본문 바로가기
KERD
논문KCI 등재

Complete Genome Sequence of Pseudarthrobacter sp. IC2-21, a Fluquinconazole-Degrading Soil Bacterium

0

조회

0

다운로드

0

인용

0

참고문헌

키워드

주제분류생물학

초록

Pseudarthrobacter sp. IC2-21 is isolated from the greenhouse soil in Icheon, Gyeonggi, Korea. This strain IC2-21 is a first fluquinconazole degrading soil bacterium. We analyze the whole genome sequence of Pseudarthrobacter sp. IC2-21. The sequence analysis revealed that Pseudarthrobacter sp. IC2-21 possesses a single 4,265,009 bps circular chromosome with a DNA G+C-content of 65.4%. This chromosome contains 3,942 protein-coding sequences and 12 rRNA and 51 tRNA genes. In the result of sequence analysis, it is revealed that strain IC2-21 possessed genes coding the triazole pesticides degradation related enzymes, such as oxygenase, and fluquinconazole degradation related genes.

Abstract

Pseudarthrobacter sp. IC2-21 is isolated from the greenhouse soil in Icheon, Gyeonggi, Korea. This strain IC2-21 is a first fluquinconazole degrading soil bacterium. We analyze the whole genome sequence of Pseudarthrobacter sp. IC2-21. The sequence analysis revealed that Pseudarthrobacter sp. IC2-21 possesses a single 4,265,009 bps circular chromosome with a DNA G+C-content of 65.4%. This chromosome contains 3,942 protein-coding sequences and 12 rRNA and 51 tRNA genes. In the result of sequence analysis, it is revealed that strain IC2-21 possessed genes coding the triazole pesticides degradation related enzymes, such as oxygenase, and fluquinconazole degradation related genes.

참고문헌 (10)

  1. Jørgensen LN, "Azole use in agriculture, horticulture, and wood preservation – Is it indispensable?", Front. Cell. Infect. Microbial, 11, pp.730297~ (2021)
  2. Mavroeidi VI, "Sensitivity distributions and crossresistance patterns of Mycosphaerella graminicola to fluquinconazole, prochloraz and azoxystrobin over a period of 9 years", Crop Prot, 24, pp.259~266 (2005)
  3. Vera Palma CA, "Integration between Pseudomonas protegens strains and fluquinconazole for the control of takeall in wheat", Crop Prot, 121, pp.163~172 (2019)
  4. Roman DL, "Effects of triazole fungicides on soil microbiota and on the activities of enzymes found in soil : A review", Agriculture, 11, pp.893~ (2021)
  5. Baćmaga M, "The effect of the Falcon 460 EC fungicide on soil microbial communities, enzyme activities and plant growth", Ecotoxicology, 25, pp.1575~1587 (2016)
  6. Lopes PRM, "Microbial bioremediation of pesticides in agricultural soils : an integrative review on natural attenuation, bioaugmentation and biostimulation", Rev. Environ. Sci. Biotechnol, 21, pp.851~876 (2022)
  7. Tatusova T, "NCBI prokaryotic genome annotation pipeline", Nucleic Acids Res, 44, pp.6614~6624 (2016)
  8. Lee I, "OrthoANI : An improved algorithm and software for calculating average nucleotide identity", Int. J. Syst. Evol. Microbiol, 66, pp.1100~1103 (2016)
  9. Sim HW, "Erratum to : Purification and characterization of protocatechuate 3, 4-dioxygenase from Pseudomonas pseudoalcaligenes KF707", J. Korean Soc. Appl. Biol. Chem, 56, pp.637~ (2013)
  10. Yesankar PJ, "Catalytic resilience of multicomponent aromatic ring-hydroxylating dioxygenases in Pseudomonas for degradation of polycyclic aromatic hydrocarbons", World J. Microbiol. Biotechnol, 39, pp.166~ (2023)

관련 논문AI추천

Complete Genome Sequence of Procymidone-Degrading Prescottella equi YW-05, Isolated from SoilAhn Jae-Hyung, An Sihyun, Choi Han Suk, Chung Joon-hui, Kim Dayeon, Kim Seunghwan, Ko Young-Joon, Weon Hang-Yeon, Yeon Jehyeong한국미생물·생명공학회 · 한국미생물·생명공학회지2025 · 제53권 제1호Complete Genome Sequence of Arthrobacter sp. KNU40, Isolated from Nitrogen-Deficient Corn-Cultivated SoilHwang HeeJoo, Jeong Minsoo, Shin Jae-Ho한국미생물·생명공학회 · 한국미생물·생명공학회지2025 · 제53권 제4호Draft Genome Sequence of Arthrobacter sp. KNU-44 Isolated from Long-Term Maize Rotation Soil in KoreaJeong Minsoo, Kwon Sook-Min, Shin Jae-Ho한국미생물·생명공학회 · 한국미생물·생명공학회지2026 · 제54권 Complete Genome Sequence of Multidrug-Resistant Pseudomonas asiatica CJ23, Isolated from the Agricultural Environment, South KoreaCha Chang-Jun, Kim Yong-Seok한국미생물·생명공학회 · 한국미생물·생명공학회지2024 · 제52권 제4호Complete Genome Sequence of the Poly(Butylene Adipate- co -Terephthalate) (PBAT)-Degrading Piscinibacter sp. SBD11-9, Isolated from an Agricultural Soil with Long-Term Use of Biodegradable Mulch FilmsAhn Jae-Hyung, An Sihyun, Chung Joon-hui, Jeon Yuna, Kim Dayeon, Ko Young-Joon, Sang Byoung-In, Weon Hang-Yeon, Yeon Jehyeong, Yoon Gyeong Seok한국미생물·생명공학회 · 한국미생물·생명공학회지2025 · 제53권 제4호Complete Genome Sequence of Bacillus pumilus CIMT1, Isolated from the Rhizosphere of Soybean ( Glycine max L.)Bashizi Tino, Jung Da-Ryung, Shin Jae-Ho한국미생물·생명공학회 · 한국미생물·생명공학회지2024 · 제52권 제4호

이 간행물의 다른 논문 (13건)