A report of 35 unrecorded bacterial species belonging to the classes Alphaproteobacteria and Betaproteobacteria in Korea
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During a comprehensive investigation of indigenous prokaryotic species in Korea, 25 and 10 bacterial strains assigned to the classes Alphaproteobacteria and Betaproteobacteria, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal field, sea water, sand, rusted iron, and leaf. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with type species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 35 isolates in Korea, they - 25 species of 14 families in the 5 orders of Alphaproteobacteria and 10 species of 3 families in the two orders of Betaproteobacteria - have been reported as unrecorded species in Korea. In addition, Gram reaction, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.
Abstract
During a comprehensive investigation of indigenous prokaryotic species in Korea, 25 and 10 bacterial strains assigned to the classes Alphaproteobacteria and Betaproteobacteria, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal field, sea water, sand, rusted iron, and leaf. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with type species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 35 isolates in Korea, they - 25 species of 14 families in the 5 orders of Alphaproteobacteria and 10 species of 3 families in the two orders of Betaproteobacteria - have been reported as unrecorded species in Korea. In addition, Gram reaction, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.
참고문헌 (8)
- Harbison, A. B., "Micropepsis pineolensis gen. nov., sp. nov., a mildly aci-dophilic Alphaproteobacterium isolated from a poor fen, and proposal of Micropepsaceae fam. nov. within Micro-pepsales ord. nov", International Journal of Systematic and Evolutionary Microbiology, 67, pp.839~844 (2017)
- Kumar, S., "MEGA7 : mole-cular evolutionary genetics analysis version 7. 0 for bigger datasets", Molecular Biology and Evolution, 33, pp.1870~1874 (2016)
- Lee, H. J., "Flavihumibacter solisilvae sp. nov., isolated from forest soil", International Journal of System-atic and Evolutionary Microbiology, 64, pp.2897~2901 (2014)
- Nakai, R., "Oligoflexus tunisiensis gen. nov., sp. nov., a Gram-negative, aerobic, filamentous bacterium of a novel proteobacterial lineage, and description of Oligoflexaceae fam. nov., Oligoflexales ord. nov. and Oligoflexia classis nov", International Journal of Systematic and Evolutionary Microbiology, 64, pp.3353~3359 (2014)
- Sun, C., "Minwuia thermotolerans gen. nov., sp. nov., a marine bacterium forming a deep branch in the Alphaproteobacteria, and proposal of Minwuiaceae fam. nov. and Minwuiales ord. nov", International Journal of Systematic and Evolutionary Microbiology, 68, pp.3856~3862 (2018)
- Thompson, J. D., "The Clustal_X windows inter-face : flexible strategies for multiple sequence alignment aided by quality analysis tools", Nucleic Acids Research, 25, pp.4876~4882 (1997)
- Williams, K. P., "Proposal for a new class within the phylum Proteobacteria, Acidithiobacillia classis nov., with the type order Acidithiobacillales, and emended description of the class Gammaproteobacteria", Internatio-nal Journal of Systematic and Evolutionary Microbiology, 63, pp.2901~2906 (2013)
- Yoon, S. H., "Introducing EzBioCloud: A taxonomically united database of 16S rRNA and whole genome assem-blies", International Journal of Systematic and Evolutionary Microbiology, 67, pp.1613~1617 (2017)