들깨 종간 교잡(Perilla citriodora × P. hirtella) 집단의 양적 형질 유전자좌 분석
Detection of QTLs in an Interspecific Cross between Perilla citriodora × P. hirtella Mapping Population
1
조회
0
다운로드
4
인용
0
참고문헌
키워드
초록
An interspecific cross between P. citriodora and P. hirtella constitutes ideal material for a linkage map construction in genome project of Perilla. The chromosomes of the species are same with n=10 and progenies of the cross are normal in growth and seed set. The phenotype of F2 population of the cross are normally distributed and this is a proof of high affinity of the chromosomes during their sexual reproduction. Rosmarinic acid, Luteolin and Apigenin contents of F2 plants were distributed in similar range with tetraploid perilla cultivars. Luteolin and Apigenin are positively correlated with correlation coefficient of 0.762. 21 QTLs were detected in agronomic traits and Rosmarinic acid, Luteolin and Apigenin contents. Even though Luteolin and Apigenin are positively correlated, QTLs were located in different position. Purple leaf color related QTL was mapped in Chromosome 3 with LOD of 14.3, PVE of 50.4%. Three anthocyanin biosynthesis transcription factor like sequences, WD40 repeat-like superfamily protein, myb domain protein 43 and basic helix-loop-helix (bHLH) DNA-binding superfamily protein, were detected near from the QTL.
Abstract
An interspecific cross between P. citriodora and P. hirtella constitutes ideal material for a linkage map construction in genome project of Perilla. The chromosomes of the species are same with n=10 and progenies of the cross are normal in growth and seed set. The phenotype of F2 population of the cross are normally distributed and this is a proof of high affinity of the chromosomes during their sexual reproduction. Rosmarinic acid, Luteolin and Apigenin contents of F2 plants were distributed in similar range with tetraploid perilla cultivars. Luteolin and Apigenin are positively correlated with correlation coefficient of 0.762. 21 QTLs were detected in agronomic traits and Rosmarinic acid, Luteolin and Apigenin contents. Even though Luteolin and Apigenin are positively correlated, QTLs were located in different position. Purple leaf color related QTL was mapped in Chromosome 3 with LOD of 14.3, PVE of 50.4%. Three anthocyanin biosynthesis transcription factor like sequences, WD40 repeat-like superfamily protein, myb domain protein 43 and basic helix-loop-helix (bHLH) DNA-binding superfamily protein, were detected near from the QTL.
참고문헌 (25)
- Borevitz JO, "Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis", Plant Cell, 12, pp.2383~2393 (2000)[DOI]
- Dubos C, "MYB transcription factors in Arabidopsis", Trends Plant Sci, 15, pp.573~581 (2010)[DOI]
- Fukushima A, "High-throughput sequencing and de novo assembly of red and green forms of the Perilla frutescens var. crispa transcriptome", PLoS One, 10, pp.1~18 (2015)
- Gonzalez A, "Regulation of the anthocyanin biosynthetic pathway by the TTG1", bHLH, Plant J, pp.2008, 53[DOI]
- Honda G, "Chemotaxonomic and cytogenetic studies on Perilla frutescens var. citriodora ("Lemon Egoma")", Natural medicines, 48, pp.185~190 (1994)
- Hu Y, "Primary identifications and palynological observations of Perilla in China", J Syst Evol, 48, pp.133~145 (2010)[DOI]
- Ito M, "Morphological characteristics and seed fertility of hybrids and amphidiploids of japanese wild Perilla", Natural medicines, 53, pp.123~129 (1999)
- Ito M, "Perilla frutescens var. frutescens in northern Laos", Journal of Natural Medicines, 62, pp.251~258 (2008)[DOI]
- Chan-Sik Jung, "Discovery of New Diploid Perilla Species in Korea", 한국육종학회지, 37(3), pp.152~154 (2005), 한국육종학회
- 정찬식, "들깨속의 수분 및 수정 생리현상에 관한 연구", 한국작물학회지, 51(5), pp.420~424 (2006), 한국작물학회
- Kim HU, "Transcriptome analysis and identification of genes associated with <TEX>${\omega}$<", TEX>-3 fatty acid biosynthesis in Perilla frutescens (L.) var frutescens, 2016, pp.17, 474~492
- 김지은, "De novo gene set assembly of the transcriptome of diploid, oilseed-crop species Perilla citriodora", Journal of Plant Biotechnology, 43(3), pp.293~301 (2016), 한국식물생명공학회
- Lee JK, "Geographic differentiation of morphological characters among Perilla crops and their weedy types in East Asia", Breed Sci, 51, pp.247~255 (2001)[DOI]
- 이명희, "속잎이 잘 자라고 수량이 높은 잎들깨 신품종 ‘소임’", 한국육종학회지, 46(2), pp.178~182 (2014), 한국육종학회[DOI]
- 이명희, "기름함량이 높은 종실용 들깨 신품종 ‘다유’", 한국육종학회지, 43(6), pp.616~619 (2011), 한국육종학회
- 이명희, "Variation of Caffeic acid, Rosmarinic acid, Luteolin and Apigenin Contents in Perilla Germplasm", 한국육종학회지, 41(4), pp.391~396 (2009), 한국육종학회
- Mizuno H, "Expression of flavone synthase ii and flavonoid 3'-hydroxylase is associated with color variation in tan-colored injured leaves of sorghum", Front Plant Sci, 7, pp.10~ (2016)
- Mo J-S, "The complete chloroplast genome sequence of Perilla citriodora (Makino) Nakai", Mitochondrial DNA Part A, 28, pp.131~132 (2016)
- Nitta M, "The Distribution of Perilla Species", Genetic Resources and Crop Evolution, 52, pp.797~804 (2005)[DOI]
- 2.0.CO;2,
- Pandey A, "Diversity distribution and collection of genetic resources of cultivated and weedy type in Perilla frutescens (L.) Britton var. frutescens and their uses in Indian Himalaya", Genetic Resources and Crop Evolution, 55, pp.883~892 (2008)[DOI]
- Seong ES, "Expressed sequence tags analysis and design of simple sequence repeats markers from a full-length cDNA library in Perilla frutescens (L.)", Int J Genomics, 2015 (2015)
- Shi MZ, "Biosynthesis and metabolic engineering of anthocyanins in Arabidopsis thaliana", Recent Patents on Biotechnology, 8, pp.47~60 (2014)[DOI]
- Stracke R, "The R2R3-MYB gene family in Arabidopsis thaliana", Curr Opin Plant Biol, 4, pp.447~456 (2001)[DOI]
- 우수연, "Collection and Evaluation of Genetic Variation of Perilla Accessions in the Jeju Island", Plant Breeding and Biotechnology, 4(1), pp.87~98 (2016), 한국육종학회[DOI]
