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The Complete Mitochondrial Genome of Matsucoccus thunbergianae (Hemiptera: Margarodidae)

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초록

In this study, we have determined mitochondrial genome of Matsucoccus thunbergianae isolated in Korea. The circular mitogenome of M. thunbergianae is 15,406 bp including 13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNAs. AT ratio is 78.2%. Maximum-likelihood and Bayesian inference phylogenetic trees show that M. thunbergianae is clustered with M. matsumurae, and family Margarodidae is clustered with family Pseudococcidae with enough supportive values.

Abstract

In this study, we have determined mitochondrial genome of Matsucoccus thunbergianae isolated in Korea. The circular mitogenome of M. thunbergianae is 15,406 bp including 13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNAs. AT ratio is 78.2%. Maximum-likelihood and Bayesian inference phylogenetic trees show that M. thunbergianae is clustered with M. matsumurae, and family Margarodidae is clustered with family Pseudococcidae with enough supportive values.

참고문헌 (22)

  1. Bae Y, "The complete mitochondrial genome of Aphis gossypii Glover, 1877(Hemiptera : Aphididae)isolated from Plantago asiatica in Korea", Mitochondrial DNA B Resour, 5(3), pp.2878~2880 (2020)
  2. Burger TD, "Phylogenetic analysis of mitochondrial genome sequences indicates that the cattle tick, Rhipicephalus(Boophilus)microplus, contains a cryptic species", Mol. Phylogenetics Evol, 76, pp.241~253 (2014)
  3. Choi NJ, "A comparative analyses of the complete mitochondrial genomes of fungal endosymbionts in Sogatella furcifera, white-backed planthoppers", Int. J. Genom, 2021(1), pp.6652508~ (2021)
  4. Hong KJ, "The complete mitochondrial genome of Aclees taiwanensis Kôno, 1933(Coleoptera : Curculionidae)", Mitochondrial DNA B Resour, 7(8), pp.1460~1462 (2022)
  5. Hu K, "The first complete mitochondrial genome of Matsucoccidae(Hemiptera, Coccoidea)and implications for its phylogenetic position", Biodivers. Data J, 10, pp.e94915~ (2022)
  6. Jung YJ, "The complete mitochondrial genome of Myzus persicae(Sulzer, 1776; Hemiptera : Aphididae)isolated in Korea", Mitochondrial DNA B Resour, 6(1), pp.10~12 (2021)
  7. Katoh K, "MAFFT multiple sequence alignment software version 7 : Improvements in performance and usability", Mol. Biol. Evol, 30(4), pp.772~780 (2013)
  8. Kumar S, "MEGA X: molecular evolutionary genetics analysis across computing platforms", Mol. Biol. Evol, 35(6), pp.1547~ (2018)
  9. Lee H, "The complete mitochondrial genome of Ricania speculum(Walker, 1851)(Hemiptera : Ricaniidae) : investigation of intraspecific variations on mitochondrial genome", Mitochondrial DNA B Resour, 5(3), pp.3796~3798 (2020)
  10. Lee J, "Comprehensive analyses of the complete mitochondrial genome of Figulus binodulus(Coleoptera : Lucanidae)", J. Insect Sci, 20(5), pp.10~ (2020)
  11. Li H, "The sequence alignment", map format and SAMtools, 2009, pp.25(16), 2078~2079
  12. Lim E, "The spread of black pine bast scale, Matsucoccus thunbergianae(Hemiptera : Margarodidae)in Korea", Korean J. Appl. Entomol, 51(1), pp.59~65 (2012)
  13. Miller DR, "A new species of Matsucoccus(Homoptera : Coccoidea : Margarodidae)from Korea", Korean J. Appl. Entomol, 26(2), pp.49~62 (1987)
  14. Mousson L, "Phylogeography of Aedes (Stegomyia) aegypti (L.) and Aedes (Stegomyia) albopictus (Skuse) (Diptera: Culicidae) based on mitochondrial DNA variations", Genome Res, 86(1), pp.1~11 (2005)
  15. Park J, "Complete mitochondrial genome of the gate-keeper ant Colobopsis nipponica(Wheeler, WM, 1928)(Formicidae : Hymenoptera)", Mitochondrial DNA B Resour, 6(1), pp.86~88 (2021)
  16. Park J, "The investigation of intraspecific characteristics and comparative analyses of the complete mitochondrial genome of Stegobium paniceum(Linnaeus, 1758)(Coleoptera : Ptinidae)assembled from public NGS raw reads of the black truffle, Tuber melanosporum", Sci. Prog, 105(1), pp.00368504211072355~ (2022)
  17. Park J, "A new mitochondrial genome of Sogatella furcifera(Horváth)(Hemiptera : Delphacidae)and mitogenome-wide investigation on polymorphisms", Insects, 12(12), pp.1066~ (2021)
  18. Ronquist F, "MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space", Syst. Biol, 61(3), pp.539~542 (2012)
  19. Simon C, "Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers", Ann. Entomol. Soc. Am, 87(6), pp.651~701 (1994)
  20. Zerbino DR, "Velvet : Algorithms for de novo short read assembly using de Bruijn graphs", Genome Res, 18(5), pp.821~829 (2008)
  21. Zhao QY, "Optimizing de novo transcriptome assembly from shortread RNA-Seq data : A comparative study", BMC bioinformatics, 12, pp.1~12 (2011)

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