sativa) Blast Lesion Mimic Mutant, blm, may confer resistance to blast pathogens by triggering multiple defense-associated signaling pathways", Plant Physiol Biochem, 43, pp.397~406 (2005)
- Jung YH, "Differential expression of defense", stress-related marker proteins in leaves of a unique rice blast lesion mimic mutant (BLM), 2006, pp.5, 2586~2598
- Kamal AHM, "Abiotic stress responsive proteins of wheat grain determined using proteomics technique", CROP SCIENCE, 4, pp.196~208 (2010), CROP SCIENCE SOC AMER
- Kamal AHM, "Proteomics-based dissection of biotic stress responsive proteins in bread wheat (Triticum aestivum L.)", AFRICAN JOURNAL OF BIOTECHNOLOGY, 9(43), pp.7239~7255 (2010), ACADEMIC JOURNALS
- Kim DS, "Proteomic pattern-based analyses of light responses in Arabidopsis thaliana wild-type and photoreceptor mutants", PROTEOMICS, 6, pp.3040~3049 (2006), WILEY-V C H VERLAG GMBH
- Kim HB, "Postembryonic Seedling Lethality in the Sterol-Deficient Arabidopsis cyp51A2 Mutant Is Partially Mediated by the Composite Action of Ethylene and Reactive Oxygen Species", PLANT PHYSIOLOGY, 152, pp.192~205 (2010), AMER SOC PLANT BIOLOGISTS
- Kim JY, "Functional characterization of a glycinerich RNA-binding protein 2 in Arabidopsis thaliana under abiotic stress conditions", Plant J, 50, pp.439~451 (2007)
- Kim ST, "Secretome analysis of differentially induced proteins in rice suspension-cultured cells triggered by rice blast fungus and elicitor", PROTEOMICS, 9, pp.1302~1313 (2009), WILEY-V C H VERLAG GMBH
- Kim YO, "A zinc finger-containing glycine-rich RNA-Binding protein, atRZ-1a, has a negative impact on seed germination and seedling growth of Arabidopsis thaliana under salt or drought stress conditions", PLANT AND CELL PHYSIOLOGY, 48(8), pp.1170~1181 (2007), OXFORD UNIV PRESS
- Kwon SJ, "Role of the methionine sulfoxide reductase MsrB3 in cold acclimation in Arabidopsis", PLANT AND CELL PHYSIOLOGY, 48, pp.1713~1723 (2007)
- Kwon YS, "Proteome analysis of Arabidopsis seedlings exposed to bacterial volatiles", PLANTA, 232, pp.1355~1370 (2010), SPRINGER
- Lee BJ, "Functional study of hot pepper 26S proteasome subunit RPN7 induced by Tobacco mosaic virus from nuclear proteome analysis", BIOCHEM BIOPHYS RES COMMUN, 351, pp.405~411 (2006)
- Lee DG, "A proteomic approach in analyzing heat-responsive proteins in rice leaves", PROTEOMICS, 7, pp.3369~3383 (2007), WILEY-V C H VERLAG GMBH
- Lee DG, "An approach to identify cold-induced low-abundant proteins in rice leaf", COMPTES RENDUS BIOLOGIES, 330(3), pp.215~225 (2007), ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER
- Lee DG, "Chilling stress-induced proteomic changes in rice roots", Journal of Plant Physiology, 166(1), pp.1~11 (2009), Urban und Fischer Verlag GmbH und Co. KG
- Kyunghee Lee, "Identification of Potential DREB2C Targets in Arabidopsis thaliana Plants Overexpressing DREB2C Using Proteomic Analysis", Molecules and Cells, 28(4), pp.383~388 (2009), 한국분자세포생물학회
- Lee K, "Comparative proteomic analysis of the short-term responses of rice roots and leaves to cadmium", JOURNAL OF PLANT PHYSIOLOGY, 167(0), pp.161~168 (2010), ELSEVIER GMBH
- 이상훈, "NDP Kinase 유전자를 과발현시킨 형질전환 톨 페스큐 식물체의 저온 스트레스에 대한 내성 특성", 한국초지학회지, 29(4), pp.299~306 (2009), 한국초지조사료학회
- 이영우, "Glufosinate 처리에 의한 벼(Oryza sativa)의단백질체학적 변화양상 및 작용기작 해석", Weed&Turfgrass Science, 28(2), pp.101~110 (2008), 한국잡초학회
- Oh IS, "Secretome analysis reveals an Arabidopsis lipase involved in defense against Alternaria brassicicola", PLANT CELL, 17, pp.2832~2847 (2005), American Society of Plant Biologists
- Pandey A, "Proteomics to study genes and genomes", Nature, 405, pp.837~846 (2000)
- 백기엽, "Drought effect on electrophoretic protein pattern of Anoectochilus formosanus", SCIENTIA HORTICULTURAE, 107, pp.205~209
- Park MA, "Proteomic identification of toxic volatile organic compound-responsive proteins in Arabidopsis thaliana", Plant Cell Reports, 28, pp.1603~1614 (2009)
- RIM, SOON-OK, "Proteome Analysis of Waito-c Rice Seedlings Treated with Culture Fluid of Gibberellin-producing Fungus, Fusarium proliferatum KGL0401", Journal of Microbiology and Biotechnology, 16(12), pp.1990~1994 (2006), 한국미생물·생명공학회
- Rossignol M, "Analysis of the plant proteome", Curr Opin Biotechnol, 12, pp.131~134 (2001)
- "Plant proteome analysis: A 2004-2006 update", ~
- Rossignol M, "Plant proteome analysis: A 2004-2006 update", Proteomics, 6, pp.5529~5548 (2006)
- Hak-Seung Ryu, "Proteomic analysis of rice mutants susceptible to Magnaporthe oryzae", Plant Biotechnology Reports, 3(2), pp.167~174 (2009), 한국식물생명공학회
- 신평균, "건조 및 저장조건에 따른 쌀 저장단백질의 변화양상", 한국환경농학회지, 27(4), pp.456~459 (2008), 한국환경농학회
- Sixue C, "Advances in plant proteomics", Proteomics, 6, pp.5504~5516 (2006)
- Vítámvás P, "Proteome analysis in plant stress research", Czech J Genet Plant Breed, 43, pp.1~6 (2007)
