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Forensic DNA Analysis for Discrimination of Hybrid Fishes : A Case Report from National Forensic Service, South Korea

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Ssangji carp is a hybrid fish produced by crossbreed of Carassius carassius and Cyprinus carpio (or Cyprinus carpio nudus). In Korea, import of the hybrid fishes is strictly prohibited because the hybrid fishes can destruct the ecosystem by disturbing food-chain as well as by transmitting exotic diseases. However, Ssangji carp produced in a foreign country is illegally being released to fishing places. Therefore we selected two target genes, recombination activating 1 (RAG1) and mitochondrial cytochrome b, for genetic identification of the hybrid fishes and analyzed base sequences of the genes. We found 6 different bases exist when we compared RAG1 gene sequences of C. carassius and C. carpio (or C. carpio nudus). In particular, the hybrid fishes showed double peaks on the 6 base positions indicating expression of both C. carassius and C. carpio (or C. carpio nudus). Maternal line of the fishes was identified by mitochondrial cytochrome b gene. This forensic study provides the forensic analysis method for discrimination of the hybrid fishes.

Abstract

Ssangji carp is a hybrid fish produced by crossbreed of Carassius carassius and Cyprinus carpio (or Cyprinus carpio nudus). In Korea, import of the hybrid fishes is strictly prohibited because the hybrid fishes can destruct the ecosystem by disturbing food-chain as well as by transmitting exotic diseases. However, Ssangji carp produced in a foreign country is illegally being released to fishing places. Therefore we selected two target genes, recombination activating 1 (RAG1) and mitochondrial cytochrome b, for genetic identification of the hybrid fishes and analyzed base sequences of the genes. We found 6 different bases exist when we compared RAG1 gene sequences of C. carassius and C. carpio (or C. carpio nudus). In particular, the hybrid fishes showed double peaks on the 6 base positions indicating expression of both C. carassius and C. carpio (or C. carpio nudus). Maternal line of the fishes was identified by mitochondrial cytochrome b gene. This forensic study provides the forensic analysis method for discrimination of the hybrid fishes.

참고문헌 (16)

  1. M Cebrat, "Mechanism of lymphocyte-specific inactivation of RAG-2 intragenic promoter of NWC: implications for epigenetic control of RAG locus", Mol Immunol, 45, pp.2297~2306 (2008)
  2. CE Willett, "Characterization and expression of the recombination activating genes (rag1 and rag2) of zebrafish", Immunogenetics, 45, pp.394~404 (1997)
  3. H Brinkmann, "Nuclear protein-coding genes support lungfish and not the coelacanth as the closest living relatives of land vertebrates", Proc Natl Acad Sci U S A, 101, pp.4900~4905 (2004)
  4. D Calcagnotto, "Relationships among characiform fishes inferred from analysis of nuclear and mitochondrial gene sequences", Mol Phylogenet Evol, 36, pp.135~153 (2005)
  5. V Slechtova, "Molecular phylogeny of the freshwater fish family Cobitidae (Cypriniformes: Teleostei): delimitation of genera, mitochondrial introgression and evolution of sexual dimorphism", Mol Phylogenet Evol, 47, pp.812~831 (2008)
  6. CB Song, "Phylogenetic relations among percid fishes as inferred from mitochondrial cytochrome b DNA sequence data", Mol Phylogenet Evol, 10, pp.343~353 (1998)
  7. AP Apostolidis, "Phylogenetic relationships among four species of Mullidae (Perciformes) inferred from DNA sequences of mitochondrial cytochrome b and 16S rRNA genes", Biochem Syst Ecol, 29, pp.901~909 (2001)
  8. JD Durand, "Phylogeny and biogeography of the family Cyprinidae in the Middle East inferred from cytochrome b DNA- evolutionary significance of this region", Mol Phylogenet Evol, 22, pp.91~100 (2002)
  9. MD Esposti, "Mitochondrial cytochrome b: evolution and structure of the protein", Biochim Biophys Acta, 1143, pp.243~271 (1993)
  10. V Slechtova, "Families of Cobitoidea (Teleostei; Cypriniformes) as revealed from nuclear genetic data and the position of the mysterious genera Barbucca, Psilorhynchus, Serpenticobitis and Vaillantella", Mol Phylogenet Evol, 44, pp.1358~1365 (2007)
  11. TD Kocher, "Dynamics of mitochondrial DNA evolution in animals:amplification and sequencing with conserved primers", Proc Natl Acad Sci USA, 86, pp.6196~6200 (1989)
  12. TA Hall, "BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95", 98, Nucleic acids symposium series, pp.1999, 41[DOI]
  13. R Sonnenberg, "An evaluation of LSU rDNA D1-D2 sequences for their use in species identification", Front Zool, 4, pp.6~ (2007)
  14. 윤영은, "RAG-1 유전자의 염기서열 분석에 의한 각시붕어 Rhodeus uyekii와 떡납줄갱이 R. notatus 잡종의 동정", 한국양식학회지, 22(1), pp.79~82 (2009), 한국양식학회
  15. Z Peng, "Phylogenetic relationships of glyptosternoid fishes (Siluriformes: Sisoridae)inferred from mitochondrial cytochrome b gene sequences", Mol Phylogenet Evol, 31, pp.979~987 (2004)
  16. GC Johns, "A comparative summary of genetic distances in the vertebrates from the mitochondrial cytochrome b gene", Mol Biol Evol, 15, pp.1481~1490 (1998)

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