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Complete genome sequence of Lactobacillus plantarum SK156, a candidate vehicle for mucosal vaccine delivery

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주제분류축산학

초록

Lactobacillus plantarum SK156 was isolated from traditional Korean food. The genome of SK156 strain consists of a circular chromosome (3,231,383 bp) with guanine (G) + cytosine (C) content of 44.56%. Among the predicted 2,991 protein-coding genes, the genome included genes encoding for α-amylase, which hydrolyzes α-bonds of polysaccharides. Genomic sequencing of L. plantarum SK156 will give information on the mechanism involved in the enzymatic degradation of polysaccharides and its application for improving feed efficiency.

Abstract

Lactobacillus plantarum SK156 was isolated from traditional Korean food. The genome of SK156 strain consists of a circular chromosome (3,231,383 bp) with guanine (G) + cytosine (C) content of 44.56%. Among the predicted 2,991 protein-coding genes, the genome included genes encoding for α-amylase, which hydrolyzes α-bonds of polysaccharides. Genomic sequencing of L. plantarum SK156 will give information on the mechanism involved in the enzymatic degradation of polysaccharides and its application for improving feed efficiency.

참고문헌 (6)

  1. 채종표, "Construction of a Bile-responsive Expression System in Lactobacillus plantarum", 한국축산식품학회지, 39(1), pp.13~22 (2019), 한국축산식품학회[DOI]
  2. Valerie Diane V. Valeriano, "Comparative genomic analysis of Lactobacillus mucosae LM1 identifies potential niche-specific genes and pathways for gastrointestinal adaptation", Genomics, 111(1), pp.24~33 (2019), Elsevier BV[DOI]
  3. Chen-Shan Chin, "Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data", Nature Methods, 10(6), pp.563~569 (2013), Springer Science and Business Media LLC[DOI]
  4. Sundarram A, "α-Amylase production and applications : a review", J Appl Environ Microbiol, 2, pp.166~175 (2014)[DOI]
  5. Qiaoge Zhang, "Microbial α-amylase: A biomolecular overview", Process Biochemistry, 53, pp.88~101 (2017), Elsevier BV[DOI]
  6. V. Y. Novakovska, "Productivity of pigs when feeding celluloseamylolytic additive", Scientific Messenger of LNU of Veterinary Medicine and Biotechnologies, 22(92), pp.76~80 (2020), Stepan Gzhytskyi National University of Veterinary Medicine and Biotechnologies Lviv[DOI]

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