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Unraveling Biohydrogen Production and Sugar Utilization Systems in the Electricigen Shewanella marisflavi BBL25

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Identification of novel, electricity-producing bacteria has garnered remarkable interest because of the various applications of electricigens in microbial fuel cell and bioelectrochemical systems. Shewanella marisflavi BBL25, an electricity-generating microorganism, uses various carbon sources and shows broader sugar utilization than the better-known S. oneidensis MR-1. To determine the sugar-utilizing genes and electricity production and transfer system in S. marisflavi BBL25, we performed an in-depth analysis using whole-genome sequencing. We identified various genes associated with carbon source utilization and the electron transfer system, similar to those of S. oneidensis MR-1. In addition, we identified genes related to hydrogen production systems in S. marisflavi BBL25, which were different from those in S. oneidensis MR-1. When we cultured S. marisflavi BBL25 under anaerobic conditions, the strain produced 427.58 ± 5.85 μl of biohydrogen from pyruvate and 877.43 ± 28.53 μl from xylose. As S. oneidensis MR-1 could not utilize glucose well, we introduced the glk gene from S. marisflavi BBL25 into S. oneidensis MR-1, resulting in a 117.35% increase in growth and a 17.64% increase in glucose consumption. The results of S. marisflavi BBL25 genome sequencing aided in the understanding of sugar utilization, electron transfer systems, and hydrogen production systems in other Shewanella species.

Abstract

Identification of novel, electricity-producing bacteria has garnered remarkable interest because of the various applications of electricigens in microbial fuel cell and bioelectrochemical systems. Shewanella marisflavi BBL25, an electricity-generating microorganism, uses various carbon sources and shows broader sugar utilization than the better-known S. oneidensis MR-1. To determine the sugar-utilizing genes and electricity production and transfer system in S. marisflavi BBL25, we performed an in-depth analysis using whole-genome sequencing. We identified various genes associated with carbon source utilization and the electron transfer system, similar to those of S. oneidensis MR-1. In addition, we identified genes related to hydrogen production systems in S. marisflavi BBL25, which were different from those in S. oneidensis MR-1. When we cultured S. marisflavi BBL25 under anaerobic conditions, the strain produced 427.58 ± 5.85 μl of biohydrogen from pyruvate and 877.43 ± 28.53 μl from xylose. As S. oneidensis MR-1 could not utilize glucose well, we introduced the glk gene from S. marisflavi BBL25 into S. oneidensis MR-1, resulting in a 117.35% increase in growth and a 17.64% increase in glucose consumption. The results of S. marisflavi BBL25 genome sequencing aided in the understanding of sugar utilization, electron transfer systems, and hydrogen production systems in other Shewanella species.

참고문헌 (54)

  1. Long H, "Biomass resources and their bioenergy potential estimation: A review", Renew. Sustain. Energy Rev, 26, pp.344~352 (2013)
  2. Twas, "Sustainable energy for developing countries", SAPI EN. S. Surv. Perspect. Integr. Environ. Soc, 2(1), pp.1~48 (2008)
  3. Khan S, "Footprints of water and energy inputs in food production - Global perspectives", Food Policy, 34, pp.130~140 (2009)
  4. Feng Q, "Treatment of shale gas fracturing wastewater using microbial fuel cells:mixture of aging landfill leachate and traditional aerobic sludge as catholyte", J. Clean. Prod, 269 (2020)
  5. Rabaey K, "Microbial fuel cells: novel biotechnology for energy generation", Trends Biotechnol, 23, pp.291~298 (2005)
  6. Cao Y, "Electricigens in the anode of microbial fuel cells: pure cultures versus mixed communities", Microb. Cell Fact, 18, pp.39~ (2019)
  7. Doyle LE, "Weak electricigens: a new avenue for bioelectrochemical research", Bioresour. Technol, 258, pp.354~364 (2018)
  8. Fan L, "Overview on electricigens for microbial fuel cell", Open Biotechnol. J, 10, pp.398Biote~ (2016)
  9. Pant D, "A review of the substrates used in microbial fuel cells (MFCs) for sustainable energy production", Bioresour. Technol, 101, pp.1533~1543 (2010)
  10. Gurav R, "Utilization of different lignocellulosic hydrolysates as carbon source for electricity generation using novel Shewanella marisflavi BBL25", J. Clean. Prod, 277, pp.124084~ (2020)
  11. Rashid T, "Design and feasibility study of novel paraboloid graphite based microbial fuel cell for bioelectrogenesis and pharmaceutical wastewater treatment", J. Environ. Chem. Eng, 9, pp.104502~ (2021)
  12. Liang P, "One-year operation of 1000-L modularized microbial fuel cell for municipal wastewater treatment", Water Res, 141, pp.1~8 (2018)
  13. Kane AL, "Formate metabolism in Shewanella oneidensis generates proton motive force and prevents growth without an electron acceptor", J. Bacteriol, 198, pp.1337~1346 (2016)
  14. Pinchuk GE, "Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions", Appl. Environ. Microbiol, 77, pp.8234~8240 (2011)
  15. Sinha P, "Biohydrogen production from various feedstocks by Bacillus firmus NMBL-03", Int. J. Hydrog. Energy, 39, pp.7518~7525 (2014)
  16. Asadi N, "Optimization of organosolv pretreatment of rice straw for enhanced biohydrogen production using Enterobacter aerogenes", Bioresour. Technol, 227, pp.335~344 (2017)
  17. Hung CH, "Roles of microorganisms other than Clostridium and Enterobacter in anaerobic fermentative biohydrogen production systems - A review", Bioresour. Technol, 102, pp.8437~8444 (2011)
  18. Xiong J, "Hydrogen production driven by formate oxidation in Shewanella oneidensis MR-1", Appl. Microbiol. Biotechnol, 104, pp.5579~5591 (2020)
  19. Meshulam-Simon G, "Hydrogen metabolism in Shewanella oneidensis MR-1", Appl. Environ. Microbiol, 73, pp.1153~1165 (2007)
  20. Yang C, "Comparative genomics and experimental characterization of N-acetylglucosamine utilization pathway of Shewanella oneidensis", J. Biol. Chem, 281, pp.29872~29885 (2006)
  21. Hunt KA, "Substrate-level phosphorylation is the primary source of energy conservation during anaerobic respiration of Shewanella oneidensis strain MR-1", J. Bacteriol, 192, pp.3345~3351 (2010)
  22. Lee SM, "Engineering of Shewanella marisflavi BBL25 for biomass-based polyhydroxybutyrate production and evaluation of its performance in electricity production", Int. J. Biol. Macromol, 183, pp.1669~1675 (2021)
  23. Gurav R, "Application of macroalgal biomass derived biochar and bioelectrochemical system with Shewanella for the adsorptive removal and biodegradation of toxic azo dye", Chemosphere, 264, pp.128539~ (2021)
  24. Park YL, "Revealing of sugar utilization systems in Halomonas sp. YLGW01and application for poly(3-hydroxybutyrate) production with low-cost medium and easy recovery", Int. J. Biol. Macromol, 167, pp.151~159 (2021)
  25. Park Sol Lee, "Novel Polyhydroxybutyrate-Degrading Activity of the Microbulbifer Genus as Confirmed by Microbulbifer sp. SOL03 from the Marine Environment", Journal of Microbiology and Biotechnology, 32(1), pp.27~36 (2022), 한국미생물·생명공학회[DOI]
  26. Son YS, "Improved bio-hydrogen production by overexpression of glucose-6-phosphate dehydrogenase and FeFe hydrogenase in Clostridium acetobutylicum", Int. J. Hydrogen Energy, 46, pp.36687~36695 (2021)
  27. 이혜수, "Comparative Study of the Difference in Behavior of the Accessory Gene Regulator (Agr) in USA300 and USA400 Community- Associated Methicillin-Resistant Staphylococcus aureus (CA-MRSA)", Journal of Microbiology and Biotechnology, 31(8), pp.1060~1068 (2021), 한국미생물·생명공학회[DOI]
  28. Jeon JM, "Isobutanol production from an engineered Shewanella oneidensis MR-1", Bioprocess Biosyst. Eng, 38, pp.2147~2154 (2015)
  29. Cho JY, "Polyhydroxyalkanoates (PHAs) degradation by the newly isolated marine Bacillus sp. JY14", Chemosphere, 283, pp.131172~ (2021)
  30. Park YL, "Fructose based hyper production of poly-3-hydroxybutyrate from Halomonas sp. YLGW01 and impact of carbon sources on bacteria morphologies", Int. J. Biol. Macromol, 154, pp.929~936 (2020)
  31. Song HS, "Enhanced isobutanol production from acetate by combinatorial overexpression of acetyl-CoA synthetase and anaplerotic enzymes in engineered Escherichia coli", Biotechnol. Bioeng, 115, pp.1971~1978 (2018)
  32. Gurav R, "Utilization of different lignocellulosic hydrolysates as carbon source for electricity generation using novel Shewanella marisflavi BBL25", J. Clean. Prod, 277 (2020)
  33. Heidelberg JF, "Genome sequence of the dissimilatory metal ionreducing bacterium Shewanella oneidensis", Nat. Biotechnol, 20, pp.1118~1123 (2002)
  34. Xiao X, "Shewanella psychrophila sp. nov. and Shewanella piezotolerans sp. nov., isolated from west Pacific deep-sea sediment", Int. J. Syst. Evol. Microbiol, 57, pp.60~65 (2007)
  35. Zhang WJ, "Complete genome sequence of Shewanella benthica DB21MT-2, an obligate piezophilic bacterium isolated from the deepest Mariana Trench sediment", Mar. Genomics, 44, pp.52~56 (2019)
  36. Huang YT, "Genome analysis of multidrug-resistant Shewanella algae isolated from human soft tissue sample", Front. Pharmacol, 9, pp.419~ (2018)
  37. Wang F, "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-see iron reducing bacterium Shewanella piezotolerans WP3", PLoS One, 3, pp.e1937~ (2008)
  38. Piyanuch, "Complete genome sequence of Shewanella sp. strain TH2012, isolated from shrimp in a cultivation pond exhibiting early mortality syndrome", Microbiol. Resour. Announc, 8, pp.e01703-18~ (2019)
  39. Chang RH, "Complete genome sequence of Shewanella marisflavi ECSMB14101, a red pigment synthesizing bacterium isolated from the East China Sea", Mar. Genomics, 58, pp.100846~ (2021)
  40. Li C, "Improved utilization of soybean meal through fermentation with commensal Shewanella sp. MR-7 in turbot (Scophthalmus maximus L.)", Microb. Cell Fact, 18, pp.214~ (2019)
  41. Gorby YA, "Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms", Proc. Natl. Acad. Sci. USA, 103, pp.11358~11363 (2006)
  42. Coursolle D, "The Mtr respiratory pathway is essential for reducing flavins and electrodes in Shewanella oneidensis", J. Bacteriol, 192, pp.467~474 (2010)
  43. Coursolle D, "Reconstruction of extracellular respiratory pathways for iron(III) reduction in Shewanella oneidensis strain MR-1", Front. Microbiol, 3, pp.56~ (2012)
  44. Author N, "Molecular basis of proton motive force generation: structure of formate dehydrogenase", Science, 295, pp.1863~1868 (2002)
  45. Li J, "Complete genome sequence provides insights into the quorum sensing-related spoilage potential of Shewanella baltica 128 isolated from spoiled shrimp", Genomics, 112, pp.736~748 (2020)
  46. Hau HH, "Ecology and biotechnology of the genus Shewanella", Annu. Rev. Microbiol, 61, pp.237~258 (2007)
  47. Liu H, "Microbial electrolysis: novel technology for hydrogen production from biomass", Biofuels, 1, pp.129~142 (2010)
  48. Dawood Z, "Corrosion-enhancing potential of Shewanella putrefaciens isolated from industrial cooling waters", J. Appl. Microbiol, 8, pp.929~936 (1998)
  49. Le Meur S, "Production of medium-chain-length polyhydroxyalkanoates by sequential feeding of xylose and octanoic acid in engineered Pseudomonas putida KT2440", BMC Biotechnol, 12, pp.53~ (2012)
  50. Yang C, "Comparative genomics and experimental characterization of N-acetylglucosamine utilization pathway of Shewanella oneidensis", J. Biol. Chem, 281, pp.29872~ (2006)
  51. Li F, "Engineering Shewanella oneidensis enables xylose-fed microbial fuel cell", Biotechnol. Biofuels, 10, pp.196~ (2017)
  52. Kouzuma A, "Catabolic and regulatory systems in Shewanella oneidensis MR-1 involved in electricity generation in microbial fuel cells", Front. Microbiol, 6, pp.609~ (2015)
  53. Guo WQ, "Optimization of culture conditions for hydrogen production by Ethanoligenens harbinense B49 using response surface methodology", Bioresour. Technol, 100, pp.1192~1196 (2009)
  54. Bhatia SK, "Renewable biohydrogen production from lignocellulosic biomass using fermentation and integration of systems with other energy generation technologies", Sci. Total Environ, 765, pp.144429~ (2021)

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