엽록체 전장유전체 비교를 통한 PCR 기반의 Solanum brevicaule 특이적 분자마커 개발

키워드

참고문헌 (62)

1. Aversano R, "Genetic stability at nuclear and plastid DNA level in regenerated plants of Solanum species and hybrids", Euphytica, 165, pp.353~361 (2009)
2. Bastia T, "Induction of novel organelle DNA variation and transfer of resistance to frost and Verticillium wilt in Solanum tuberosum through somatic hybridization with 1EBN S", commersonii. Euphytica, 116, pp.1~10 (2000)
3. Bohs L, "Phylogenetic relationships in Solanum(Solanaceae)based on ndhF sequences", Syst Bot, 22, pp.5~17 (1997)
4. Calsa Junior T, "Structural features and transcript-editing analysis of sugarcane (Saccharum officinarum L.) chloroplast genome", Curr Genet, 46, pp.366~373 (2004)
5. Caranta C, "Development of a CAPS marker for the Pvr4 locus : A tool for pyramiding potyvirus resistance genes in pepper", Genome, 42, pp.1111~1116 (1999)
6. Chen L, "Nuclear and cytoplasmic genome components of Solanum tuberosum + S. chacoense somatic hybrids and three SSR alleles related to bacterial wilt resistance", Theor Appl Genet, 126, pp.1861~1872 (2013)
7. Cho KS, "Complete chloroplast genome sequences of Solanum commersonii and its application to chloroplast genotype in somatic hybrids with Solanum tuberosum", Plant Cell Rep, 35, pp.2113~2123 (2016)
8. Cho K-S, "Chloroplast genome sequence of Solanum demissum, a wild tuber-bearing species was completed", Mitochondr DNA Part B, 4, pp.1800~1802 (2019)
9. Cho HM, "Influence of endosperm balance number(EBN)in interploidal and interspecific crosses between Solanum tuberosum dihaploids and wild species", Korean J Breed, 29, pp.154~161 (1997)
10. 조광수, "원형질체 융합을 이용한 감자 육종", Journal of Plant Biotechnology, 41(2), pp.65~72 (2014), 한국식물생명공학회
11. 조광수, "Complete Chloroplast Genome Sequence of Solanum nigrum and Development of Markers for the Discrimination of S. nigrum", Horticulture, Environment, and Biotechnology, 57(1), pp.69~78 (2016), 한국원예학회
12. Cho K-S, "Complete chloroplast genome sequence of tartary Buckwheat (Fagopyrum tataricum) and comparative analysis with common Buckwheat (F. esculentum)", PloS One, 10, pp.e0125332~ (2015)
13. Chung YS, "A test of taxonomic and biogeographic predictivity : resistance to soft rot in wild relatives of cultivated potato", Ecol Epidemiol, 101, pp.205~212 (2011)
14. Chung HJ, "The complete chloroplast genome sequences of Solanum tuberosum and comparative analysis with Solanaceae species identified the presence of a 241-bp in cultivated potato chloroplast DNA sequence", Plant Cell Rep, 25, pp.1369~1379 (2006)
15. Daniell H, "Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes", Theor Appl Genet, 112, pp.1503~1518 (2006)
16. Garcia-Lor A, "A nuclear phylogenetic analysis : SNPs, indels and SSRs deliver new insights into the relationships in the ‘true citrus fruit trees’group(Citrinae, Rutaceae)and the origin of cultivated species", Ann Bot, 111, pp.1~19 (2013)
17. Gargano D, "The complete nucleotide sequence genome of potato (Solanum tuberosum cv. Desiree) chloroplast DNA", the abstract of the 2nd Solanaceae Genome Workshop, pp.107~ (2005)
18. Hardigan MA, "Taxonomy and genetic differentiation among wild and cultivated germplasm of Solanum sect", Petota. Plant Genome, 8, pp.1~ (2015)
19. Hawkes JG, "The potato : Evolution, biodiversity and genetic resources" (1990), Belhaven Press
20. Hosaka K, "Development of a rapid identification method for potato cytoplasm and its use for evaluating Japanese collections", Theor Appl Genet, 125, pp.1237~1251 (2012)
21. Jackson MT, "The importance of the Bolivian wild potato species in breeding for Globodera pallida resistance", Plant Breed, 101, pp.261~268 (1988)
22. Jheng C-F, "The comparative chloroplast genomic analysis of photosynthetic orchids and developing DNA markers to distinguish Phalaenopsis orchids", Plant Sci, 190, pp.62~73 (2012)
23. 김수정, "Development of PCR-based markers for discriminating Solanum berthaultii using its complete chloroplast genome sequence", Journal of Plant Biotechnology, 45(3), pp.207~216 (2018), 한국식물생명공학회
24. 김수정, "PCR-based markers developed by comparison of complete chloroplast genome sequences discriminate Solanum chacoense from other Solanum species", Journal of Plant Biotechnology, 46(2), pp.79~87 (2019), 한국식물생명공학회[DOI]
25. Kim S, "Comparison of the complete chloroplast genome sequences of Solanum stoloniferum with other Solanum species generate PCR-based markers specific for Solanum stoloniferum", J Plant Bioechnol, 47, pp.131~140 (2020)
26. Kim S, "Development of Solanum hougasiispecific markers using the complete chloroplast genome sequences of Solanum species", J Plant Bioechnol, 47, pp.141~149 (2020)
27. Konieczny A, "A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers", Plant J, 4, pp.403~410 (1993)
28. Konovalov F, "A CAPS marker set for mapping in linkage group III of pea (Pisum sativum L.)", Cell Mol Biol Lett, 10, pp.163~171 (2005)
29. Lee J, "A CAPS marker associated with the partial restoration of cytoplasmic male sterility in chili pepper (Capsicum annuum L.)", Mol Breeding, 21, pp.95~104 (2008)
30. Lohse M, "Organellar GenomeDRAW-a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets", Nucleic Acids Res, 41, pp.W575~W581 (2013)
31. Lössl A, "Molecular markers for cytoplasm in potato : male sterility and contribution of different plastid-mitochondrial configurations to starch production", Euphytica, 116, pp.221~230 (2000)
32. Miller JT, "Collapse of species boundaries in the wild potato Solanum brevicaule complex (Solanaceae, S. sect. Petota): molecular data", Pl Syst Evol, 214, pp.103~130 (1999)
33. Mohapatra T, "Random chloroplast segregation and mitochondrial genome recombination in somatic hybrid plants of Diplotaxis catholica + Brassica juncea", Plant Cell Rep, 17, pp.814~818 (1998)
34. Ortiz R, "The importance of endorsperm balance number in potato breeding and the evolution of tuber-bearing Solanum species", Euphytica, 60, pp.105~113 (1992)
35. Palmer JD, "The molecular biology of plastids", pp.5~53 (1991), Academic Press
36. Park T-H, "The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species", Mitochondr DNA Part B, 2, pp.88~89 (2017)
37. Park T-H, "Complete chloroplast genome of the wild diploid potato relative, Solanum brevicaule", Mitochondr DNA Part B, 4, pp.4159~4160 (2019)
38. Park T-H, "Complete chloroplast genome of the wild diploid potato relative, Solanum acaule", Mitochondr DNA Part B, 6, pp.1189~1191 (2021)
39. 박태호, "가지속 식물의 엽록체 전장유전체 비교를 통한 PCR 기반의 Solanum demissum 특이적 분자마커 개발", Journal of Plant Biotechnology, 48(1), pp.18~25 (2021), 한국식물생명공학회[DOI]
40. Park T-H, "The late blight resistance locus Rpi-blb3 from Solanum bulbocastanum belongs to a major late blight R gene cluster on chromosome 4 of potato", Mol Plant-Microb Interact, 18, pp.722~729 (2005)
41. Patel D, "Somatic hybrid plants of Nicotiana x sanderae + N. debneyi with fungal resistance to Peronospora tabacina", Ann Bot, 108, pp.809~819 (2011)
42. Pettenkofer T, "Development of novel Quercus rubra chloroplast genome CAPS markers for haplotype indentification", Silvae Genetica, 69, pp.78~85 (2020)
43. Sarkar D, "Production and characterization of somatic hybrids between Solanum tuberosum L. and S. pinnatisectum Dun", Plant Cell Tiss Org Cult, 107, pp.427~440 (2011)
44. Saski C, "Complete chloroplast genome sequence of Glycine max and comparative analyses with other legume genomes", Plant Mol Biol, 59, pp.309~322 (2005)
45. Schwartz S, "Human-mouse alignments with BLASTZ", Genome Res, 13, pp.103~107 (2003)
46. Scotti N, "Organelle DNA variation in parental Solanum spp. genotypes and nuclear-cytoplasmic interactions in Solanum tuberosum (+) S. commersonii somatic hybrid-backcross progeny", Theor Appl Genet, 108, pp.87~94 (2003)
47. Smilde WD, "Solanum mochiquense chromosome IX carries a novel late blight resistance gene Rpi-moc1", Theor Appl Genet, 110, pp.252~258 (2005)
48. Smyda-Dajmund P, "Genetic composition of interspecific potato somatic hybrids and autofused 4x plants evaluated by DArT and cytoplasmic DNA markers", Plant Cell Rep, 35, pp.1345~1358 (2016)
49. Spooner DM, "Systematics, diversity, genetics, and evolution of wild and cultivated potatoes", Bot Rev, 80, pp.283~383 (2014)
50. Tamura K, "MEGA6 : molecular evolutionary genetic analysis version 6. 0", Mol Biol Evol, 30, pp.2725~2729 (2013)
51. Thieme R, "Characterization of the multiple resistance traits of somatic hybrids between Solanum cardiophyllum Lindl. and two commercial potato cultivars", Plant Cell Rep, 29, pp.1187~1201 (2010)
52. Tillich M, "GeSeq - versatile and accurate annotation of organelle genomes", Nucleic Acids Res, 45, pp.W6~W11 (2017)
53. Tiwari JK, "Genome sequence analysis provides insights on genomic variation and late blight resistance genes in potato somatic hybrid(parents and progeny)", Mol Biol Rep, 48, pp.623~635 (2021)
54. Tu W, "Interspecific potato somatic hybrids between Solanum malmeanum and S. tuberosum provide valuable resources for freezing-tolerance breeding", Plant Cell Tiss Organ Cult, 147, pp.73~83 (2021)
55. Uncu AT, "Development of a SNP-based CAPS assay for the Me1 gene conferring resistance to root knot nematode in pepper", Euphytica, 206, pp.393~399 (2015)
56. van der Voort JR, "Tight physical linkage of the nematode resistance gene Gpa2 and the virus resistance gene Rx on a single segment introgressed from the wild species Solanum tuberosum subsp. andigena CPC 1673 into cultivated potato", Mol Plant-Microb Interact, 18, pp.722~729 (1999)
57. Wang Y, "Development of SNP markers based on transcriptome sequences and their application in germplasm identification in radish (Raphanus sativus L.)", Mol Breeding, 37, pp.26~ (2017)
58. Wang GX, "Production and characterization of interspecific somatic hybrids between Brassica oleracea var. botrytis and B. nigra and their progenies for the selection of advanced pre-breeding materials", Plant Cell Rep, 30, pp.1811~1821 (2011)
59. Xiang F, "Regeneration of somatic hybrids in relation to the nuclear and cytoplasmic genomes of wheat and Setaria italica", Genome, 47, pp.680~688 (2004)
60. Yamaki S, "Development of INDEL markers to discriminate all genome types rapidly in the genus Oryza", Breeding Sci, 63, pp.246~254 (2013)
61. Yu Y, "Genetic and biochemical characterization of somatic hybrids between Bupleurum scorzonerifolium and Gentianopsis paludosa", Protoplasma, 249, pp.1029~1035 (2012)
62. Yurina NP, "Comparative structural organization of plant chloroplast and mitochondrial genomes", Russ J Genet, 34, pp.5~22 (1998)

관련 논문AI추천