RNA-seq profiling of skin in temperate and tropical cattle

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참고문헌 (77)

1. Ahmad N, "Cytochrome P450 : a target for drug development for skin diseases", J Invest Dermatol, 123, pp.417~425 (2004)
2. da Silva RG, "Radiative properties of the skin and haircoat of cattle and other animals", Trans ASAE, 46, pp.913~918 (2003)
3. Schmuth M, "Differential expression of fatty acid transport proteins in epidermis and skin appendages", J Invest Dermatol, 125, pp.1174~1181 (2005)
4. Sertznig P, "Peroxisome proliferator-activated receptors(PPARs)and the human skin : importance of PPARs in skin physiology and dermatologic diseases", Am J Clin Dermatol, 9, pp.15~31 (2008)
5. Horowitz M, "Heat acclimation-mediated cross-tolerance in cardioprotection: do HSP70 and HIF-1α play a role?", Ann NY Acad Sci, 1188, pp.199~206 (2010)
6. Ilatsia ED, "Production objectives and breeding goals of Sahiwal cattle keepers in Kenya and implications for a breeding programme", Trop Anim Health Prod, 44, pp.519~530 (2012)
7. Hansen PJ, "Genetic variation in resistance of the preimplantation bovine embryo to heat shock", Reprod Fertil Dev, 27, pp.22~30 (2014)
8. Shelton M, "Sheep production in hot and arid zones", pp.155~162 (2000), Kuwait Institute for Scientific Research
9. Collier RJ, "Genes involved in the bovine heat stress response", J Dairy Sci, 91, pp.445~454 (2008)
10. Megahed GA, "Influence of heat stress on the cortisol and oxidant-antioxidants balance during oestrous phase in buffalo-cows(Bubalus bubalis) : thermo-protective role of antioxidant treatment", Reprod Domest Anim, 43, pp.672~677 (2008)
11. Andre G, "Quantifying the effect of heat stress on daily milk yield and monitoring dynamic changes using an adaptive dynamic model", J Dairy Sci, 94, pp.4502~4513 (2011)
12. Gebremedhin KG, "Body temperature and behavioral activities of four breeds of heifers in shade and full sun", Appl Eng Agric, 27, pp.999~1006 (2011)
13. St-Pierre NR, "Economic losses from heat stress by US livestock industries", J Dairy Sci, 86, pp.E52~E77 (2003)
14. Wolfenson D, "Impaired reproduction in heat-stressed cattle: basic and applied aspects", Anim Reprod Sci, 60-61, pp.535~547 (2000)
15. Di Francesco S, "The effect of season on oocyte quality and developmental competence in Italian Mediterranean buffaloes(Bubalus bubalis)", Anim Reprod Sci, 123, pp.48~53 (2011)
16. Das GK, "Summer anoestrus in buffalo: a review", Reprod Domest Anim, 45, pp.e483~e494 (2010)
17. Gaughan JB, "Assessing the heat tolerance of 17beef cattle genotypes", Int J Biometeorol, 54, pp.617~627 (2010)
18. Hayes BJ, "A validated genome wide association study to breed cattle adapted to an environment altered by climate change", PLoS One, 4, pp.e6676~ (2009)
19. Scholtz MM, "The effect of global warming on beef production in developing countries of the southern hemisphere", Nat Sci, 5, pp.106~119 (2013)
20. Bramanti B, "Ancient DNA analysis of the delta F508mutation", Hum Biol, 75, pp.105~115 (2003)
21. Edwards CJ, "Ancient DNA analysis of 101 cattle remains: limits and prospects", J Archaeol Sci, 31, pp.695~710 (2004)
22. Hoffmann I, "Climate change and the characterization, breeding and conservation of animal genetic resources", Anim Genet, 41, pp.32~46 (2010)
23. Wheelock JB, "Effects of heat stress on energetic metabolism in lactating Holstein cows", J Dairy Sci, 93, pp.644~655 (2010)
24. Brito LF, "Testicular thermoregulation in Bos indicus, crossbred and Bos Taurus bulls: relationship with scrotal, testicular vascular cone and testicular morphology, and effects on semen quality and sperm production", Theriogenology, 61, pp.511~528 (2004)
25. Langmead B, "Ultrafast and memory-efficient alignment of short DNA sequences to the human genome", Genome Biol, 10, pp.R25~ (2009)
26. Oshlack A, "Transcript length bias in RNA-seq data confounds systems biology", Biol Direct, 4, pp.14~ (2009)
27. Robinson MD, "EdgeR : a bioconductor package for differential expression analysis of digital gene expression data", Bioinformatics, 26, pp.139~140 (2010)
28. Benjamini Y, "Controlling the false discovery rate : a practical and powerful approach to multiple testing", J R Stat Soc Series B Methodol, 57, pp.289~300 (1995)
29. Yang TY, "Grouped false-discovery rate for removing the gene-set-level bias of RNAseq", Evol Bioinform Online, 9, pp.467~478 (2013)
30. Starkey L, "Identification of polymorphisms in the promoter region of the bovine heat shock protein gene and associations with bull calf weaning weight", Am Soc Anim Sci South Sect Meet, 85, pp.42~ (2007)
31. Leutenegger CM, "Quantitation of bovine cytokine mRNA in milk cells of healthy cattle by real-time TaqMan polymerase chain reaction", Vet Immunol Immunopathol, 77, pp.275~287 (2000)
32. Ross PJ, "Housekeeping gene transcript abundance in bovine fertilized and cloned embryos", Cell Reprogram, 12, pp.709~717 (2010)
33. Morenikeji OB, "Transcriptome profiling of four candidate milk genes in milk and tissue samples of temperate and tropical cattle", J Genet, 98, pp.25~ (2019)
34. Chiu YH, "RNA polymerase III detects cytosolic DNA and induces type I interferons through the RIG-I pathway", Cell, 138, pp.576~591 (2009)
35. Zevini A, "Crosstalk between cytoplasmic RIG-I and STING sensing pathways", Trends Immunol, 38, pp.194~205 (2017)
36. Pichlmair A, "Innate recognition of viruses", Immunity, 27, pp.370~383 (2007)
37. Ank N, "IFN-lambda : novel antiviral cytokines", J Interferon Cytokine Res, 26, pp.373~379 (2006)
38. Moroi M, "Analysis of the involvement of the von Willebrand factor-glycoprotein Ib interaction in platelet adhesion to a collagen-coated surface under flow conditions", Blood, 90, pp.4413~4424 (1997)
39. Ling C, "Disruption of tissue plasminogen activator gene reduces macrophage migration", Biochem Biophys Res Commun, 349, pp.906~912 (2006)
40. Wojta J, "C5a stimulates production of plasminogen activator inhibitor-1 in human mast cells and basophils", Blood, 100, pp.517~523 (2002)
41. Uutela M, "PDGF-D induces macrophage recruitment, increased interstitial pressure, and blood vessel maturation during angiogenesis", Blood, 104, pp.3198~3204 (2004)
42. Rissanen TT, "VEGF-D is the strongest angiogenic and lymphangiogenic effector among VEGFs delivered into skeletal muscle via adenoviruses", Circ Res, 92, pp.1098~1106 (2003)
43. Ten Kate MK, "Protein S deficiency : a clinical perspective", Haemophilia, 14, pp.1222~1228 (2008)
44. Johnson EN, "Basal transepidermal water loss is increased in platelet-type 12-lipoxygenase deficient mice", J Invest Dermatol, 112, pp.861~865 (1999)
45. Kroumpouzos G, "Functional analysis of the slaty gene product(TRP2)as dopachrome tautomerase and the effect of a point mutation on its catalytic function", Biochem Biophys Res Commun, 202, pp.1060~1068 (1994)
46. Tripathi RK, "Mutational mapping of the catalytic activities of human tyrosinase", J Biol Chem, 267, pp.23707~23712 (1992)
47. Kobayashi T, "Tyrosinase related protein 1 (TRP1) functions as a DHICA oxidase in melanin biosynthesis", EMBO J, 13, pp.5818~5825 (1994)
48. Aberdam E, "Involvement of microphthalmia in the inhibition of melanocyte lineage differentiation and of melanogenesis by agouti signal protein", J Biol Chem, 273, pp.19560~19565 (1998)
49. Cone RD, "The melanocortin receptors : agonists, antagonists, and the hormonal control of pigmentation", Recent Prog Horm Res, 51, pp.287~317 (1996)
50. Furumura M, "The interaction of agouti signal protein and melanocyte stimulating hormone to regulate melanin formation in mammals", Pigment Cell Res, 9, pp.191~203 (1996)
51. Robbins IS, "Pigmentation phenotypes of variant extension locus alleles result from point mutations that alter MSH receptor function", Cell, 72, pp.827~834 (1993)
52. Ajayi OO, "Transcriptomic profiling of bovine skin in tropically-adapted indicine and temperate-adapted taurine cattle using RNA-seq", Paper presented at: 22nd International Conference on Plant and Animal Genomes (2014)
53. Huang C, "Trends for conception rate of Holsteins over time in the Southeastern United States", J Dairy Sci, 92, pp.4617~4641 (2009)
54. Paula-Lopes FF, "Genetic divergence in cellular resistance to heat shock in cattle: differences between breeds developed in temperate versus hot climates in responses of preimplantation embryos, reproductive tract tissues and lymphocytes to increased culture temperatures", Reproduction, 125, pp.285~294 (2003)
55. Lacetera N, "Heat stress elicits different responses in peripheral blood mononuclear cells from Brown Swiss and Holstein cows", J Dairy Sci, 89, pp.4606~4612 (2006)
56. Collier RJ, "Environmental stress and amelioration in livestock production", pp.379~410 (2012), Springer-Verlag
57. Mader TL, "A comprehensive index for assessing environmental stress in animals", J Anim Sci, 88, pp.2153~2165 (2010)
58. Belhadj Slimen I, "Heat stress effects on livestock: molecular, cellular and metabolic aspects, a review", J Anim Physiol Anim Nutr, 100, pp.401~412 (2016)
59. Fang X, "14,15-Dihydroxyeicosatrienoic acid activates peroxisome proliferator-activated receptor-α", Am J Physiol Heart Circ Physiol, 290, pp.H55~H63 (2006)
60. Howard JT, "Beef cattle body temperature during climatic stress : a genome-wide association study", Int J Biometeorol, 58, pp.1665~1672 (2014)
61. Hoffmann I, "Adaptation to climate change-exploring the potential of locally adapted breeds", Animal, 7, pp.346~362 (2013)
62. Satoh T, "Structure, function and regulation of carboxylesterases", Chem Biol Interact, 162, pp.195~192 (2006)
63. Walsh G, "Biopharmaceuticals and biotechnology medicines: an issue of nomenclature", Eur J Pharm Sci, 15, pp.135~138 (2002)
64. Szwajkowska M, "Bovine milk proteins as the source of bioactive peptides influencing the consumers’ immune system : a review", Anim Sci Pap Rep, 29, pp.269~280 (2011)
65. Hanusova E, "Genetic variants of beta-casein in holstein dairy cattle in Slovakia", Slovak J Anim Sci, 43, pp.63~66 (2010)
66. Keating AF, "A note on the evaluation of a beta-casein variant in bovine breeds by allele-specific PCR and relevance to β-casomorphin", Irish J Agric Food Res, 47, pp.99~104 (2008)
67. Johnston DJ, "Integration of DNA markers into breed plan EBVs", Proceedings of Association Advancement of Animal Breeding and Genetics, 18, pp.30~33 (2009)
68. Lewis-Ballester A, "Molecular basis for catalysis and substrate-mediated cellular stabilization of human tryptophan 2, 3-dioxygenase", Sci Rep, 6, pp.35169~ (2016)
69. Rhoads ML, "Effects of heat stress and plane of nutrition on lactating Holstein cows: I. production, metabolism, and aspects of circulating somatotropin", J Dairy Sci, 92, pp.1986~1997 (2009)
70. Pilotte L, "Reversal of tumoral immune resistance by inhibition of tryptophan 2, 3-dioxygenase", Proc Natl Acad Sci USA, 109, pp.2497~2502 (2012)
71. Niture SK, "Nrf2 signaling and cell survival", Toxicol Appl Pharmacol, 244, pp.37~42 (2010)
72. Yoshihara M, "Retrograde signaling by Syt 4 induces presynaptic release and synapse-specific growth", Science, 310, pp.858~863 (2005)
73. Adolfsen B, "Synaptotagmins are trafficked to distinct subcellular domains including the postsynaptic compartment", J Cell Biol, 166, pp.249~260 (2004)
74. Renaudeau D, "Adaptation to hot climate and strategies to alleviate heat stress in livestock production", Animal, 6, pp.707~728 (2012)
75. Volanakis JE, "The human complement system in health and disease", pp.9~32 (1998), CRC Press
76. Arai I, "Prostanoid DP1receptor agonist inhibits the pruritic activity in NC", Nga mice with atopic dermatitis, 2004, pp.505, 229~235
77. Johnson HD, "Role of heat tolerance and production level in responses of lactating Holsteins to various temperature-humidity conditions", J Dairy Sci, 44, pp.1191~ (1961)

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