The role of rumen microbiota in enteric methane mitigation for sustainable ruminant production

키워드

참고문헌 (95)

1. Rosenzweig C, "Climate change responses benefit from a global food system approach", Nat Food, 1, pp.94~97 (2020)[DOI]
2. FAO, "Sustainable healthy diets: guiding principles", FAO, WHO, ~ (2019)
3. Arndt C, "Full adoption of the most effective strategies to mitigate methane emissions by ruminants can help meet the 1. 5 °C target by 2030 but not 2050", Proc Natl Acad Sci USA, 119, pp.e2111294119~ (2022)[DOI]
4. "OECD-FAO Agricultural Outlook 2022-2031" (2022)[URL]
5. Ungerfeld EM, "Metabolic hydrogen flows in rumen fermentation : Principles and possibilities of interventions", Front Microbiol, 11, pp.589~ (2020)[DOI]
6. Johnson KA, "Methane emissions from cattle", J Anim Sci, 73, pp.2483~2492 (1995)[DOI]
7. Wright AD, "Molecular diversity of rumen methanogens from sheep in Western Australia", Appl Environ Microbiol, 70, pp.1263~1270 (2004)[DOI]
8. Shibata M, "Factors affecting methane production and mitigation in ruminants", Anim Sci J, 81, pp.2~10 (2010)[DOI]
9. Greening C, "Diverse hydrogen production and consumption pathways influence methane production in ruminants", ISME J, 13, pp.2617~2632 (2019)[DOI]
10. Tapio I, "The ruminal microbiome associated with methane emissions from ruminant livestock", J Anim Sci Biotechnol, 8, pp.7~ (2017)[DOI]
11. Lyons T, "Variations in methane yield and microbial community profiles in the rumen of dairy cows as they pass through stages of first lactation", J Dairy Sci, 101, pp.5102~5114 (2018)[DOI]
12. Difford GF, "Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows", PLoS Genet, 14, pp.e1007580~ (2018)[DOI]
13. Wallace RJ, "A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions", Sci Adv, 5, pp.eaav8391~ (2019)[DOI]
14. Kittelmann S, "Two different bacterial community types are linked with the low-methane emission trait in sheep", Plos One, 9, pp.e103171~ (2014)[DOI]
15. Danielsson R, "Methane production in dairy cows correlates with rumen methanogenic and bacterial community structure", Front Microbiol, 8, pp.226~ (2017)[DOI]
16. Belanche A, "Effect of progressive inoculation of fauna-free sheep with holotrich protozoa and total-fauna on rumen fermentation, microbial diversity and methane emissions", FEMS Microbiol Ecol, 91, pp.fiu026~ (2015)[DOI]
17. Lima FS, "Prepartum and postpartum rumen fluid microbiomes : characterization and correlation with production traits in dairy cows", Appl Environ Microbiol, 81, pp.1327~1337 (2015)[DOI]
18. Liu C, "Role of age-related shifts in rumen bacteria and methanogens in methane production in cattle", Front Microbiol, 8, pp.1563~ (2017)[DOI]
19. Brask M, "Methane production and diurnal variation measured in dairy cows and predicted from fermentation pattern and nutrient or carbon flow", Animal, 9, pp.1795~1806 (2015)[DOI]
20. Hristov AN, "Symposium review : Uncertainties in enteric methane inventories, measurement techniques, and prediction models", J Dairy Sci, 101, pp.6655~6674 (2018)[DOI]
21. Frey M, "Hydrogenases : hydrogen-activating enzymes", Chem"biochem, 3, pp.153~160 (2002)[DOI]
22. Reichardt N, "Phylogenetic distribution of three pathways for propionate production within the human gut microbiota", ISME J, 8, pp.1323~1335 (2014)[DOI]
23. Williams SRO, "Volatile fatty acids in ruminal fluid can be used to predict methane yield of dairy cows", Animals, 9, pp.1006~ (2019)[DOI]
24. Janssen PH, "Influence of hydrogen on rumen methane formation and fermentation balances through microbial growth kinetics and fermentation thermodynamics", Anim Feed Sci Technol, 160, pp.1~22 (2010)[DOI]
25. -hydrogenase, "J Bacteriol", 2014, 3840~3852, 10.1128[DOI]
26. Shi Y, "Formation of formate and hydrogen, and flux of reducing equivalents and carbon in Ruminococcus flavefaciens FD-1", Antonie Van Leeuwenhoek, 72, pp.101~109 (1997)[DOI]
27. Emerson EL, "Fermentation of model hemicelluloses by Prevotella strains and Butyrivibrio fibrisolvens in pure culture and in ruminal enrichment cultures", Appl Microbiol Biotechnol, 101, pp.4269~4278 (2017)[DOI]
28. Paillard D, "Relation between phylogenetic position, lipid metabolism and butyrate production by different Butyrivibrio-like bacteria from the rumen", Antonie Van Leeuwenhoek, 91, pp.417~422 (2007)[DOI]
29. Cato EP, "Designation of neotype strains for Bacteroides amylophilus Hamlin and Hungate 1956 and Bacteroides succinogenes Hungate 1950", Int J Syst Bacteriol, 28, pp.491~495 (1978)[DOI]
30. Joblin KN, "Degradation of fresh ryegrass by methanogenic co-cultures of ruminal fungi grown in the presence or absence of Fibrobacter succinogenes", Curr Microbiol, 45, pp.46~53 (2002)[DOI]
31. Aschenbach JR, "Gluconeogenesis in dairy cows : the secret of making sweet milk from sour dough", IUBMB Life, 62, pp.869~877 (2010)[DOI]
32. Allen MS, "Board-invited review : the hepatic oxidation theory of the control of feed intake and its application to ruminants", J Anim Sci, 87, pp.3317~3334 (2009)[DOI]
33. Buddle BM, "Strategies to reduce methane emissions from farmed ruminants grazing on pasture", Vet J, 188, pp.11~17 (2011)[DOI]
34. "Reducing methane emissions form livestock. Scientific achievements in agriculture"[URL]
35. Abecia L, "Effect of bromochloromethane on methane emission, rumen fermentation pattern, milk yield, and fatty acid profile in lactating dairy goats", J Dairy Sci, 95, pp.2027~2036 (2012)[DOI]
36. Hristov AN, "An inhibitor persistently decreased enteric methane emission from dairy cows with no negative effect on milk production", Proc Natl Acad Sci USA, 112, pp.10663~10668 (2015)[DOI]
37. Mitsumori M, "Responses in digestion, rumen fermentation and microbial populations to inhibition of methane formation by a halogenated methane analogue", Br J Nutr, 108, pp.482~491 (2012)[DOI]
38. McCrabb GJ, "Inhibiting methane production in Brahman cattle by dietary supplementation with a novel compound and the effects on growth", Aust J Agric Rec, 48, pp.323~329 (1997)[DOI]
39. Denman SE, "Quantitation and diversity analysis of ruminal methanogenic populations in response to the antimethanogenic compound bromochloromethane", FEMS Microbiol Ecol, 62, pp.313~322 (2007)[DOI]
40. Goel G, "Inhibition of methanogens by bromochloromethane : effects on microbial communities and rumen fermentation using batch and continuous fermentations", Br J Nutr, 101, pp.1484~1492 (2009)[DOI]
41. Williams AG, "The effect of cocultivation with hydrogen-consuming bacteria on xylanolysis by Ruminococcus flavefaciens", Curr Microbiol, 29, pp.133~138 (1994)[DOI]
42. Denman SE, "Metagenomic analysis of the rumen microbial community following inhibition of methane formation by a halogenated methane analog", Front Microbiol, 6, pp.1087~ (2015)[DOI]
43. Mackie RI, "Rumen" (2013), John Wiley & Sons Ltd
44. Yarlett N, "Hydrogenosomes in known species of rumen entodiniomorphid protozoa", FEMS Microbiol Lett, 21, pp.15~19 (1984)[DOI]
45. Finlay BJ, "Some rumen ciliates have endosymbiotic methanogens", FEMS Microbiol Lett, 117, pp.157~161 (1994)[DOI]
46. Vogels GD, "Association of methanogenic bacteria with rumen ciliates", Appl Environ Microbiol, 40, pp.608~612 (1980)[DOI]
47. Belanche A, "Study of methanogen communities associated with different rumen protozoal populations", FEMS Microbiol Ecol, 90, pp.663~677 (2014)[DOI]
48. Ng F, "An adhesin from hydrogen-utilizing rumen methanogen Methanobrevibacter ruminantium M1 binds a broad range of hydrogen-producing microorganisms", Environ Microbiol, 18, pp.3010~3021 (2016)[DOI]
49. Morgavi DP, "Changes in methane emission and rumen fermentation parameters induced by refaunation in sheep", Aust J Exp Agric, 48, pp.69~72 (2008)[DOI]
50. Morgavi DP, "Rumen protozoa and methanogenesis : not a simple cause-effect relationship", Br J Nutr, 107, pp.388~397 (2012)[DOI]
51. Newbold CJ, "The importance of methanogens associated with ciliate protozoa in ruminal methane production in vitro", Lett Appl Microbiol, 21, pp.230~234 (1995)[DOI]
52. Guyader J, "Influence of rumen protozoa on methane emission in ruminants : a meta-analysis approach", Animal, 8, pp.1816~1825 (2014)[DOI]
53. Farra PA, "Manipulation of the ruminal fermentation. III. effect of nitrate on ruminal volatile fatty acid production and milk composition", J Dairy Sci, 54, pp.1018~1024 (1971)[DOI]
54. Glasson CRK, "Benefits and risks of including the bromoform containing seaweed Asparagopsis in feed for the reduction of methane production from ruminants", Algal Res, 64, pp.102673~ (2022)[DOI]
55. Shinkai T, "Mitigation of methane production from cattle by feeding cashew nut shell liquid", J Dairy Sci, 95, pp.5308~5316 (2012)[DOI]
56. Weimar MR, "Development of multiwellplate methods using pure cultures of methanogens to identify new inhibitors for suppressing ruminant methane emissions", Appl Environ Microbiol, 83, pp.e00396-17~ (2017)[DOI]
57. Bocquier F, "Sustainability of ruminant agriculture in the new context : feeding strategies and features of animal adaptability into the necessary holistic approach", Animal, 4, pp.1258~1273 (2010)[DOI]
58. Wasson DE, "Enteric methane mitigation through Asparagopsis taxiformis supplementation and potential algal alternatives", Front Anim Sci, 3, pp.999338~ (2022)[DOI]
59. Creevey CJ, "Determining the culturability of the rumen bacterial microbiome", Microb Biotechnol, 7, pp.467~479 (2014)[DOI]
60. Henderson G, "Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range", Sci Rep, 5, pp.14567~ (2015)[DOI]
61. From feed to milk: Understanding rumen function, "Ishler V", Pennsylvania State University, ~, pp.Extension Circular 422 (1996)
62. Wallace RJ, "The rumen microbial metagenome associated with high methane production in cattle", BMC Genomics, 16, pp.839~ (2015)[DOI]
63. Pope PB, "Isolation of Succinivibrionaceae implicated in low methane emissions from Tammar wallabies", Science, 333, pp.646~648 (2011)[DOI]
64. McCabe MS, "Illumina MiSeq phylogenetic amplicon sequencing shows a large reduction of an uncharacterised Succinivibrionaceae and an increase of the Methanobrevibacter gottschalkii clade in feed restricted cattle", PLoS One, 10, pp.e0133234~ (2015)[DOI]
65. Shabat SKB, "Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants", ISME J, 10, pp.2958~2972 (2016)[DOI]
66. Lana RP, "The role of pH in regulating ruminal methane and ammonia production", J Anim Sci, 76, pp.2190~2196 (1998)[DOI]
67. Henning PH, "The potential of Megasphaera elsdenii isolates to control ruminal acidosis", Anim Feed Sci Technol, 157, pp.13~19 (2010)[DOI]
68. Kamke J, "Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation", Microbiome, 4, pp.56~ (2016)[DOI]
69. Malmuthuge N, "Understanding host-microbial interactions in rumen : searching the best opportunity for microbiota manipulation", J Anim Sci Biotechnol, 8, pp.8~ (2017)[DOI]
70. Stewart CS, "The rumen microbial ecosystem", pp.10~72 (1997), Chapman & Hall
71. Gross R, "The hydE gene is essential for the formation of Wolinella succinogenes NiFe-hydrogenase", FEMS Microbiol Lett, 227, pp.197~202 (2003)[DOI]
72. Henderson C, "The influence of extracellular hydrogen on the metabolism of Bacteroides ruminicola, Anaerovibrio lipolytica and Selenomonas ruminantium", J Gen Microbiol, 119, pp.485~491 (1980)[DOI]
73. Beauchemin KA, "Methane emissions from beef cattle : Effects of fumaric acid, essential oil, and canola oil", J Anim Sci, 84, pp.1489~1496 (2006)[DOI]
74. Wood TA, "Encapsulated fumaric acid as a feed ingredient to decrease ruminal methane emissions", Anim Feed Sci Technol, 152, pp.62~71 (2009)[DOI]
75. Foley PA, "Effect of DL-malic acid supplementation on feed intake, methane emission, and rumen fermentation in beef cattle", J Anim Sci, 87, pp.1048~1057 (2009)[DOI]
76. Asanuma N, "Effect of the addition of fumarate on methane production by ruminal microorganisms in vitro", J Dairy Sci, 82, pp.780~787 (1999)[DOI]
77. Louis P, "Microbial lactate utilisation and the stability of the gut microbiome", Gut Microbiome, 3, pp.e3~ (2022)[DOI]
78. Hino T, "Presence of lactate dehydrogenase and lactate racemase in Megasphaera elsdenii grown on glucose or lactate", Appl Envion Microbiol, 59, pp.255~259 (1993)[DOI]
79. Prabhu R, "Lactate and acrylate metabolism by Megasphaera elsdenii under batch and steadystate conditions", Appl Environ Microbiol, 78, pp.8564~8570 (2012)[DOI]
80. Asanuma N, "Prevention of rumen acidosis and suppression of ruminal methanogenesis by augmentation of lactate utilization", Anim Sci J(Japan), 75, pp.543~550 (2004)
81. Mizrahi I, "The compositional variation of the rumen microbiome and its effect on host performance and methane emission", Animal, 12, pp.s220~s232 (2018)[DOI]
82. Accetto T, "The diverse and extensive plant polysaccharide degradative apparatuses of the rumen and hindgut Prevotella species : A factor in their ubiquity?", Syst Appl Microbiol, 42, pp.107~116 (2019)[DOI]
83. Shinkai T, "Prevotella lacticifex sp. nov., isolated from the rumen of cows", Int J Syst Evol Microbiol, 72, pp.005278~ (2022)[DOI]
84. Ramšak, "Unravelling the genetic diversity of ruminal bacteria belonging to the CFB phylum", FEMS Microbiol Ecol, 33, pp.69~79 (2000)[DOI]
85. Purushe J, "Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii : insights into their environmental niche", Microb Ecol, 60, pp.721~729 (2010)[DOI]
86. Bekele AZ, "Genetic diversity and diet specificity of ruminal Prevotella revealed by 16S rRNA genebased analysis", FEMS Microbiol Lett, 305, pp.49~57 (2010)[DOI]
87. Stevenson DM, "Dominance of Prevotella and low abundance of classical ruminal bacterial species in the bovine rumen revealed by relative quantification real-time PCR", Appl Microbiol Biotechnol, 75, pp.165~174 (2007)[DOI]
88. Carberry CA, "Effect of phenotypic residual feed intake and dietary forage content on the rumen microbial community of beef cattle", Appl Environ Microbiol, 78, pp.4949~4958 (2012)[DOI]
89. Myer PR, "Rumen microbiome from steers differing in feed efficiency", PLoS One, 10, pp.e0129174~ (2015)[DOI]
90. Betancur-Murillo CL, "Prevotella : A key player in ruminal metabolism", Microorganisms, 11, pp.1~ (2022)[DOI]
91. Hitch TCA, "A taxonomic note on the genus Prevotella : Description of four novel genera and emended description of the genera Hallella and Xylanibacter", Syst Appl Microbiol, 45, pp.126354~ (2022)[DOI]
92. Kogawa M, "Obtaining high-quality draft genomes from uncultured microbes by cleaning and co-assembly of single-cell amplified genomes", Sci Rep, 8, pp.2059~ (2018)[DOI]
93. Chijiiwa R, "Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota", Microbiome, 8, pp.5~ (2020)[DOI]
94. Gawad C, "Single-cell genome sequencing : current state of the science", Nat Rev Genet, 17, pp.175~188 (2016)[DOI]
95. Cuomo ASE, "Single-cell genomics meets human genetics", Nat Rev Genet, 24, pp.535~549 (2023)[DOI]

관련 논문AI추천