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Development of SCAR Marker for Identification of the Perilla Species

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키워드

주제분류농학

초록

This study is to generate SCARs markers for identification of Perilla species. A SCAR is a genomic DNA fragment at a single genetically defined locus that is identified by PCR amplification using a pair of specific oligonucleotide primers. We derived SCARs by sequencing and cloning the both ends of the amplified products of RAPD markers. Sixteen sequence-specific primers were synthesized from eight RAPD markers, which were completely sequenced. We developed the species-specific SCAR markers which could be used successfully in detecting genetic variation in four Perilla species. These markers could be used to verify species-origins of various forms of Perilla germplasms.

Abstract

This study is to generate SCARs markers for identification of Perilla species. A SCAR is a genomic DNA fragment at a single genetically defined locus that is identified by PCR amplification using a pair of specific oligonucleotide primers. We derived SCARs by sequencing and cloning the both ends of the amplified products of RAPD markers. Sixteen sequence-specific primers were synthesized from eight RAPD markers, which were completely sequenced. We developed the species-specific SCAR markers which could be used successfully in detecting genetic variation in four Perilla species. These markers could be used to verify species-origins of various forms of Perilla germplasms.

참고문헌 (8)

  1. Hernandez P, "Development of SCAR markers in olive (Oleaeuropaea) by direct sequencing of RAPD products: applications in olive germplasm evaluation and mapping", Theor. Appl. Genet, 103, pp.788~791 (2001)
  2. 허만규, "Identification of Atractylodes japonica and A. macrocephala by AFLP and SCAR Markers", Horticulture, Environment, and Biotechnology, 48(3), pp.201~205 (2007), 한국원예학회
  3. Ito M, "A Taxonomic Study of Japanese Wild Perilla (Labiatae)", J. Phytogeogr. and Taxon, 44, pp.43~52 (1996)
  4. Ito M, "Phytogenetic analysis of Japanese Perilla species by using DNA polymorphisms", Natural Medicines, 52, pp.248~252 (1998)
  5. Chan-Sik Jung, "Discovery of New Diploid Perilla Species in Korea", 한국육종학회지, 37(3), pp.152~154 (2005), 한국육종학회
  6. Kim CS, "SCARs markers derived from RAPD for cultivar identification in Pyruspyrifolia", J. Kor. Soc. Hort. Sci, 41, pp.125~128 (2000)
  7. Nitta M, "Genetic relationships among two Prerilla crops, shiso and egoma, and the weedy type revealed by RAPD markers", Genes Genet. Syst, 74, pp.43~38 (1999)
  8. Paran I, "Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce", Theor. Appl. Genet, 85, pp.985~993 (1993)

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