Identification of eleven species of the Pleuronectidae family using DNA-based techniques
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Flatfish are one of the largest families in the order Pleuronectiformes and are economically important edible marine fish species. However, they have similar morphological characteristics leading to challenges in classifying correctly, which may result in mislabeling and illegal sales, such as fraudulent labeling of processed food. Therefore, accurate identification is important to ensure the quality and safety of domestic markets in Korea. Species-specific primers were prepared from the mainly consumed eleven species of the order Pleuronectiformes. To rapidly identify the 11 flatfish species, a highly efficient, rapid, multiplex polymerase chain reaction (PCR) with species-specific primers was developed. Species-specific primer sets were designed for the mitochondrial DNA cytochrome c oxidase subunit I gene. Species-specific multiplex PCR (MSS-PCR) either specifically amplified a PCR product of a unique size or failed. This MSS-PCR analysis is easy to perform and yields reliable results in less time than the previous Sanger sequencing methods. This technique could be a powerful tool for the identification of the 11 species b the family Pleuronectidae and can contribute to the prevention of falsified labeling and protection of consumer rights.
Abstract
Flatfish are one of the largest families in the order Pleuronectiformes and are economically important edible marine fish species. However, they have similar morphological characteristics leading to challenges in classifying correctly, which may result in mislabeling and illegal sales, such as fraudulent labeling of processed food. Therefore, accurate identification is important to ensure the quality and safety of domestic markets in Korea. Species-specific primers were prepared from the mainly consumed eleven species of the order Pleuronectiformes. To rapidly identify the 11 flatfish species, a highly efficient, rapid, multiplex polymerase chain reaction (PCR) with species-specific primers was developed. Species-specific primer sets were designed for the mitochondrial DNA cytochrome c oxidase subunit I gene. Species-specific multiplex PCR (MSS-PCR) either specifically amplified a PCR product of a unique size or failed. This MSS-PCR analysis is easy to perform and yields reliable results in less time than the previous Sanger sequencing methods. This technique could be a powerful tool for the identification of the 11 species b the family Pleuronectidae and can contribute to the prevention of falsified labeling and protection of consumer rights.
참고문헌 (21)
- Acar C, "Toxicity of the lessepsian pufferfish Lagocephalus sceleratus from eastern Mediterranean coasts of Turkey and species identification by rapid PCR amplification", Eur Food Res Technol, 243, pp.49~57 (2017)
- Axayácatl RO, "Molecular identification of dolphinfish species(genus Coryphaena)using multiplex haplotype-specific PCR of mitochondrial DNA", Ichthyol Res, 55, pp.389~393 (2008)
- Cohen NJ, "Public health response to puffer fish(tetrodotoxin)poisoning from mislabeled product", J Food Prot, 72, pp.810~817 (2009)
- Hsieh CH, "Puffer fish-based commercial fraud identification in a segment of cytochrome b region by PCR–RFLP analysis", Food Chem, 121, pp.1305~1311 (2010)
- Hsieh YW, "Molecular phylogenetic relationships of puffer fish inferred from partial sequences of cytochrome b gene and restriction fragment length polymorphism analysis", J Agric Food Chem, 52, pp.4159~4165 (2004)
- 강정하, "Rapid Origin Determination of the Northern Mauxia Shrimp (Acetes chinensis) Based on Allele Specific Polymerase Chain Reaction of Partial Mitochondrial 16S rRNA Gene", Animal Bioscience, 28(4), pp.568~572 (2015), 아세아·태평양축산학회[DOI]
- Kim IS, "Synopsis of the suborder Tetraodontoidei(Pisces; Tetraodontiformes)from Korea", Korean J Ichthyol, 2, pp.1~27 (1990)
- 김규헌, "종 특이 프라이머를 이용한 동물성 식품원료의 진위 판별법 개발", 한국식품위생안전성학회지, 29(4), pp.347~355 (2014), 한국식품위생안전성학회
- 김우진, "Development of RAPD-SCAR and RAPD-generated PCRRFLP Markers for Identification of Four Anguilla eel Species", Animal Cells and Systems, 13(2), pp.179~186 (2009), 한국통합생물학회
- 고바라다, "식육감별을 위한 미토콘드리아 12S rRNA와 16S rRNA 유전자의 종 특이적 multiplex PCR 기법 개발", 한국동물위생학회지, 34(4), pp.417~428 (2011), 한국동물위생학회
- 권혁준, "참서대과 (Pisces: Cynoglossidae) 자어 2종의 미토콘드리아 DNA에 의한 형태동정의 타당성", 한국수산과학회지, 43(5), pp.482~488 (2010), 한국수산과학회
- 권혁준, "형태 및 분자분석에 의한 한국산 참서대과 어류(가자미목) 2종의 재동정", 한국수산과학회지, 49(2), pp.208~213 (2016), 한국수산과학회
- 이수정, "한국산 가자미과(가자미목, 어상강) 자어 10종의 분자동정 및 형태기재", 수산해양기술연구, 55(4), pp.335~348 (2019), 한국수산해양기술학회[DOI]
- Lin WF, "A multiplex PCR assay for species identification of raw and cooked bonito", Food Control, 19, pp.879~885 (2008)
- Matsui S, "Genetic divergence among three morphs of Acentrogobius pflaumii(Gobiidae)around Japan and their identification using multiplex haplotype-specific PCR of mitochondrial DNA", Ichthyol Res, 59, pp.216~222 (2012)
- 노은수, "다중 PCR 분석법을 이용한 참서대과 어종의 신속하고 정확한 종판별 분석법 개발", 생명과학회지, 26(9), pp.1007~1014 (2016), 한국생명과학회
- 노은수, "다중 PCR 분석법을 이용한 참조기, 부세, 흑조기 및 긴가이석태의 신속한 종판별법 개발", 생명과학회지, 27(7), pp.746~753 (2017), 한국생명과학회
- Rasmussen RS, "DNA-based methods for the identification of commercial fish and seafood species", Compr Rev Food Sci Food Saf, 7, pp.280~295 (2008)
- Sezaki K, "A simple method to distinguish two commercially valuable eel species in Japan Anguilla japonica and A. Anguilla using polymerase chain reaction strategy with a species-specific primer", Fish Sci, 71, pp.414~421 (2005)
- Silfvergrip AMC, "CITES identification guide to the freshwater eels (Anguillidae): with focus on the European eel Anguilla anguilla" (2009), Swedish Environmental Protection Agency Press
- Ward RD, "The campaign to DNA barcode all fishes, FISH-BOL", J Fish Biol, 74, pp.329~356 (2009)
