Biological roles of NAC transcription factors in the regulation of biotic and abiotic stress responses in solanaceous crops
2
조회
0
다운로드
2
인용
0
참고문헌
키워드
초록
Evolutionary studies conducted on NAC (NAM, ATAF1&2, and CUC2) genes for all major groups of land plants, indicate the presence of the NAC subfamilies, even in the early land plants. The varied roles played by NAC proteins in plant growth and development range from the formation of shoot apical meristem, floral organ development, reproduction, lateral shoot development, and defense responses to biotic and abiotic stresses. Considering the value and importance of solanaceous crops, the study of NAC proteins in these plants needs to be intensified. This will help to identify and functionally characterize their promoters, which will subsequently aid in engineering plants with improved performance under stressful conditions. In this review, the functionally characterized NAC transcription factors specific to tomato, potato, tobacco, chili pepper and eggplant (aubergine) are summarized, clearly indicating their biological functions in the defense mechanism of the plants, against biotic and abiotic stresses.
Abstract
Evolutionary studies conducted on NAC (NAM, ATAF1&2, and CUC2) genes for all major groups of land plants, indicate the presence of the NAC subfamilies, even in the early land plants. The varied roles played by NAC proteins in plant growth and development range from the formation of shoot apical meristem, floral organ development, reproduction, lateral shoot development, and defense responses to biotic and abiotic stresses. Considering the value and importance of solanaceous crops, the study of NAC proteins in these plants needs to be intensified. This will help to identify and functionally characterize their promoters, which will subsequently aid in engineering plants with improved performance under stressful conditions. In this review, the functionally characterized NAC transcription factors specific to tomato, potato, tobacco, chili pepper and eggplant (aubergine) are summarized, clearly indicating their biological functions in the defense mechanism of the plants, against biotic and abiotic stresses.
참고문헌 (80)
- Aida M, "Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant", Plant Cell, 9, pp.841~857 (1997)
- Bu Q, "Role of the Arabidopsis thaliana NAC transcription factors ANAC019 and ANAC055 in regulating jasmonic acid-signaled defense responses", Cell Res, 18, pp.756~767 (2008)
- Cenci A, "Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots", Plant Mol Biol, 85, pp.63~80 (2014)
- Collinge M, "Differential induction of two potato genes, Stprx2 and StNAC, in response to infection by Phytophthora infestans and to wounding", Plant Mol Biol, 46, pp.521~529 (2001)
- Delessert C, "The transcription factor ATAF2represses the expression of pathogenesis-related genes in Arabidopsis", Plant J, 43, pp.745~757 (2005)
- Du M, "Closely related NAC transcription factors of tomato differentially regulate stomatal closure and reopening during pathogen attack", Plant Cell, 26, pp.3167~3184 (2014)
- Duval M, "Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily", Plant Molecular Biology, 50, pp.237~248 (2002)
- Fang Y, "Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice", Mol Genet Genomics, 28, pp.547~563 (2008)
- Fu Y, "NtNAC-R1, a novel NAC transcription factor gene in tobacco roots, responds to mechanical damage of shoot meristem", Plant Physiol Biochem, 69, pp.74~81 (2013)
- Fujita M, "A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway", Plant J, 39, pp.863~876 (2004)
- Glazebrook J, "Genes controlling expression of defense responses in Arabidopsis-2001 status", Curr Opin Plant Biol, 4, pp.301~308 (2001)
- Griffiths AJF, "An Introduction to Genetic Analysis", pp.301~339 (2005), WH Freeman
- Guo WL, "Characterization and expression profile of CaNAC2 pepper gene", Front Plant Sci, 6, pp.755~ (2015)
- Han Q, "Identification and expression pattern of one stressresponsive NAC gene from Solanum lycopersicum", Mol Biol Rep, 39, pp.1713~1720 (2012)
- Han QQ, "Structural analysis and tissue-specific expression patterns of a novel salt-inducible NAC transcription factor gene from Nicotiana tabacum cv. Xanthi", J Hortl Sci Biotechnol, 89, pp.700~706 (2015)
- Han QQ, "Studies on the role of the SlNAC3 gene in regulating seed development in tomato (Solanum lycopersicum)", J Hortl Sci Biotechnol, 89, pp.423~429 (2014)
- He XJ, "AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development", Plant J, 44, pp.903~916 (2005)
- Hernandez-Garcia CM, "Identification and validation of promoters and cis-acting regulatory elements", Plant Science, 217-218, pp.109~119 (2014)
- Hirota A, "The auxin-regulated AP2", EREBP gene PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis, 2007, pp.19, 2156~2168
- Hu R, "Comprehensive analysis of NAC domain transcription factor gene family in Populus trichocarpa", BMC Plant Biology, 10, pp.145~ (2010)
- Jin JP, "PlantTFDB 3.0:a portal for the functional and evolutionary study of plant transcription factors", Nucleic Acids Res, 42, pp.D1182~D1187 (2014)[DOI]
- Kaneda T, "The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death" (2009)
- Kikuchi K, "Molecular analysis of the NAC gene family in rice", Mol Gen Genet, 262, pp.1047~1051 (2000)
- Kim S, "Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species", Nature Genetics, 46, pp.270~278 (2014)
- Kleinow T, "NAC domain transcription factor ATAF1 interacts with SNF1-related kinases and silencing of its subfamily causes severe developmental defects in Arabidopsis", Plant Science, 177, pp.360~370 (2009)
- Knapp S, "Tobacco to tomatoes: a phylogenetic perspective on fruit diversity in the Solanaceae", J Exp Botany, 53, pp.2001~2022 (2002)
- Le DT, "Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress", DNA Res, 18(4), pp.263~276 (2011)[DOI]
- Li XD, "Overexpression of a novel NAC-type tomato transcription factor, SlNAM1, enhances the chilling stress tolerance of transgenic tobacco", J Plant Physiol, 204, pp.54~65 (2016)
- Liang XQ, "Suppression of SlNAC1 reduces heat resistance in tomato plants", Biol Plant, 59, pp.92~98 (2015)
- Liu B, "Tomato NAC transcription factor SlSRN1 positively regulates defense response against biotic stress but negatively regulates abiotic stress response", PLoS ONE, 9, pp.e102067~ (2014)
- Lu PL, "A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis", Plant Mol Biol, 63, pp.289~305 (2007)
- Lv X, "Global Expressions Landscape of NAC Transcription Factor Family and Their Responses to Abiotic Stresses in Citrullus lanatus", Scientific Reports, 6, pp.30574~ (2016)
- Ma NN, "The multiple stress-responsive transcription factor SlNAC1improves the chilling tolerance of tomato", Physiologia Plantarum, 149, pp.474~486 (2013)
- Ma HL, "Cloning and expression analysis of an AP2", ERF gene and its responses to phytohormones and abiotic stresses in rice, 2010, pp.17, 1~9
- Ma N, "Overexpression of tomato SlNAC1 transcription factor alters fruit pigmentation and softening", BMC Plant Biol, 14, pp.351~ (2014)
- Matsusoka M, "Molecular analysis of the NAC gene family in rice", Mol Gen Genet, 262, pp.1047~1051 (2000)
- Meng C, "Suppression of tomato SlNAC1 transcription factor delays fruit ripening", J Plant Physiol, 193, pp.88~96 (2016)
- Na C, "Overexpression of the eggplant (Solanum melongena)NAC family transcription factor SmNAC suppresses resistance to bacterial wilt", Scientific Reports, 6, pp.31568~ (2016)
- Nakashima K, "NAC transcription factors in plant abiotic stress responses", BBA, 1819, pp.97~103 (2012)
- Nakashima K, "Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice", Plant J, 51, pp.617~630 (2007)
- Nuruzzaman M, "Roles of NAC transcription factors in the regulation of biotic and abiotic stress responses in plants", Front Microbiol, 4, pp.248~ (2013)
- Nuruzzaman M, "NAC transcription factor family genes are differentially expressed in rice during infections with Rice dwarf virus, Rice black-streaked dwarf virus, Rice grassy stunt virus, Rice ragged stunt virus, and Rice transitory yellowing virus", Front Plant Sci, 6, pp.676~ (2015)
- Oh SK, "Expression of a novel NAC domain-containing transcription factor (CaNAC1) is preferentially associated with incompatible interactions between chili pepper and pathogens", Planta, 222, pp.876~887 (2005)
- Olmstead RG, "A molecular phylogeny of the Solanaceae", Taxon, 57, pp.1159~1181 (2008)
- Olsen AN, "NAC transcription factors: structurally distinct, functionally diverse", Trends Plant Sci, 10, pp.1360~1385 (2005)
- Portis E, "QTL mapping in eggplant reveals clusters of yield-related loci and orthology with the tomato genome", PLoS ONE, 9, pp.e89499~ (2014)
- Puranik S, "NAC proteins: regulation and role in stress tolerance", Trends Plant Sci, 17, pp.369~381 (2012)
- Rushton PJ, "Tobacco transcription factors: novel insights into transcriptional regulation in the solanaceae", Plant Physiol, 147, pp.280~295 (2008)
- Rushton PJ, "WRKY transcription factors", Trends Plant Sci, 15, pp.247~258 (2010)
- Sablowski RW, "A homolog of no apical meristem is an immediate target of the floral homeotic genes APETALA3", PISTILLATA, 1998, pp.92, 93~103
- Saga H, "Identification and characterization of ANAC042, a transcription factor family gene involved in the regulation of camalexin biosynthesis in Arabidopsis", Mol Plant Microbe Interact, 25, pp.684~696 (2012)
- Särkinen T, "A phylogenetic framework for evolutionary study of the nightshades (Solanaceae): a dated 1000-tip tree", BMC Evol Biol, 13, pp.214~ (2013)
- Selth LA, "A NAC domain protein interacts with tomato leaf curl virus replication accessory protein and enhances viral replication", Plant Cell, 17, pp.311~325 (2005)
- Seo PJ, "Cold activation of a plasma membrane-tethered NAC transcription factor induces a pathogen resistance response in Arabidopsis", Plant J, 61, pp.661~671 (2010), Wiley-Blackwell
- Singh AK, "Genome-wide organization and expression profiling of the NAC transcription factor family in potato (Solanum tuberosum L.)", DNA Res, 20, pp.403~423 (2013)
- Smékalová V, "Crosstalk between secondary messengers, hormones and MAPK modules during abiotic stress signalling in plants", Biotechnol Advances, 32, pp.2~11 (2013)
- Song FY, "Characterization and expression analysis of TNAC genes of tomato", Bull Bot Res, 35, pp.898~903 (2015)
- Souer E, "The no apical meristem gene of Petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries", Cell, 85, pp.159~170 (1996)
- Stern S, "Molecular delimitation of clades within New World species of “spiny solanums”(Solanum subg. Leptostemonum)", Taxon, 60, pp.1429~1441 (2011)
- Sun L, "Functions of rice NAC transcriptional factors, ONAC122 and ONAC131, in defense responses against Magnaporthe grisea", Plant Mol Biol, 81, pp.41~56 (2013)
- Tamura K, "MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods", Mol Biol Evol, 28, pp.2731~2739 (2011)
- Ulm R, "Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis", Proc Natl Acad Sci USA, 101, pp.1397~1402 (2004)
- Wang G, "A stress-associated NAC transcription factor (SlNAC35) from tomato plays a positive role in biotic and abiotic stresses", Physiologia Plantarum, 158, pp.45~64 (2016)
- Wang X, "The Arabidopsis ATAF1, a NAC transcription factor, is a negative regulator of defense responses against necrotrophic fungal and bacterial pathogens", Mol Plant-Microbe Interact, 22, pp.1227~1238 (2009)
- Weese TL, "A three-gene phylogeny of the genus Solanum (Solanaceae)", Syst Bot, 32, pp.445~463 (2007)
- Weizao Huang W, "SlNAC1, a stress-related transcription factor, is fine-tuned on both the transcriptional and the post-translational level", New Phytologist, 197, pp.1214~1224 (2013)
- Wu Y, "Dual function of Arabidopsis ATAF1 in abiotic and biotic stress responses", Cell Res, 19, pp.1279~1290 (2009)
- Xu Q, "Molecular characterization of StNAC2 in potato and its overexpression confers drought and salt tolerance", Acta Physiol Plant, 36, pp.1841~ (2014)
- Xu ZY, "The Arabidopsis NAC transcription factor ANAC096 cooperates with bZIP-type transcription factors in dehydration and osmotic stress responses", Plant Cell, pp.254708~254724 (2013)
- Yang R, "Molecular analysis of two salt-responsive NAC-family genes and their expression analysis in tomato", Mol Biol Rep, 38, pp.857~863 (2011)
- Yoshii M, "Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus", Plant J, 57, pp.615~625 (2009)
- Yoshii M, "The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling", Plant J, 61, pp.804~815 (2010)
- You J, "Systematic Analysis and Identification of Stress-Responsive Genes of the NAC Gene Family in Brachypodium distachyon", PLos ONE, 10, pp.e0122027~ (2015)
- Zhao D, "Overexpression of a NAC transcription factor delays leaf senescence and increases grain nitrogen concentration in wheat", Plant Biol (Stuttg), 17, pp.904~913 (2015)
- Zheng XY, "Coronatine promotes Pseudomonas syringae virulence in plants by activating a signaling cascade that inhibits salicylic acid accumulation", Cell Host Microbe, 11, pp.587~596 (2012)
- Zhu M, "Molecular Characterization of Six Tissue-Specific or Stress-Inducible Genes of NAC Transcription Factor Family in Tomato (Solanum lycopersicum)", J Plant Growth Regulation, 33, pp.730~744 (2014)
- Zhu M, "The abiotic stress-responsive NAC-type transcription factor SlNAC4 regulates salt and drought tolerance and stress-related genes in tomato (Solanum lycopersicum)", Plant Cell Rep, 33, pp.1851~1863 (2014)
- Zhu M, "A new tomato NAC (NAM", ATAF1, CUC2) transcription factor, SlNAC4, functions as a positive regulator of fruit ripening and carotenoid accumulation, pp.Plant Cell Physiol, 2014[DOI]
- Zhu T, "Phylogenetic analyses unravel the evolutionary history of NAC proteins in plants", Evolution, 66, pp.1833~1848 (2012)
- Zou C, "Cis-regulatory code of stress-responsive transcription in Arabidopsis thaliana", Proc. Nat. Acad. Sci. USA, 108, pp.14992~14997 (2011)
