Morphology and Mitochondrial Genome of Fischoederius sp. 1 in Thailand
2
조회
0
다운로드
0
인용
0
참고문헌
키워드
초록
A rumen fluke Fischoederius elongatus is assigned to the type species of genus Fischoederius, family Gastrothylacidae. However, the mitochondrial sequences recently published are thought to be of inconsistent species, suggesting that several morphologically similar but genetically distinct species might be classified as Fischoederius elongatus. Thus, mentions of F. elongatus from South, Southeast, and East Asia might unintentionally refer to different species. The present work describes morphology and a full mitochondrial genome sequence of one of these species. The fluke specimens were collected from 2 infected cattle in Thailand. An interesting finding was the presence of a second tRNA-Asp gene next to a partial ND1 gene. It is suggested that these duplicated sequences are the remnants of non-reciprocal recombination events caused by inverted repeats located between ND2 and ND1 mitochondrial genes.
Abstract
A rumen fluke Fischoederius elongatus is assigned to the type species of genus Fischoederius, family Gastrothylacidae. However, the mitochondrial sequences recently published are thought to be of inconsistent species, suggesting that several morphologically similar but genetically distinct species might be classified as Fischoederius elongatus. Thus, mentions of F. elongatus from South, Southeast, and East Asia might unintentionally refer to different species. The present work describes morphology and a full mitochondrial genome sequence of one of these species. The fluke specimens were collected from 2 infected cattle in Thailand. An interesting finding was the presence of a second tRNA-Asp gene next to a partial ND1 gene. It is suggested that these duplicated sequences are the remnants of non-reciprocal recombination events caused by inverted repeats located between ND2 and ND1 mitochondrial genes.
참고문헌 (21)
- Sey O, "Amphistomes (Trematoda, Amphistomida)of cattle and buffalo in Thailand", Miscnea zool hung, 9, pp.11~17 (1994)
- Pfukenyi DM, "Amphistome infections in domestic and wild ruminants in East and Southern Africa: A review", Onderstepoort J Vet Res, 85, pp.1~13 (2018)[DOI]
- 채종일, "Foodborne Intestinal Flukes in Southeast Asia", The Korean Journal of Parasitology, 47(suppl), pp.69~102 (2009), 대한기생충학ㆍ열대의학회
- Sey O, "CRC Handbook of the Zoology of Amphistomes", pp.301~307 (1991), CRC Press
- Jones A, "Keys to the Trematoda: Volume 2" (2005), CABI
- Poirier, "Descriptions d’helminthes nouveaux du Palonia frontalis", Bull Soc philom Paris, 7, pp.73~80 (1883)
- Stiles CW, "A study of the anatomy of Watsonius (n. g.) watsoni of man and of nineteen allied species of mammalian trematode worms of the superfamily Paramphistomoidea", Bull Hyg Lab Publ Health Mar Hosp Service US, 60, pp.1~259 (1910)[DOI]
- Maplestone PA, "A revision of the Amphistomata of mammals", Ann Trop Med Parasitol, 17, pp.113~213 (1923)[DOI]
- Ghatani S, "Molecular characterization of pouched amphistome parasites (Trematoda:Gastrothylacidae) using ribosomal ITS2 sequence and secondary structures", J Helminthol, 86, pp.117~124 (2012)[DOI]
- Ghatani S, "Multilocus sequence evaluation for differentiating species of the trematode Family Gastrothylacidae, with a note on the utility of mitochondrial COI motifs in species identification", Gene, 548, pp.277~284 (2014)[DOI]
- Yang X, "Analysis of the complete Fischoederius elongatus (Paramphistomidae, Trematoda) mitochondrial genome", Parasit Vectors, 8, pp.279~ (2015)[DOI]
- Nak-On S, "Rumen fluke, Fischoederius elongatus (Trematoda: Gastrothylacidae): Preliminary investigation of suitable conditions for egg hatching", Vet Parasitol, 282, pp.109135~ (2020)[DOI]
- Chang Z, "Bridger: a new framework for de novo transcriptome assembly using RNA-seq data", Genome Biol, 16, pp.30~ (2015)[DOI]
- Adisakwattana P, "Comparative molecular analysis of two asparaginyl endopeptidases and encoding genes from Fasciola gigantica", Mol Biochem Parasitol, 156, pp.102~116 (2007)[DOI]
- Bernt M, "MITOS: improved de novo metazoan mitochondrial genome annotation", Mol Phylogenet Evol, 69, pp.313~319 (2013)[DOI]
- Rice P, "EMBOSS: the European Molecular Biology Open Software Suite", Trends Genet, 16, pp.276~277 (2000)[DOI]
- Sievers F, "Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega", Mol Syst Biol, 7, pp.539~ (2011)[DOI]
- Capella-Gutiérrez S, "trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses", Bioinformatics, 25, pp.1972~1973 (2009)[DOI]
- Ronquist F, "MrBayes 3: Bayesian phylogenetic inference under mixed models", Bioinformatics, 19, pp.1572~1574 (2003)[DOI]
- Tandon RS, "Studies on “crowding effect” on Gastrothylax crumenifer and Fischoederius elongatus, the common amphistome parasites of ruminants, observed under natural conditions", Res Bull Meguro Parasit Mus, 7, pp.12~14 (1973)
- Lin CT, "Inverted repeats as genetic elements for promoting DNA inverted duplication: implications in gene amplification", Nucleic Acids Res, 29, pp.3529~3538 (2001)[DOI]
