본문 바로가기
KERD
논문KCI 등재

Gut Microbiota Community and Its Assembly Associated with Age and Diet in Chinese Centenarians

2

조회

0

다운로드

4

인용

0

참고문헌

키워드

주제분류생물학

초록

Increasing evidence suggests that gut microbiota underpin the development of health and longevity. However, our understanding of what influences the composition of this community of the longevous has not been adequately described. Therefore, illumina sequencing analysis was performed on the gut microbiota of centenarians (aged 100-108 years; RC) and younger elderlies (aged 85-99 years; RE) living in Bama County, Guangxi, China and the elderlies (aged 80-92 years; CE) living in Nanning City, Guangxi, China. In addition, their diet was monitored using a semiquantitative dietary questionary (FFQ 23). The results revealed the abundance of Roseburia and Escherichia was significantly greater, whereas that of Lactobacillus, Faecalibacterium, Parabacteroides, Butyricimonas, Coprococcus, Megamonas, Mitsuokella, Sutterella, and Akkermansia was significantly less in centenarians at the genus level. Both clustering analysis and UniFraq distance analysis showed structural segregation with age and diet among the three populations. Using partial least square discriminate analysis and redundancy analysis, we identified 33 and 34 operational taxonomic units (OTUs) as key OTUs that were significantly associated with age and diet, respectively. Age-related OTUs were characterized as Ruminococcaceae, Clostridiaceae, and Lachnospiraceae, and the former two were increased in the centenarians; diet-related OTUs were classified as Bacteroidales, Lachnospiraceae, and Ruminococcaceae. The former two were deceased, whereas the later one was increased, in the high-fiber diet. The age and high-fiber diet were concomitant with changes in the gut microbiota of centenarians, suggesting that age and high-fiber diet can establish a new structurally balanced architecture of gut microbiota that may benefit the health of centenarians.

Abstract

Increasing evidence suggests that gut microbiota underpin the development of health and longevity. However, our understanding of what influences the composition of this community of the longevous has not been adequately described. Therefore, illumina sequencing analysis was performed on the gut microbiota of centenarians (aged 100-108 years; RC) and younger elderlies (aged 85-99 years; RE) living in Bama County, Guangxi, China and the elderlies (aged 80-92 years; CE) living in Nanning City, Guangxi, China. In addition, their diet was monitored using a semiquantitative dietary questionary (FFQ 23). The results revealed the abundance of Roseburia and Escherichia was significantly greater, whereas that of Lactobacillus, Faecalibacterium, Parabacteroides, Butyricimonas, Coprococcus, Megamonas, Mitsuokella, Sutterella, and Akkermansia was significantly less in centenarians at the genus level. Both clustering analysis and UniFraq distance analysis showed structural segregation with age and diet among the three populations. Using partial least square discriminate analysis and redundancy analysis, we identified 33 and 34 operational taxonomic units (OTUs) as key OTUs that were significantly associated with age and diet, respectively. Age-related OTUs were characterized as Ruminococcaceae, Clostridiaceae, and Lachnospiraceae, and the former two were increased in the centenarians; diet-related OTUs were classified as Bacteroidales, Lachnospiraceae, and Ruminococcaceae. The former two were deceased, whereas the later one was increased, in the high-fiber diet. The age and high-fiber diet were concomitant with changes in the gut microbiota of centenarians, suggesting that age and high-fiber diet can establish a new structurally balanced architecture of gut microbiota that may benefit the health of centenarians.

참고문헌 (42)

  1. Anonymous, "Use of geographic information systems in epidemiology (GIS-Epi)", Epidemiol. Bull, 17, pp.1~6 (1996)
  2. Backhed F, "Host-bacterial mutualism in the human intestine", Science, 307, pp.1915~1920 (2005)
  3. Biagi E, "Ageing of the human metaorganism: the microbial counterpart", Age, 34, pp.247~267 (2012)
  4. Biagi E, "Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians", PLoS One, 5, pp.1~14 (2010)
  5. Caporaso J G, "QIIME allows analysis of high-throughput community sequencing data", Nat. Methods, 7, pp.335~336 (2010)
  6. Caporaso JG, "Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample", Proc. Natl. Acad. Sci. USA, 108, pp.4516~4522 (2011)
  7. Chen Y, "Characterization of fecal microbial communities in patients with liver cirrhosis", Hepatology, 54, pp.562~572 (2011)
  8. Claesson MJ, "Composition, variability, and temporal stability of the intestinal microbiota of the elderly", Proc. Natl. Acad. Sci. USA, 108, pp.4586~4591 (2011)
  9. Collado MC, "Intestinal integrity and Akkermansia muciniphila, a mucin-degrading member of the intestinal microbiota present in infants, adults, and the elderly", Appl. Environ. Microbiol, 73, pp.7767~7770 (2007)
  10. Davinelli S, "Extending healthy ageing: nutrient sensitive pathway and centenarian population", Immun. Ageing, 9, pp.1~7 (2012)
  11. De Filippo C, "Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa", Proc. Natl. Acad. Sci. USA, 107, pp.14691~14696 (2010)
  12. Dethlefsen L, "The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing", PLoS Biol, 6, pp.2383~2400 (2008)
  13. Devillard E, "Metabolism of linoleic acid by human gut bacteria: different routes for biosynthesis of conjugated linoleic acid", J. Bacteriol, 189, pp.2566~2570 (2007)
  14. Drago L, "Cultivable and pyrosequenced fecal microflora in centenarians and young subjects", J. Clin. Gastroenterol, 46, pp.S81~S84 (2012)
  15. Duncan SH, "Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces", Appl. Environ. Microbiol, 73, pp.1073~1078 (2007)
  16. Duncan SH, "Cultivable bacterial diversity from the human colon", Lett. Appl. Microbiol, 44, pp.343~350 (2007)
  17. Edgar RC, "UPARSE: highly accurate OTU sequences from microbial amplicon reads", Nat. Methods, 10, pp.996~998 (2013)
  18. Wenguang Fan, "Impact of Diet in Shaping Gut Microbiota Revealed by a Comparative Study in Infants During the First Six Months of Life", Journal of Microbiology and Biotechnology, 24(2), pp.133~143 (2014), 한국미생물·생명공학회[DOI]
  19. 구혜진, "Development of a Novel Long-Range 16S rRNA Universal Primer Set for Metagenomic Analysis of Gastrointestinal Microbiota in Newborn Infants", Journal of Microbiology and Biotechnology, 24(6), pp.812~822 (2014), 한국미생물·생명공학회[DOI]
  20. Ley RE, "Evolution of mammals and their gut microbes", Science, 320, pp.1647~1651 (2008)
  21. Ling ZX, "Altered fecal microbiota composition associated with food allergy in infants", Appl. Environ. Microbiol, 80, pp.2546~2554 (2014)
  22. Louis P, "Restricted distribution of the butyrate kinase pathway among butyrate-producing bacteria from the human colon", J. Bacteriol, 186, pp.2099~2106 (2004)
  23. Macfarlane GT, "Starch utilization by the human large intestinal microflora", J. Appl. Bacteriol, 60, pp.195~201 (1986)
  24. Macfarlane S, "Microbial colonization of the upper gastrointestinal tract in patients with Barrett's esophagus", Clin. Infect. Dis, 45, pp.29~38 (2007)
  25. Magoc T, "FLASH: fast length adjustment of short reads to improve genome assemblies", Bioinformatics, 27, pp.2957~2963 (2011)
  26. Mueller S, "Differences in fecal microbiota in different European study populations in relation to age, gender, and country: a cross-sectional study", Appl. Environ. Microbiol, 72, pp.1027~1033 (2006)
  27. Palmer C, "Development of the human infant intestinal microbiota", PloS Biol, 5, pp.1556~1573 (2007)
  28. Pryde SE, "The microbiology of butyrate formation in the human colon", FEMS Microbiol. Lett, 217, pp.133~139 (2002)
  29. Rajilic-Stojanovic M, "Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults", Environ. Microbiol, 11, pp.1736~1751 (2009)
  30. Supatjaree Ruengsomwong, "Senior Thai Fecal Microbiota Comparison Between Vegetarians and Non-Vegetarians Using PCR-DGGE and Real-Time PCR", Journal of Microbiology and Biotechnology, 24(8), pp.1026~1033 (2014), 한국미생물·생명공학회[DOI]
  31. Salonen A, "Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men", ISME J, 8, pp.2218~2230 (2014)
  32. Salyers AA, "Bacteroides of the human lower intestinal tract", Annu. Rev. Microbiol, 38, pp.293~313 (1984)
  33. Scott K P, "The influence of diet on the gut microbiota", Pharmacol. Res, 69, pp.52~60 (2013)
  34. Shi S, "Guangxi Zhuang Autonomous County’s 2010 Population Census", pp.222~240 (2012), China Statistics Press
  35. Turnbaugh PJ, "A core gut microbiome in obese and lean twins", Nature, 457, pp.480~487 (2009)
  36. van Hylckama Vlieg JE, "Impact of microbial transformation of food on health-from fermented foods to fermentation in the gastrointestinal tract", Curr. Opin. Biotechnol, 22, pp.211~219 (2011)
  37. Wang Q, "Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy", Appl. Environ. Microbiol, 73, pp.5261~5267 (2007)
  38. Wang T, "Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteer", ISME J, 6, pp.320~329 (2012)
  39. Wong JMW, "Colonic health: fermentation and short chain fatty acids", J. Clin. Gastroenterol, 40, pp.235~243 (2006)
  40. Liang Zhao, "Correlations of Fecal Bacterial Communities with Age and Living Region for the Elderly Living in Bama, Guangxi, China", The Journal of Microbiology, 49(2), pp.186~192 (2011), 한국미생물학회
  41. Zhao L, "Effects of age and region on fecal microflora in elderly subjects living in Bama, Guangxi, China", Curr. Microbiol, 62, pp.64~70 (2011)
  42. Zwielehner J, "Combined PCR-DGGE fingerprinting and quantitative-PCR indicates shifts in fecal population sizes and diversity of Bacteroides, bifidobacteria and Clostridium cluster IV in institutionalized elderly", Exp. Gerontol, 44, pp.440~446 (2009)

관련 논문AI추천

Aging and the microbiome: implications for health and diseaseHye-Yeon Lee, Kyung-Jin Min, WenTing Gao생화학분자생물학회 · BMB Reports2026 · 제59권 제1호Personalized Diets based on the Gut Microbiome as a Target for Health Maintenance: from Current Evidence to Future PossibilitiesShin Ji-Hee, Song Eun-Ji한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2022 · 제32권 제12호Dietary Factors: Major Regulators of the Gut’s MicrobiotaAlexander R. Moschen, Herbert Tilg, Verena Wieser거트앤리버 소화기연관학회협의회 · Gut and Liver2012 · 제6권 제4호Microbial Community of Healthy Thai Vegetarians and Non-Vegetarians, Their Core Gut Microbiota, and Pathogen RiskBhusita Wannissorn, Jiahui Jiang, Jiro Nakayama, Orawan La-ongkham, SUNEE NITISINPRASERT, Supatjaree Ruengsomwong한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2016 · 제26권 제10호Senior Thai Fecal Microbiota Comparison Between Vegetarians and Non-Vegetarians Using PCR-DGGE and Real-Time PCRBhusita Wannissorn, Jiro Nakayama, Naoshige Sakamoto, SUNEE NITISINPRASERT, Supatjaree Ruengsomwong, Yuki Korenori한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2014 · 제24권 제8호Gut microbiota-generated metabolites: missing puzzles to hosts’ health, diseases, and aging유동렬, 하기태, Hang Zhang, Hyun Joo Lee, Jongkil Joo, Jong-Sun Kang, Shibo Wei, Yan Zhang, Yunju Jo생화학분자생물학회 · BMB Reports2024 · 제57권 제5호

이 간행물의 다른 논문 (15건)