Effects of Antibiotic Growth Promoter and Characterization of Ecological Succession in Swine Gut Microbiota
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Ever since the ban on antibiotic growth promoters (AGPs), the livestock death rate has increased owing to pathogenic bacterial infections. There is a need of developing AGP alternatives; however, the mechanisms by which AGP enhances livestock growth performance are not clearly understood. In this study, we fed 3-week-old swine for 9 weeks with and without AGPs containing chlortetracycline, sulfathiazole, and penicillin to investigate the effects of AGPs on swine gut microbiota. Microbial community analysis was done based on bacterial 16S rRNA genes using MiSeq. The use of AGP showed no growth promoting effect, but inhibited the growth of potential pathogens during the early growth stage. Our results showed the significant increase in species richness after the stabilization of gut microbiota during the post-weaning period (4-week-old). Moreover, the swine gut microbiota was divided into four clusters based on the distribution of operational taxonomic units, which was significantly correlated to the swine weight regardless of AGP treatments. Taxonomic abundance analysis indicated a negative correlation between host weight and the abundance of the family Prevotellaceae species, but showed positive correlation to the abundance of the family Spirochaetaceae, Clostridiaceae_1, and Peptostreptococcaeae species. Although no growth performance enhancement was observed, the use of AGP inhibited the potential pathogens in the early growth stage of swine. In addition, our results indicated the ecological succession of swine gut microbiota according to swine weight. Here, we present a characterization of swine gut microbiota with respect to the effects of AGPs on growth performance.
Abstract
Ever since the ban on antibiotic growth promoters (AGPs), the livestock death rate has increased owing to pathogenic bacterial infections. There is a need of developing AGP alternatives; however, the mechanisms by which AGP enhances livestock growth performance are not clearly understood. In this study, we fed 3-week-old swine for 9 weeks with and without AGPs containing chlortetracycline, sulfathiazole, and penicillin to investigate the effects of AGPs on swine gut microbiota. Microbial community analysis was done based on bacterial 16S rRNA genes using MiSeq. The use of AGP showed no growth promoting effect, but inhibited the growth of potential pathogens during the early growth stage. Our results showed the significant increase in species richness after the stabilization of gut microbiota during the post-weaning period (4-week-old). Moreover, the swine gut microbiota was divided into four clusters based on the distribution of operational taxonomic units, which was significantly correlated to the swine weight regardless of AGP treatments. Taxonomic abundance analysis indicated a negative correlation between host weight and the abundance of the family Prevotellaceae species, but showed positive correlation to the abundance of the family Spirochaetaceae, Clostridiaceae_1, and Peptostreptococcaeae species. Although no growth performance enhancement was observed, the use of AGP inhibited the potential pathogens in the early growth stage of swine. In addition, our results indicated the ecological succession of swine gut microbiota according to swine weight. Here, we present a characterization of swine gut microbiota with respect to the effects of AGPs on growth performance.
참고문헌 (44)
- Awad WA, "Effects of dietary inclusion of probiotic and synbiotic on growth performance, organ weights, and intestinal histomorphology of broiler chickens", Poult. Sci, 88, pp.49~56 (2009)
- Bhandari SK, "Evaluation of alternatives to antibiotics using an Escherichia coli K88+ model of piglet diarrhea: effects on gut microbial ecology", J. Anim. Sci, 86, pp.836~847 (2008)
- Caporaso JG, "Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms", ISME J, 6, pp.1621~1624 (2012)
- Caporaso JG, "Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample", Proc. Natl. Acad. Sci. USA, 108(Suppl 1), pp.4516~4522 (2011)
- Casewell M, "The European ban on growth-promoting antibiotics and emerging consequences for human and animal health", J. Antimicrob. Chemother, 52, pp.159~161 (2003)
- Castillo M, "The response of gastrointestinal microbiota to avilamycin, butyrate, and plant extracts in early-weaned pigs", J. Anim. Sci, 84, pp.2725~2734 (2006)
- Cole JR, "The Ribosomal Database Project: improved alignments and new tools for rRNA analysis", Nucleic Acids Res, 37, pp.D141~D145 (2009)
- Cornick NA, "Tylosin and chlorotetracycline decrease the duration of fecal shedding of E. coli O157:H7 by swine", Vet. Microbiol, 143, pp.417~419 (2010)
- Degnan PH, "Illumina-based analysis of microbial community diversity", ISME J, 6, pp.183~194 (2012)
- Edgar RC, "UCHIME improves sensitivity and speed of chimera detection", Bioinformatics, 27, pp.2194~2200 (2011)
- Flint HJ, "Microbiology: antibiotics and adiposity", Nature, 488, pp.601~602 (2012)
- Foster EK, "METASTATS: behavioral science statistics for Microsoft Windows and the HP49G programmable calculator", Behav. Res. Methods Instrum. Comput, 35, pp.325~328 (2003)
- Foxx-Orenstein AE, "Manipulation of the gut microbiota as a novel treatment strategy for gastrointestinal disorders", Am. J. Gastroenterol. Suppl, 1, pp.41~46 (2012)
- Hoese A, "Chlortetracycline and tylosin runoff from soils treated with antimicrobial containing manure", J. Environ. Sci. Health B, 44, pp.371~378 (2009)
- Holman DB, "Impact of subtherapeutic administration of tylosin and chlortetracycline on antimicrobial resistance in farrow-to-finish swine", FEMS Microbiol. Ecol, 85, pp.1~13 (2013)
- Jernberg C, "Longterm impacts of antibiotic exposure on the human intestinal microbiota", Microbiology, 156, pp.3216~3223 (2010)
- Joy SR, "Fate of antimicrobials and antimicrobial resistance genes in simulated swine manure storage", Sci. Total Environ, 481, pp.69~74 (2014)
- Juntunen P, "Antimicrobial resistance in Campylobacter coli selected by tylosin treatment at a pig farm", Vet. Microbiol, 146, pp.90~97 (2010)
- Kalmokoff M, "Continuous feeding of antimicrobial growth promoters to commercial swine during the growing", finishing phase does not modify faecal community erythromycin resistance or community structure, 2011, pp.110, 1414~1425
- Kamada N, "Regulated virulence controls the ability of a pathogen to compete with the gut microbiota", Science, 336, pp.1325~1329 (2012)
- Karlsson F, "Occurrence of Treponema spp. in porcine skin ulcers and gingiva", Vet. Microbiol, 165, pp.402~409 (2013)
- Kim HB, "Longitudinal investigation of the agerelated bacterial diversity in the feces of commercial pigs", Vet. Microbiol, 153, pp.124~133 (2011)
- Kim HB, "Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin", Proc. Natl. Acad. Sci. USA, 109, pp.15485~15490 (2012)
- Konstantinov SR, "Feeding of Lactobacillus sobrius reduces Escherichia coli F4 levels in the gut and promotes growth of infected piglets", FEMS Microbiol. Ecol, 66, pp.599~607 (2008)
- Kozich JJ, "Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform", Appl. Environ. Microbiol, 79, pp.5112~5120 (2013)
- Looft T, "Carbadox has both temporary and lasting effects on the swine gut microbiota", Front. Microbiol, 5, pp.276~ (2014)
- Looft T, "In-feed antibiotic effects on the swine intestinal microbiome", Proc. Natl. Acad. Sci. USA, 109, pp.1691~1696 (2012)
- Lowenthal JW, "Avian cytokines − the natural approach to therapeutics", Dev. Comp. Immunol, 24, pp.355~365 (2000)
- Marshall BM, "Food animals and antimicrobials:impacts on human health", Clin. Microbiol. Rev, 24, pp.718~733 (2011)
- May KD, "Granulated lysozyme as an alternative to antibiotics improves growth performance and small intestinal morphology of 10-day-old pigs", J. Anim. Sci, 90, pp.1118~1125 (2012)
- Norris V, "Hypothesis: bacteria control host appetites", J. Bacteriol, 195, pp.411~416 (2013)
- Pedersen R, "Characterisation of gut microbiota in Ossabaw and Göttingen minipigs as models of obesity and metabolic syndrome", PLoS One, 8, pp.e56612~ (2013)
- Quast C, "The SILVA ribosomal RNA gene database project: improved data processing and Web-based tools", Nucleic Acids Res, 41, pp.D590~D596 (2013)
- Queipo-Ortuno MI, "Gut microbiota composition in male rat models under different nutritional status and physical activity and its association with serum leptin and ghrelin levels", PLoS One, 8, pp.e65465~ (2013)
- Redondo LM, "Perspectives in the use of tannins as alternative to antimicrobial growth promoter factors in poultry", Front. Microbiol, 5, pp.118~ (2014)
- Rettedal E, "Alteration of the ileal microbiota of weanling piglets by the growth-promoting antibiotic chlortetracycline", Appl. Environ. Microbiol, 75, pp.5489~5495 (2009)
- Sarmah AK, "A global perspective on the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment", Chemosphere, 65, pp.725~759 (2006)
- Schloss PD, "Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities", Appl. Environ. Microbiol, 75, pp.7537~7541 (2009)
- Thompson CL, "The immediate environment during postnatal development has long-term impact on gut community structure in pigs", ISME J, 2, pp.739~748 (2008)
- Turnbaugh PJ, "A core gut microbiome in obese and lean twins", Nature, 457, pp.480~484 (2009)
- Turnbaugh PJ, "An obesity-associated gut microbiome with increased capacity for energy harvest", Nature, 444, pp.1027~1031 (2006)
- Upadrasta A, "The effect of dietary supplementation with spent cider yeast on the swine distal gut microbiome", PLoS One, 8, pp.e75714~ (2013)
- Willing BP, "Shifting the balance:antibiotic effects on host-microbiota mutualism", Nat. Rev. Microbiol, 9, pp.233~243 (2011)
- Zhang J, "PEAR: a fast and accurate Illumina Paired-End reAd mergeR", Bioinformatics, 30, pp.614~620 (2014)
