한국 근해 태평양난바다곤쟁이(Euphausia pacifica)의 유전적 개체군 구조
Genetic Population Structure of Euphausia pacifica in Korean Waters
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초록
We investigated Euphausia pacifica population in Korean waters in 2016 By samplings for genetic structur at five stations. Three sampling stations were located in the middle of the water masses which were clustered by temperature and salinity whereas the other stations were at the boundaries of the water masses. We amplified a 566 bp region and compared it with sequences of E. pacifica distributed in other waters. Sequences were classified two clades, and a clade was formed in the station E. Genetic distance of station E was close to E. pacifica present in Bering Sea, while it was distant to E. pacifica present in Yellow Sea near China. In genetic analysis, seven haplotypes were formed. Hap-1 and Hap-2 were shared in all five stations, while Hap-3 was shared in station W and WS. Four independent haplotypes were present in station E. Haplotype and nucleotide diversity were the highest in station E and the lowest in station S. The FST distances between station E and other stations were the highest, but distances among other stations were low. As a result, we concluded that E. pacifica, which is distributed in Korean waters, has a genetic population differentiation in the East Sea (station E).
Abstract
We investigated Euphausia pacifica population in Korean waters in 2016 By samplings for genetic structur at five stations. Three sampling stations were located in the middle of the water masses which were clustered by temperature and salinity whereas the other stations were at the boundaries of the water masses. We amplified a 566 bp region and compared it with sequences of E. pacifica distributed in other waters. Sequences were classified two clades, and a clade was formed in the station E. Genetic distance of station E was close to E. pacifica present in Bering Sea, while it was distant to E. pacifica present in Yellow Sea near China. In genetic analysis, seven haplotypes were formed. Hap-1 and Hap-2 were shared in all five stations, while Hap-3 was shared in station W and WS. Four independent haplotypes were present in station E. Haplotype and nucleotide diversity were the highest in station E and the lowest in station S. The FST distances between station E and other stations were the highest, but distances among other stations were low. As a result, we concluded that E. pacifica, which is distributed in Korean waters, has a genetic population differentiation in the East Sea (station E).
참고문헌 (32)
- D. L. Aksnes, "Circulation patterns in the North Atlantic and possible impact on the population of Calanus finmarchicus", Ophelia, 44(1-3), pp.7~28 (1996), Informa UK Limited[DOI]
- Baker AC, "A Practical Guide to the Euphausiids of the World", pp.96~ (1990), Natural History Museum Publication
- A. S. Brierley, "Potential for long-distance dispersal of Euphausia crystallorophias in fast current jets", Marine Biology, 135(1), pp.77~82 (1999), Springer Science and Business Media LLC[DOI]
- Brinton E, "Population biology of Euphausia pacifica off southern Califonia", Fish Bull, 74, pp.733~762 (1976)
- Ann Bucklin, "Gene flow patterns of the euphausiid, Meganyctiphanes norvegica, in the NW Atlantic based on mtDNA sequences for cytochrome b and cytochrome oxidase I", Journal of Plankton Research, 19(11), pp.1763~1781 (1997), Oxford University Press (OUP)[DOI]
- A Bucklin, "Population genetic variation of Calanus finmarchicus in Icelandic waters: preliminary evidence of genetic differences between Atlantic and Arctic populations", ICES Journal of Marine Science, 57(6), pp.1592~1604 (2000), Oxford University Press (OUP)[DOI]
- Ann Bucklin, "DNA barcodes for species identification of euphausiids (Euphausiacea, Crustacea)", Journal of Plankton Research, 29(6), pp.483~493 (2007), Oxford University Press (OUP)[DOI]
- Chen-Tung Arthur Chen, "Chemical and physical fronts in the Bohai, Yellow and East China seas", Journal of Marine Systems, 78(3), pp.394~410 (2009), Elsevier BV[DOI]
- W. Grant, "Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation", Journal of Heredity, 89(5), pp.415~426 (1998), Oxford University Press (OUP)[DOI]
- Guerao G, "GROWTH AND REPRODUCTIVE BIOLOGY OF PALAEMON XIPHIAS RISSO, 1816 (DECAPODA: CARIDEA: PALAEMONIDAE)", Journal of Crustacean Biology, 14(2), pp.280~288 (1994), Oxford University Press (OUP)[DOI]
- Hall TA, "BioEdit, a user-friendly biological sequence alignment editor and analysis program for Windows 95", 98, Nucleic Acids Symp Ser, pp.1999, 41[DOI]
- Harkins GW, "Studies on the population genetics of euphausiids, a comparison of patterns in pelagic taxa displaying different distributions and life-histories", Ph. D, pp.2006
- Hart DL, "Principles of Population Genetics", pp.1~71 (1997), Sinauer Associates Press
- Hwang GL, "Mitochondrial DNA analysis of the fleshy prawn(Penaeus chinensis)for stock discrimination in the Yellow Sea", Korean J Fish Aquat Sci, 30, pp.88~94 (1997)
- S N Jarman, "Genetic differentiation in the Antarctic coastal krill Euphausia crystallorophias", Heredity, 88(4), pp.280~287 (2002), Springer Science and Business Media LLC[DOI]
- Kim HS, "Ecological and physiological studies of Euphausiids in the Oyashio region, Western Subarctic Pacific", Ph. D., pp.2009
- 김정연, "한국 주변해역에 서식하는 살오징어(Todarodes pacificus)의 형태 및 유전학적 계군분석", 바다, 18(3), pp.131~141 (2013), 한국해양학회
- Motoo Kimura, "A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences", Journal of Molecular Evolution, 16(2), pp.111~120 (1980), Springer Science and Business Media LLC[DOI]
- John M. Kirkwood, "The developmental rate ofEuphausia crystallorophias larvae in Ellis Fjord, Vestfold Hills, Antarctica", Polar Biology, 16(7), pp.527~530 (1996), Springer Science and Business Media LLC[DOI]
- 이보람, "2016년 한국 근해 난바다곤쟁이류의 시·공간적 분포", 한국수산과학회지, 54(4), pp.456~466 (2021), 한국수산과학회[DOI]
- Mauchline J, "Advances in Marine Biology 7", pp.1~454 (1969), Academic Press
- 명세훈, "형태 및 분자 특징에 의한 한국산 꼼치(Liparis tanakae)의 집단 구조", 한국수산과학회지, 49(2), pp.198~207 (2016), 한국수산과학회
- Nico S, "Bioloy and Ecology of Antarctic Krill", pp.387~421 (2016), Springer
- Nopriawansyah Nopriawansyah, "Genetic variation among the geographic population of Cassava mealybug Phenacoccus manihoti (Hemiptera: Pseudococcidae) in Indonesia inferred from mitochondrial COI gene sequence", Biodiversitas Journal of Biological Diversity, 20(9), pp.2685~2692 (2019), UNS Solo[DOI]
- 오현주, "한국근해 해황과 클로로필 a 분포의 시공간적 변동 특성", 한국지리정보학회지, 9(3), pp.36~45 (2006), 한국지리정보학회
- C Papetti, "Genetic differentiation and local temporal stability of population structure in the euphausiid Meganyctiphanes norvegica", Marine Ecology Progress Series, 289, pp.225~235 (2005), Inter-Research Science Center[DOI]
- Tomaso Patarnello, "Genetics of Northern Krill (Meganyctiphanes norvegica Sars)", Advances in Marine Biology, 57, pp.41~57 (2010), Elsevier[DOI]
- 성용길, "대하 Fenneropenaeus chinensis 집단의 AFLP 지문에 의한 유전 다양성 및 변이", 한국양식학회지, 20(4), pp.255~259 (2007), 한국양식학회
- 서해립, "Stylocheiron abbreviatum (Euphausiacea, Crustacea): A New Record from the Korean Waters", Fisheries and Aquatic Sciences, 15(3), pp.255~257 (2012), 한국수산과학회
- Julie D. Thompson, "CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice", Nucleic Acids Research, 22(22), pp.4673~4680 (1994), Oxford University Press (OUP)[DOI]
- Carole Vallet, "Interannual variations in euphausiid life stage distribution in the Dumont d’Urville Sea from 2004 to 2008", Polar Science, 5(2), pp.166~178 (2011), Elsevier BV[DOI]
- Wright S, "The interpretation of population structure by Fstatistics with special regard to systems of mating", Evolution, 19, pp.395~420 (1965)