Comparison of clinical diagnostic performance between commercial RRT-LAMP and RT-qPCR assays for SARS-CoV-2 detection
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초록
The rapid and reliable detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) plays a key role in isolating infected patients and preventing further viral transmission. In this study, we evaluated the clinical diagnostic performances of a commercial real-time reverse transcription loop-mediated isothermal amplification (RRT-LAMP) assay (Isopollo® COVID-2 assay, M-monitor, Daegu, Korea) using eighty COVID-19 suspected clinical samples and compared these with the results of a commercial real-time reverse transcription polymerase chain reaction (RT-qPCR) assay (AllplexTM 2019-nCoV rRT-QPCR Assay, SeeGene, Seoul, Korea). The results of the RRT-LAMP assay targeting the N or RdRp gene of SARS-CoV-2 showed perfect agreement with the RT-qPCR assay results in terms of detection. Furthermore, the RRT-LAMP assay was completed in just within a 20-min reaction time, which is significantly faster than about the 2 h currently required for the RT-qPCR assay, thus enabling prompt decision making regarding the isolation of infected patients. The RRT-LAMP assay will be a valuable tool for rapid, sensitive, and specific detection of SARS-CoV-2 in human or unexpected animal clinical cases.
Abstract
The rapid and reliable detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) plays a key role in isolating infected patients and preventing further viral transmission. In this study, we evaluated the clinical diagnostic performances of a commercial real-time reverse transcription loop-mediated isothermal amplification (RRT-LAMP) assay (Isopollo® COVID-2 assay, M-monitor, Daegu, Korea) using eighty COVID-19 suspected clinical samples and compared these with the results of a commercial real-time reverse transcription polymerase chain reaction (RT-qPCR) assay (AllplexTM 2019-nCoV rRT-QPCR Assay, SeeGene, Seoul, Korea). The results of the RRT-LAMP assay targeting the N or RdRp gene of SARS-CoV-2 showed perfect agreement with the RT-qPCR assay results in terms of detection. Furthermore, the RRT-LAMP assay was completed in just within a 20-min reaction time, which is significantly faster than about the 2 h currently required for the RT-qPCR assay, thus enabling prompt decision making regarding the isolation of infected patients. The RRT-LAMP assay will be a valuable tool for rapid, sensitive, and specific detection of SARS-CoV-2 in human or unexpected animal clinical cases.
참고문헌 (11)
- Baek YH, "Development of a reverse transcription-loop-mediated isothermal amplification as a rapid early-detection method for novel SARS-CoV-2", Emerg Microb Infec, 9(1), pp.998~1007 (2020)
- Carter LJ, "Assay techniques and test development for COVID-19 diagnosis", ACS Cent Sci, 6, pp.591~605 (2020)
- Corman VM, "Detection of 2019 novel coronavirus(2019-nCoV)by real-time RT-PCR", Euro Surveill, 25(3), pp.2000045~ (2020)
- Kitagawa Y, "Evaluation of rapid diagnosis of novel coronavirus disease(COVID-19)using loop-mediated isothermal amplification", J Clin Virol, 129, pp.104446~ (2020)
- Lau YL, "Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of SARS-CoV-2", Peer J, 8, pp.e9278~ (2020)
- Lu X, "US CDC real-time reverse transcription PCR panel for detection of severe acute respiratory syndrome coronavirus 2", Emerg Infect Dis, 26(8), pp.1654~1665 (2020)
- Mahdy MAA, "An overview of SARS-CoV-2 and animal infection", Front Vet Sci, 7, pp.596391~ (2020)
- Rodel J, "Use of the variplexTM SARS-CoV-2 RT-LAMP as a rapid molecular assay to complement RT-PCR for COVID-19 diagnosis", J Clin Virol, 132, pp.104616~ (2020)
- Thomson D, "Mini review : Recent progress in RT-LAMP enabled COVID-19 detection", Sens Act Rep, 2(1), pp.100017~ (2020)
- van Kasteren PB, "Comparison of seven commercial RT-PCR diagnostic kits for COVID-19", J Clin Virol, 128, pp.104412~ (2020)
- Yan C, "Rapid and visual detection of 2019 novel coronavirus(SARS-CoV-2)by a reverse transcription loop-mediated isothermal amplification assay", Clin Microbiol Infec, 26(6), pp.773~779 (2020)
