Research Progress on Non-coding RNAs in Cholesteatoma of the Middle Ear

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참고문헌 (124)

1. Luntz M, "Middle ear cholesteatoma", Harefuah, 160(5), pp.316~322 (2021)
2. Rutkowska J, "Cholesteatoma definition and classification : a literature review", J Int Adv Otol, 13(2), pp.266~271 (2017)
3. Castle JT, "Cholesteatoma pearls : practical points and update", Head Neck Pathol, 12(3), pp.419~429 (2018)
4. Maniu A, "Molecular biology of cholesteatoma", Rom J Morphol Embryol, 55(1), pp.7~13 (2014)
5. Mattick JS, "Non-coding RNA", Hum Mol Genet, 1, pp.R17~29 (2006)
6. Siomi MC, "PIWI-interacting small RNAs : the vanguard of genome defence", Nat Rev Mol Cell Biol, 12(4), pp.246~258 (2011)
7. Park JL, "Epigenetic regulation of noncoding RNA transcription by mammalian RNA polymerase III", Epigenomics, 9(2), pp.171~187 (2017)
8. Panni S, "Non-coding RNA regulatory networks", Biochim Biophys Acta Gene Regul Mech, 1863(6), pp.194417~ (2020)
9. Bartel DP, "MicroRNAs : genomics, biogenesis, mechanism, and function", Cell, 116(2), pp.281~297 (2004)
10. Jing Q, "Involvement of microRNA in AU-rich element-mediated mRNA instability", Cell, 120(5), pp.623~634 (2005)
11. Budakoti M, "Micro-RNA : the darkhorse of cancer", Cell Signal, 83, pp.109995~ (2021)
12. Yeo JH, "Many routes to a micro RNA", IUBMB Life, 63(11), pp.972~978 (2011)
13. Wang KC, "Molecular mechanisms of long noncoding RNAs", Mol Cell, 43(6), pp.904~914 (2011)
14. Bai Y, "RNA regulatory networks in animals and plants : a long noncoding RNA perspective", Brief Funct Genomics, 14(2), pp.91~101 (2015)
15. Lasda E, "Circular RNAs : diversity of form and function", RNA, 20(12), pp.1829~1842 (2014)
16. Chen LL, "Regulation of circRNA biogenesis", RNA Biol, 12(4), pp.381~388 (2015)
17. Liang ZZ, "circRNA-miRNA-mRNA regulatory network in human lung cancer : an update", Cancer Cell Int, 20, pp.173~ (2020)
18. He YD, "A urine extracellular vesicle circRNA classifier for detection of high-grade prostate cancer in patients with prostate-specific antigen 2-10 ng", mL at initial biopsy, 2021, pp.20(1), 96~
19. Zang J, "The interaction of circRNAs and RNA binding proteins : an important part of circRNA maintenance and function", J Neurosci Res, 98(1), pp.87~97 (2020)
20. Salmena L, "A ceRNA hypothesis : the Rosetta Stone of a hidden RNA language?", Cell, 146(3), pp.353~358 (2011)
21. Zhang J, "Time to infer miRNA sponge modules", Wiley Interdiscip Rev RNA, 13(2), pp.e1686~ (2022)
22. Lu TX, "MicroRNA", J Allergy Clin Immunol, 141(4), pp.1202~1207 (2018)
23. Croset M, "miRNA-30 family members inhibit breast cancer invasion, osteomimicry, and bone destruction by directly targeting multiple bone metastasis-associated genes", Cancer Res, 78(18), pp.5259~5273 (2018)
24. Liao Z, "Cardiac telocytes inhibit cardiac microvascular endothelial cell apoptosis through exosomal miRNA-21-5p-targeted cdip1 silencing to improve angiogenesis following myocardial infarction", Theranostics, 11(1), pp.268~291 (2021)
25. Kanlikilicer P, "Exosomal miRNA confers chemo resistance via targeting Cav1", p-gp, EBioMedicine, pp.2018, 38[DOI]
26. Xu J, "The mRNA related ceRNA-ceRNA landscape and significance across 20 major cancer types", Nucleic Acids Res, 43(17), pp.8169~8182 (2015)
27. Tay Y, "Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs", Cell, 147(2), pp.344~357 (2011)
28. Zheng H, "The effect of Zbxz23ir-21 NANO(nanomaterials)delivery vector on apoptosis and PTEN(phosphatase and tensin homolog deleted on chromosome ten)", PI3K(Intracellular phosphatidylinositol kinase), Bioengineered, pp.2021, 12(1)[DOI]
29. Friedland DR, "Cholesteatoma growth and proliferation : posttranscriptional regulation by microRNA-21", Otol Neurotol, 30(7), pp.998~1005 (2009)
30. Chen X, "MicroRNA-21 promotes the proliferation and invasion of cholesteatoma keratinocytes", Acta Otolaryngol, 136(12), pp.1261~1266 (2016)
31. Li Y, "Down-regulation of exosomal miR-106b-5p derived from cholesteatoma perimatrix fibroblasts promotes angiogenesis in endothelial cells by overexpression of Angiopoietin 2", Cell Biol Int, 42(10), pp.1300~1310 (2018)
32. Zang J, "Downregulation of MiR-203a disinhibits Bmi1 and promotes growth and proliferation of keratinocytes in cholesteatoma", Int J Med Sci, 15(5), pp.447~455 (2018)
33. Xie S, "Microarray analysis of differentially-expressed microRNAs in acquired middle ear cholesteatoma", Int J Med Sci, 15(13), pp.1547~1554 (2018)
34. Zhang W, "MicroRNA let-7a suppresses the growth and invasion of cholesteatoma keratinocytes", Mol Med Rep, 11(3), pp.2097~2103 (2015)
35. Chen X, "Post-transcriptional regulation by microRNA-21 and let-7a microRNA in paediatric cholesteatoma", J Int Med Res, 39(6), pp.2110~2118 (2011)
36. Li N, "Inflammation-induced miR-802 promotes cell proliferation in cholesteatoma", Biotechnol Lett, 36(9), pp.1753~1759 (2014)
37. Sui R, "MiR-142-5p directly targets cyclin-dependent kinase 5-mediated upregulation of the inflammatory process in acquired middle ear cholesteatoma", Mol Immunol, 141, pp.236~245 (2022)
38. Li Q, "Study of long non-coding RNA HOTAIR expression in middle ear cholesteatoma", Lin Chung Er Bi Yan Hou Tou Jing Wai Ke Za Zhi, 31(4), pp.250~253 (2017)
39. Gao J, "Long noncoding RNAs show differential expression profiles and display ceRNA potential in cholesteatoma pathogenesis", Oncol Rep, 39(5), pp.2091~2100 (2018)
40. Hu Y, "Hsa_circ_0074491 regulates the malignance of cholesteatoma keratinocytes by modulating the PI3K", Akt pathway by binding to miR-22-3p and miR-125a-5p : an observational study, 2021, pp.100(37), e27122~
41. Xie S, "Microarray analysis and functional prediction of differentially expressed circular RNAs in acquired middle ear cholesteatoma", Biomed Eng Online, 20(1), pp.129~ (2021)
42. Gao J, "Comprehensive circular RNA expression profiling with associated ceRNA network reveals their therapeutic potential in cholesteatoma", Oncol Rep, 43(4), pp.1234~1244 (2020)
43. Lee RC, "The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14", Cell, 75(5), pp.843~854 (1993)
44. Denli AM, "Processing of primary microRNAs by the Microprocessor complex", Nature, 432(7014), pp.231~235 (2004)
45. Glaich O, "DNA methylation directs microRNA biogenesis in mammalian cells", Nat Commun, 10(1), pp.5657~ (2019)
46. Leclercq M, "Computational prediction of the localization of microRNAs within their pre-miRNA", Nucleic Acids Res, 41(15), pp.7200~7211 (2013)
47. Treiber T, "Regulation of microRNA biogenesis and its crosstalk with other cellular pathways", Nat Rev Mol Cell Biol, 20(1), pp.5~20 (2019)
48. Mathonnet G, "MicroRNA inhibition of translation initiation in vitro by targeting the cap-binding complex eIF4F", Science, 317(5845), pp.1764~1767 (2007)
49. Rebane A, "MicroRNAs : essential players in the regulation of inflammation", J Allergy Clin Immunol, 132(1), pp.15~26 (2013)
50. Amador-Canizares Y, "miR-122, small RNA annealing and sequence mutations alter the predicted structure of the Hepatitis C virus 5´ UTR RNA to stabilize and promote viral RNA accumulation", Nucleic Acids Res, 46(18), pp.9776~9792 (2018)
51. Lee I, "New class of microRNA targets containing simultaneous 5´-UTR and 3´-UTR interaction sites", Genome Res, 19(7), pp.1175~1183 (2009)
52. Orom UA, "MicroRNA-10a binds the 5´UTR of ribosomal protein mRNAs and enhances their translation", Mol Cell, 30(4), pp.460~471 (2008)
53. Quinn JJ, "Unique features of long non-coding RNA biogenesis and function", Nat Rev Genet, 17(1), pp.47~62 (2016)
54. Kaessmann H, "Origins, evolution, and phenotypic impact of new genes", Genome Res, 20(10), pp.1313~1326 (2010)
55. Fedoseyeva V, "Secondary structure-stretched forms of long intron RNA products from the view point of initiation of chromosome homologs somatic pairing", J Biomol Struct Dyn, 33(4), pp.869~876 (2015)
56. Zucchelli S, "SINEUPs : a new class of natural and synthetic antisense long non-coding RNAs that activate translation", RNA Biol, 12(8), pp.771~779 (2015)
57. Kopp F, "Functional classification and experimental dissection of long noncoding RNAs", Cell, 172(3), pp.393~407 (2018)
58. Jin JJ, "Long noncoding RNA SYISL regulates myogenesis by interacting with polycomb repressive complex 2", Proc Natl Acad Sci U S A, 115(42), pp.E9802~11 (2018)
59. Mathy NW, "A novel long intergenic non-coding RNA, Nostrill, regulates iNOS gene transcription and neurotoxicity in microglia", J Neuroinflammation, 18(1), pp.16~ (2021)
60. Shi X, "Long non-coding RNAs : a new frontier in the study of human diseases", Cancer Lett, 339(2), pp.159~166 (2013)
61. Dykes IM, "Transcriptional and post-transcriptional gene regulation by long non-coding RNA", Genomics Proteomics Bioinformatics, 15(3), pp.177~186 (2017)
62. Sun Q, "Nuclear long noncoding RNAs : key regulators of gene expression", Trends Genet, 34(2), pp.142~157 (2018)
63. Hainer SJ, "Intergenic transcription causes repression by directing nucleosome assembly", Genes Dev, 25(1), pp.29~40 (2011)
64. McHugh CA, "The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3", Nature, 521(7551), pp.232~236 (2015)
65. Engreitz JM, "Local regulation of gene expression by lncRNA promoters, transcription and splicing", Nature, 539(7629), pp.452~455 (2016)
66. Sun TT, "LncRNA GClnc1 promotes gastric carcinogenesis and may act as a modular scaffold of WDR5 and KAT2A complexes to specify the histone modification pattern", Cancer Discov, 6(7), pp.784~801 (2016)
67. Huang W, "LncRNA-mediated DNA methylation : an emerging mechanism in cancer and beyond", J Exp Clin Cancer Res, 41(1), pp.100~ (2022)
68. Wen Z, "LncRNA ANCR promotes hepatocellular carcinoma metastasis through upregulating HNRNPA1 expression", RNA Biol, 17(3), pp.381~394 (2020)
69. Wu SK, "RNA matchmaking in chromatin regulation", Biochem Soc Trans, 48(6), pp.2467~2481 (2020)
70. Yu B, "B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells", Cell, 184(7), pp.1790~1803 (2021)
71. Wan G, "A novel non-coding RNA lncRNA-JADE connects DNA damage signalling to histone H4 acetylation", EMBO J, 32(21), pp.2833~2847 (2013)
72. Guil S, "RNA-RNA interactions in gene regulation : the coding and noncoding players", Trends Biochem Sci, 40(5), pp.248~256 (2015)
73. Erdmann VA, "Regulatory RNAs", Cell Mol Life Sci, 58(7), pp.960~977 (2001)
74. Cui M, "A long noncoding RNA perturbs the circadian rhythm of hepatoma cells to facilitate hepatocarcinogenesis", Neoplasia, 17(1), pp.79~88 (2015)
75. Sanger HL, "Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures", Proc Natl Acad Sci U S A, 73(11), pp.3852~3673 (1976)
76. Hsu MT, "Electron microscopic evidence for the circular form of RNA in the cytoplasm of eukaryotic cells", Nature, 280(5720), pp.339~340 (1979)
77. Cocquerelle C, "Mis-splicing yields circular RNA molecules", FASEB J, 7(1), pp.155~160 (1993)
78. Memczak S, "Circular RNAs are a large class of animal RNAs with regulatory potency", Nature, 495(7441), pp.333~338 (2013)
79. Mehta SL, "Role of circular RNAs in brain development and CNS diseases", Prog Neurobiol, 186, pp.101746~ (2020)
80. Liu X, "Interior circular RNA", RNA Biol, 17(1), pp.87~97 (2020)
81. Kristensen LS, "The biogenesis, biology and characterization of circular RNAs", Nat Rev Genet, 20(11), pp.675~691 (2019)
82. Li J, "CircRNAs : a new target for the diagnosis and treatment of digestive system neoplasms", Cell Death Dis, 12(2), pp.205~ (2021)
83. Xie S, "Non-coding RNAs in gastric cancer", Cancer Lett, 493, pp.55~70 (2020)
84. Zhang C, "Circular RNA circPPM1F modulates M1 macrophage activation and pancreatic islet inflammation in type 1 diabetes mellitus", Theranostics, 10(24), pp.10908~10924 (2020)
85. Xu H, "RNA-Seq profiling of circular RNAs in human colorectal cancer liver metastasis and the potential biomarkers", Mol Cancer, 18(1), pp.8~ (2019)
86. Gu Y, "Circular RNA circIPO11 drives self-renewal of liver cancer initiating cells via Hedgehog signaling", Mol Cancer, 20(1), pp.132~ (2021)
87. Hansen TB, "Natural RNA circles function as efficient microRNA sponges", Nature, 495(7441), pp.384~388 (2013)
88. Rybak-Wolf A, "Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed", Mol Cell, 58(5), pp.870~885 (2015)
89. Chen J, "circPTN sponges miR-145-5p", miR-330-5p to promote proliferation and stemness in glioma, 2019, pp.38(1), 398~
90. Zheng X, "The circRNA circSEPT9 mediated by E2F1 and EIF4A3 facilitates the carcinogenesis and development of triple-negative breast cancer", Mol Cancer, 19(1), pp.73~ (2020)
91. Xu JZ, "circTADA2As suppress breast cancer progression and metastasis via targeting miR-203a-3p", SOCS3 axis, 2019, pp.10(3), 175~
92. Mugoni V, "Circulating RNAs in prostate cancer patients", Cancer Lett, 524, pp.57~69 (2022)
93. Yao Y, "Hsa_circ_0058124 promotes papillary thyroid cancer tumorigenesis and invasiveness through the NOTCH3", GATAD2A axis, 2019, pp.38(1), 318~
94. Bi W, "CircRNA circRNA_102171 promotes papillary thyroid cancer progression through modulating CTNNBIP1-dependent activation of β-catenin pathway", J Exp Clin Cancer Res, 37(1), pp.275~ (2018)
95. Kristensen LS, "Circular RNAs in cancer : opportunities and challenges in the field", Oncogene, 37(5), pp.555~565 (2018)
96. Zhou X, "The functions and clinical significance of circRNAs in hematological malignancies", J Hematol Oncol, 13(1), pp.138~ (2020)
97. Suenkel C, "A highly conserved circular RNA is required to keep neural cells in a progenitor state in the mammalian brain", Cell Rep, 30(7), pp.2170~2179 (2020)
98. Sheng JQ, "Circular RNAs in digestive system cancer : potential biomarkers and therapeutic targets", Am J Cancer Res, 8(7), pp.1142~1156 (2018)
99. Hu W, "Emerging landscape of circular RNAs in lung cancer", Cancer Lett, 427, pp.18~27 (2018)
100. Tang X, "Review on circular RNAs and new insights into their roles in cancer", Comput Struct Biotechnol J, 19, pp.910~928 (2021)
101. Zhong Y, "Circular RNAs function as ceRNAs to regulate and control human cancer progression", Mol Cancer, 17(1), pp.79~ (2018)
102. Fontemaggi G, "New molecular mechanisms and clinical impact of circRNAs in human cancer", Cancers(Basel), 13(13), pp.3154~ (2021)
103. Karreth FA, "ceRNA cross-talk in cancer : when ce-bling rivalries go awry", Cancer Discov, 3(10), pp.1113~1121 (2013)
104. Zhao Y, "MicroRNA response elements-regulated TRAIL expression shows specific survival-suppressing activity on bladder cancer", J Exp Clin Cancer Res, 32(1), pp.10~ (2013)
105. Chen L, "circNUDT21 promotes bladder cancer progression by modulating the miR-16-1-3p", MDM2, Mol Ther Nucleic Acids, pp.2021, 26[DOI]
106. Hollensen AK, "Enhanced tailored MicroRNA sponge activity of RNA Pol II-transcribed TuD hairpins relative to ectopically expressed ciRS7-derived circRNAs", Mol Ther Nucleic Acids, 13, pp.365~375 (2018)
107. Pan Z, "A novel protein encoded by circFNDC3B inhibits tumor progression and EMT through regulating Snail in colon cancer", Mol Cancer, 19(1), pp.71~ (2020)
108. Yang Y, "Novel role of FBXW7 circular RNA in repressing glioma tumorigenesis", J Natl Cancer Inst, 110(3), pp.304~315 (2018)
109. Xia X, "A novel tumor suppressor protein encoded by circular AKT3 RNA inhibits glioblastoma tumorigenicity by competing with active phosphoinositide-dependent Kinase-1", Mol Cancer, 18(1), pp.131~ (2019)
110. Nabet BY, "Exosome RNA unshielding couples stromal activation to pattern recognition receptor signaling in cancer", Cell, 170(2), pp.352~366 (2017)
111. Pefanis E, "RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity", Cell, 161(4), pp.774~789 (2015)
112. Zheng R, "Exosome-transmitted long non-coding RNA PTENP1 suppresses bladder cancer progression", Mol Cancer, 17(1), pp.143~ (2018)
113. Huang X, "Circular RNA circERBB2 promotes gallbladder cancer progression by regulating PA2G4-dependent rDNA transcription", Mol Cancer, 18(1), pp.166~ (2019)
114. Yang F, "Circ-HuR suppresses HuR expression and gastric cancer progression by inhibiting CNBP transactivation", Mol Cancer, 18(1), pp.158~ (2019)
115. Ding L, "Circular RNA circ-DONSON facilitates gastric cancer growth and invasion via NURF complex dependent activation of transcription factor SOX4", Mol Cancer, 18(1), pp.45~ (2019)
116. Du WW, "A circular RNA circ-DNMT1 enhances breast cancer progression by activating autophagy", Oncogene, 37(44), pp.5829~5842 (2018)
117. Chen Y, "Circular RNA circAGO2 drives cancer progression through facilitating HuR-repressed functions of AGO2-miRNA complexes", Cell Death Differ, 26(7), pp.1346~1364 (2019)
118. Hua JT, "Risk SNP-mediated promoter-enhancer switching drives prostate cancer through lncRNA PCAT19", Cell, 174(3), pp.564~575 (2018)
119. Moison M, "The lncRNA APOLO interacts with the transcription factor WRKY42 to trigger root hair cell expansion in response to cold", Mol Plant, 14(6), pp.937~948 (2021)
120. Hu X, "LncRNA NEAT1 recruits SFPQ to regulate MITF splicing and control RPE cell proliferation", Invest Ophthalmol Vis Sci, 62(14), pp.18~ (2021)
121. Muller V, "Interplay of lncRNA H19", miR-675 and lncRNA NEAT1, Mol Oncol, pp.2019, 13(5)[DOI]
122. Yan J, "Sp1-mediated circRNA circHipk2 regulates myogenesis by targeting ribosomal protein Rpl7", Genes(Basel), 12(5), pp.696~ (2021)
123. Du WW, "Identifying and characterizing circRNA-protein interaction", Theranostics, 7(17), pp.4183~4191 (2017)
124. Ma XL, "Doxorubicin-induced novel circRNA_0004674 facilitates osteosarcoma progression and chemoresistance by upregulating MCL1 through miR-142-5p", Cell Death Discov, 7(1), pp.309~ (2021)