Genome-wide scan for runs of homozygosity identifies candidate genes in Wannan Black pigs

키워드

참고문헌 (48)

1. Chen H, "Genome-wide association studies and meta-analysis reveal novel quantitative trait loci and pleiotropic loci for swine head-related traits", J Anim Sci, 95, pp.2354~2366 (2017)[DOI]
2. Maselli V, "A dysfunctional sense of smell : the irreversibility of olfactory evolution in freeliving pigs", Evol Biol, 41, pp.229~239 (2014)[DOI]
3. Novoselova TA, "Expected economic performance of genetic modification in pork production", NJAS-Wageningen J Life Sci, 64-65, pp.9~15 (2013)[DOI]
4. Muhammad H, "Genetic polymorphism among five species of Indus River carps on the basis of random amplified polymorphic DNA(RAPD)analysis", Rend Lincei Sci Fis Nat, 28, pp.73~80 (2017)[DOI]
5. Gorlov IF, "GDF9 gene polymorphism and its association with litter size in two Russian sheep breeds", Rend Lincei Sci Fis Nat, 29, pp.61~66 (2018)[DOI]
6. Forutan M, "Inbreeding and runs of homozygosity before and after genomic selection in North American Holstein cattle", BMC Genomics, 19, pp.98~ (2018)[DOI]
7. Christensen OF, "A bivariate genomic model with additive, dominance and inbreeding depression effects for sire line and three-way crossbred pigs", Genet Sel Evol, 51, pp.45~ (2019)[DOI]
8. 도창희, "The Outcomes of Selection in a Closed Herd on a Farm in Operation", Animal Bioscience, 28(9), pp.1244~1251 (2015), 아세아·태평양축산학회[DOI]
9. Ouborg NJ, "Conservation genetics in transition to conservation genomics", Trends Genet, 26, pp.177~187 (2010)[DOI]
10. Sell-Kubiak E, "Challenges in inbreeding estimation of large populations based on Polish HolsteinFriesian cattle pedigree", J Appl Genet, 59, pp.313~323 (2018)[DOI]
11. Simino J, "Variants on chromosome 6p22. 3 associated with blood pressure in the HyperGEN study : follow-up of FBPP quantitative trait loci", Am J Hypertens, 24, pp.1227~1233 (2011)[DOI]
12. Purfield DC, "Runs of homozygosity and population history in cattle", BMC Genet, 13, pp.70~ (2012)[DOI]
13. Zavarez LB, "Assessment of autozygosity in Nellore cows(Bos indicus)through highdensity SNP genotypes", Front Genet, 6, pp.5~ (2015)[DOI]
14. Kim ES, "Effect of artificial selection on runs of homozygosity in US Holstein cattle", PLoS One, 8, pp.e80813~ (2013)[DOI]
15. Ceballos FC, "Runs of homozygosity : windows into population history and trait architecture", Nat Rev Genet, 19, pp.220~234 (2018)[DOI]
16. Purfield DC, "The distribution of runs of homozygosity and selection signatures in six commercial meat sheep breeds", PLoS One, 12, pp.e0176780~ (2017)[DOI]
17. Metzger J, "Runs of homozygosity reveal signatures of positive selection for reproduction traits in breed and non-breed horses", BMC Genomics, 16, pp.764~ (2015)[DOI]
18. Shi L, "Estimation of inbreeding and identification of regions under heavy selection based on runs of homozygosity in a Large White pig population", J Anim Sci Biotechnol, 11, pp.46~ (2020)[DOI]
19. China National Commission of Animal Genetic Resources, "Animal genetic resources in China pigs" (2011), China Agricultural Press
20. Ding YY, "Functional and association studies of the cholesteryl ester transfer protein(CETP)gene in a Wannan Black pig model", Anim Genet, 46, pp.702~706 (2015)[DOI]
21. Ding X, "Polymorphisms and sequencing analysis in 5′ upstream and intron 2 region of H-FABP gene in Anhui Wannan Black pig population", J Anim Vet Adv, 10, pp.1568~1572 (2011)
22. Zhang XD, "Relationship between polymorphisms in exon 10 of FSHR gene and litter size in swine", Genet Mol Res, 14, pp.8252~8261 (2015)[DOI]
23. Xiaoling Ding, "Polymorphism, Expression of Natural Resistance-associated Macrophage Protein 1 Encoding Gene (NRAMP1) and Its Association with Immune Traits in Pigs", Animal Bioscience, 27(8), pp.1189~1195 (2014), 아세아·태평양축산학회[DOI]
24. G.Q. Tang, "Inbreeding and Genetic Diversity in Three Imported Swine Breeds in China Using Pedigree Data", Animal Bioscience, 26(6), pp.755~765 (2013), 아세아·태평양축산학회[DOI]
25. Wei Zhang, "Genomic analysis reveals selection signatures of the Wannan Black pig during domestication and breeding", Animal Bioscience, 33(5), pp.712~721 (2020), 아세아·태평양축산학회[DOI]
26. Purcell S, "PLINK : A tool set for whole-genome association and population-based linkage analyses", Am J Hum Genet, 81, pp.559~575 (2007)[DOI]
27. Peripolli E, "Autozygosity islands and ROH patterns in Nellore lineages : evidence of selection for functionally important traits", BMC Genomics, 19, pp.680~ (2018)[DOI]
28. Xu Z, "Assessment of autozygosity derived from runs of homozygosity in Jinhua pigs disclosed by sequencing data", Front Genet, 10, pp.274~ (2019)[DOI]
29. Zhao G, "Genome-wide assessment of runs of homozygosity in Chinese Wagyu beef cattle", Animals, 10, pp.1425~ (2020)[DOI]
30. Mastrangelo S, "Runs of homozygosity reveal genome-wide autozygosity in Italian sheep breeds", Anim Genet, 49, pp.71~81 (2018)[DOI]
31. Huang DW, "Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources", Nat Protoc, 4, pp.44~57 (2009)[DOI]
32. Gibson J, "Extended tracts of homozygosity in outbred human populations", Hum Mol Genet, 15, pp.789~795 (2006)[DOI]
33. Peripolli E, "Runs of homozygosity : current knowledge and applications in livestock", Anim Genet, 48, pp.255~271 (2017)[DOI]
34. He SG, "Genome-wide scan for runs of homozygosity identifies candidate genes related to economically important traits in Chinese merino", Animals, 10, pp.524~ (2020)[DOI]
35. Bosse M, "Regions of homozygosity in the porcine genome : consequence of demography and the recombination landscape", PLoS Genet, 8, pp.e1003100~ (2012)[DOI]
36. Marras G, "Analysis of runs of homozygosity and their relationship with inbreeding in five cattle breeds farmed in Italy", Anim Genet, 46, pp.110~121 (2015)[DOI]
37. Luis Gomez-Raya, "Autozygosity and Genetic Differentiation of Landrace and Large White Pigs as Revealed by the Genetic Analyses of Crossbreds", Frontiers in Genetics, 10 (2019), Frontiers Media SA[DOI]
38. McQuillan R, "Runs of homozygosity in european populations", Am J Hum Genet, 83, pp.658~ (2008)[DOI]
39. Tomasz Szmatoła, "Detection of runs of homozygosity in conserved and commercial pig breeds in Poland", Journal of Animal Breeding and Genetics, 137(6), pp.571~580 (2020), Wiley[DOI]
40. Li Q, "Genetic diversity analysis based on microsatellite markers in 5 Anhui local and 5 introduced pig breeds", Swine Prod, 3, pp.67~72 (2018)
41. Woolliams J, "Utilization and conservation of farm animal genetic resources", pp.147~165 (2007), Wageningen Academic Publishers
42. Abdelmohsen K, "Ubiquitin-mediated proteolysis of HuR by heat shock", EMBO J, 28, pp.1271~1282 (2009)[DOI]
43. Ma X, "Effect of polymorphisms in the CAMKMT gene on growth traits in Ujumqin sheep", Anim Genet, 47, pp.618~622 (2016)[DOI]
44. Qingli Meng, "Identification of growth trait related genes in a Yorkshire purebred pig population by genome-wide association studies", Animal Bioscience, 30(4), pp.462~469 (2017), 아세아·태평양축산학회[DOI]
45. Bao X, "Developmental changes of Col3a1mRNA expression in muscle and their association with intramuscular collagen in pigs", J Genet Genomics, 34, pp.223~228 (2007)[DOI]
46. Maldonado L, "GULP1, a potential tumor suppressor gene in ovarian tumors and its utility as a biomarker", Cancer Res, 70, pp.4891~ (2010)[DOI]
47. Luhrig S, "The novel BTB-kelch protein, KBTBD8, is located in the Golgi apparatus and translocates to the spindle apparatus during mitosis", Cell Div, 8, pp.3~ (2013)[DOI]
48. Avila-Arcos MC, "Population history and gene divergence in native Mexicans inferred from 76 human exomes", Mol Biol Evol, 37, pp.994~1006 (2020)[DOI]

관련 논문AI추천