Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
2
조회
0
다운로드
0
인용
0
참고문헌
키워드
초록
Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular chromosome (3.1 Mb) with guanine (G) + cytosine (C) content of 47.1%. Annotation revealed 3,181 protein-coding sequences (CDSs), 30 rRNAs, and 83 tRNAs. Gene associated 11% of the genes were involved in replication, recombination, and repair. We also annotated various stress-related, acid resistance, bile salt resistance and adhesion-related domains in this strain, which likely provide support in exerting probiotic action by survival under gastrointestinal tract. These results add to our comprehensive understanding of B. coagulans and suggest potential mammal-related industrial applications.
Abstract
Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular chromosome (3.1 Mb) with guanine (G) + cytosine (C) content of 47.1%. Annotation revealed 3,181 protein-coding sequences (CDSs), 30 rRNAs, and 83 tRNAs. Gene associated 11% of the genes were involved in replication, recombination, and repair. We also annotated various stress-related, acid resistance, bile salt resistance and adhesion-related domains in this strain, which likely provide support in exerting probiotic action by survival under gastrointestinal tract. These results add to our comprehensive understanding of B. coagulans and suggest potential mammal-related industrial applications.
참고문헌 (9)
- Fei Su, "Genomic analysis of thermophilic Bacillus coagulans strains: efficient producers for platform bio-chemicals", Scientific Reports, 4(1), pp.3926~ (2015), Springer Science and Business Media LLC[DOI]
- Yuanhao Zhou, "Application of Bacillus coagulans in Animal Husbandry and Its Underlying Mechanisms", Animals, 10(3), pp.454~ (2020), MDPI AG[DOI]
- Gözde Konuray, "Potential Use of Bacillus coagulans in the Food Industry", Foods, 7(6), pp.92~ (2018), MDPI AG[DOI]
- Hyun-Jun Jang, "Characterization and functional test of canine probiotics", Frontiers in Microbiology, 12, pp.625562~ (2021), Frontiers Media SA[DOI]
- Ju-Eun Lee, "Complete genome sequence of Streptococcus hyointestinalis B19, a strain producing bacteriocin, isolated from chicken feces", 한국축산학회지, 62(3), pp.420~422 (2020), 한국축산학회[DOI]
- Ramy K Aziz, "The RAST Server: Rapid Annotations using Subsystems Technology", BMC Genomics, 9(1), pp.75~ (2008), Springer Science and Business Media LLC[DOI]
- A Palop, "Occurrence of a Highly Heat-Sensitive Spore Subpopulation of Bacillus coagulans STCC 4522 and Its Conversion to a More Heat-Stable Form", Applied and Environmental Microbiology, 63(6), pp.2246~2251 (1997), American Society for Microbiology[DOI]
- Jean Guzzo, "Biotechnical applications of small heat shock proteins from bacteria", The International Journal of Biochemistry & Cell Biology, 44(10), pp.1698~1705 (2012), Elsevier BV[DOI]
- Pan Li, "Genomic characterization and probiotic potency of Bacillus sp. DU-106, a highly effective producer of L-lactic acid isolated from fermented yogurt", Frontiers in Microbiology, 9, pp.2216~ (2018), Frontiers Media SA[DOI]
