Comparison Chosen DFT Methods with Six Basis Sets on Harmine Molecule
2
조회
0
다운로드
0
인용
0
참고문헌
키워드
초록
The effect of the DFT methods and basis sets on harmine molecule has been investigated. 26 DFT methods with 6 basis sets were used. Two main comparison chosen DFT methods in this work has been investigated. It is concluded that this contribution is very important and cannot be neglected. In the following analysis, changes in energy levels were investigated by two different methods. Considering a specific basis set, changes in energy levels were obtained using different DFT methods. A specific DFT method is chosen and changes in energy levels have been investigated by means of various basis sets. Effect of the choice of basis sets on geometrical parameters on harmine molecule has also been investigated.
Abstract
The effect of the DFT methods and basis sets on harmine molecule has been investigated. 26 DFT methods with 6 basis sets were used. Two main comparison chosen DFT methods in this work has been investigated. It is concluded that this contribution is very important and cannot be neglected. In the following analysis, changes in energy levels were investigated by two different methods. Considering a specific basis set, changes in energy levels were obtained using different DFT methods. A specific DFT method is chosen and changes in energy levels have been investigated by means of various basis sets. Effect of the choice of basis sets on geometrical parameters on harmine molecule has also been investigated.
참고문헌 (35)
- Capelle, K., "Bird’s-Eye View of Density-Functional Theory", Braz. J. Phy, 36 (2006)
- Burke, K., "Perspective on Density Functional Theory", J. Chem. Phy, pp.150901~ (2012)
- Nedelec, J. M., "Effect of Basis Set and of Electronic Correlation on Silica Rings", J. Non-Cryst. Solids, 277, pp.106~113 (2000)
- Murray, T. D., "Alcohol Withdrawal", Va. Med. Q, 124, pp.184~187 (1997)
- Brierley, D. I., "Developments in Harmine Pharmacology Implications for Ayahuasca Use and Drug-dependence Treatment", Progress in Neuro-Psychopharmacology & Biological Psychiatry 2012, 39, pp.263~272 (2012)
- Almbladh, C. O., , Phys. Rev, 1331, pp.3231~ (1985)
- Perez Martin, J. M., "Ultrastructural Changes Induced in HeLa Cells After Phototoxic Treatment with Harmine", J. Appl. Toxicol, 24, pp.197~201 (2004)
- Levy, M., , Phys. Rev, 26, pp.1200~ (1982)
- Kohnand, W., , Phys. Rev, 140, pp.1133~ (1965)
- Ashad, N., "Effect of Peganum Harmala or Its Beta-carboline Alkaloids on Certain Antibiotic Resistant Strains of Bacteria and Protozoa from Poultry", Phytother. Res, 22(11), pp.1533~1538 (2008)
- Shahverdi, A. R., "Antimicrobial Activity and Main Chemical Composition of two Smoke Condensates from Peganum Harmala Seeds. Z. Naturforsch., C", Z. Naturforsch., C: J. Biosci, 60(9), pp.707~ (2005)
- Fortunato, J. J., "A Cute Harmine Administration Induces Antidepressive-like Effects and Increases BDNF Levels in the Rat Hippocampus", Prog. Neuropsychopharmacol Biol. Psychiatry, 33(8), pp.1425~1430 (2009)
- Farzin, D., "Effects of Harmane, Norharmane and Harmine on Apomorphine-induced Pecking Behavior in Chick", Mazandaran Uni. Med. Sciences, 19(70), pp.747~ (2009)
- Yonezawa, T., "Harmine, αβ-carboline Alkaloid, Inhibits Osteoclast Differentiation and Bone Resorption in Vitro and in Vivo", Eur J. Pharmacol, 650(2), pp.511~518 (2011)
- "Arch. Biochem. Biophys", 2011, 212~218
- Heshmati, E., "Effects of Halogen Substitution on Watson-Crick Base Pairing: a Possible Mechanism for Radiosensitivity", Bioorg. Med. Chem. Lett, 19(17), pp.5256~5260 (2009)
- Göckler, N., "Harmine Specifically Inhibits Protein Kinase DYRK1A and Interferes with Neurite Formation", FEBS J, 276(21), pp.6324~6237 (2009)
- Jursic, B. S., "Ab initio and Density Functional Theory Studies of the Potential Energy Sarface of the Linc→Linc Isomerization", J. Mol. Struct, 428, pp.42~ (1998)
- Jursic, B. S., "Computing Transitoin State Structures whit Density Functionl Theory Methods", Theoretical and Computational Chemsitry, 4, pp.709~ (1996)
- Jursic, B. S., "Density Functional Theory and Complete Basis Set Ab initio Evaluation of Proton Affinity for Some Selected Chemical System", J. Mol. Struct, 487, pp.194~ (1999)
- Kurita, N., "Correlated Ab initio Molecular Orbital (MP3, MP4) and Density Functional (PW91, MPW91) Studies on the Conformations", J. Mol. Struct, 554, pp.184~ (2000)
- Ozimiski, W., "The Platinum Complexes whit Histamin: Pt(II) (Iodo-Hist) cl2 and Pt(IV) (Hist)2 cl2 Inorg", Chim. Acta, 360, pp.1904~ (2007)
- Becke, A. D., , J. Chem. Phys, 9, pp.5648~ (1993)
- Becke, A. D., , Phys. Rev. A, 38, pp.3098~ (1988)
- Hohenberg, P., , Phys. Rev, 136, pp.864~ (1996)
- Kohn, W., , Phys. Rev, 140, pp.33~ (1965)
- Stater, J. C., "Quantum Theory of Molecules and Solids, In The Self- Consistent Field for Molecular and Solids" (1974), McGraw- Hill
- Kurita, N., "Correlated Ab initio Molecular Orbital (MP3, MP4) and Density Functional (PW91, MPW91) Studies on the Conformations", J. Mol. Struct, 554, pp.184~ (2000)
- Perdew, J. P., , Phys. Rev. B, 33, pp.8822~ (1986)
- Perdew, J. P., , Phys. Rev. B, 45, pp.13244~ (1992)
- Lee, C., , Phys. Rev. B, 37, pp.785~ (1988)
- Miehlich, B., , Chem. Phys. Lett, 157, pp.200~ (1989)
- Perdew, J. P., , Phys. Rev. B, 23, pp.5048~ (1911)
- Vosko, S. H., , Can. J. Phys, 58, pp.1200~ (1980)
- Nedelec, J. M., "Effect of Basise Set and of Electronic Correlation on Silica Rings", Journal of Non- Crystaline Solids, 277, pp.106~ (2000)
