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Design, Optimization, and Analytical Performance Evaluation of LAMP-Based Rapid Detection Assay for Severe Fever with Thrombocytopenia Syndrome Virus

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Objectives: Severe Fever with Thrombocytopenia Syndrome Virus (SFTSV), a tick-borne pathogen, presents a growing public health threat in East Asia. Although conventional RT-PCR methods are effective for detection, they are limited by the need for specialized equipment and time-consuming procedures. This study aimed to develop and evaluate a rapid, sensitive, and field-deployable diagnostic method for SFTSV using Loop-Mediated Isothermal Amplification (LAMP). Methods: Twelve sets of LAMP primers were designed to target the RNA-dependent RNA polymerase (L segment) of the SFTSV genome. These primers were screened through stepwise colorimetric LAMP assays to identify the optimal set. The sensitivity and specificity of the selected primer set were evaluated using serial dilutions of SFTSV RNA and a panel of control pathogens. Results: The selected LAMP primer set demonstrated high amplification efficiency, successfully detecting as little as 10 attograms (ag) of SFTSV RNA. Moreover, the primer set showed no cross-reactivity with non-SFTSV samples, confirming its high specificity. Conclusion: The developed LAMP assay provides a rapid and reliable method for SFTSV detection, with potential for use in field settings. This diagnostic tool could enhance early detection and improve outbreak response for SFTSV infections.

Abstract

Objectives: Severe Fever with Thrombocytopenia Syndrome Virus (SFTSV), a tick-borne pathogen, presents a growing public health threat in East Asia. Although conventional RT-PCR methods are effective for detection, they are limited by the need for specialized equipment and time-consuming procedures. This study aimed to develop and evaluate a rapid, sensitive, and field-deployable diagnostic method for SFTSV using Loop-Mediated Isothermal Amplification (LAMP). Methods: Twelve sets of LAMP primers were designed to target the RNA-dependent RNA polymerase (L segment) of the SFTSV genome. These primers were screened through stepwise colorimetric LAMP assays to identify the optimal set. The sensitivity and specificity of the selected primer set were evaluated using serial dilutions of SFTSV RNA and a panel of control pathogens. Results: The selected LAMP primer set demonstrated high amplification efficiency, successfully detecting as little as 10 attograms (ag) of SFTSV RNA. Moreover, the primer set showed no cross-reactivity with non-SFTSV samples, confirming its high specificity. Conclusion: The developed LAMP assay provides a rapid and reliable method for SFTSV detection, with potential for use in field settings. This diagnostic tool could enhance early detection and improve outbreak response for SFTSV infections.

관련 논문AI추천

Portable RT-LAMP Platform for Rapid Point-of-Care Detection for SFTSVAn Se Hee, Baek Yun Hee, Batool Sania, Choi Young Ki, Jain Aman, Kim Beom Kyu, Kim Do Hyung, Lee Dong Gyu, Lee Gi Chan, Lee Hui je, Lee Ju Ryeong, Min Seong Cheol, Park Ji-Hyun, Song Min-Suk한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2025 · 제35권 Simple, Rapid and Sensitive Portable Molecular Diagnosis of SFTS Virus Using Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP)권진정, 권혁일, 김석용, 김영일, 김은하, 박수진, 백윤희, 송민석, 안수정, 유민아, 전효순, 정주환, 정혜원, 최영기, 최원석, Khristine Joy C. Antigua, Khristine Kaith S. Lloren한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2018 · 제28권 제11호Comparison Between the SFTS-QS Kit and the PowerChek SFTSV Real-time PCR Kit for the Detection of Severe Fever With Thrombocytopenia Syndrome Virus유인영, Hee Jae Huh, Ji-Youn Kim, Nam Yong Lee, Young Kyung Yoon대한진단검사의학회 · Annals of Laboratory Medicine2020 · 제40권 제4호구제역바이러스 신속진단을 위한 pan-serotype reverse transcription loop-mediated isothermal amplification (RT-LAMP) 진단법구복경, 김지정, 김혜령, 나진주, 박민지, 박선영, 박유리, 박최규, 위성환, 유소윤, 이형우, 임다래, 전보영, 전효성한국동물위생학회 · 한국동물위생학회지2018 · 제41권 제1호Simple and rapid colorimetric detection of African swine fever virus by loop-mediated isothermal amplification assay using a hydroxynaphthol blue metal indicator박최규, 전보영, Ha-Kyung Chae, Hye-Ryung Kim, Ji-Hoon Park, Jonghyun Park, Young S. Lyoo한국동물위생학회 · 한국동물위생학회지2022 · 제45권 제1호Reverse transcription loop-mediated isothermal amplification assay for the rapid and simultaneous detection of H5 and other subtypes of avian influenza viruses강대영, 김은미, 박유리, 박최규, 여상건, 한도현한국동물위생학회 · 한국동물위생학회지2017 · 제40권 제1호

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