Poly(3-hydroxybutyrate) Degradation by Bacillus infantis sp. Isolated from Soil and Identification of phaZ and bdhA Expressing PHB Depolymerase
1
조회
0
다운로드
0
인용
0
참고문헌
키워드
초록
Poly(3-hydroxybutyrate) (PHB) is a biodegradable and biocompatible bioplastic. Effective PHB degradation in nutrient-poor environments is required for industrial and practical applications of PHB. To screen for PHB-degrading strains, PHB double-layer plates were prepared and three new Bacillus infantis species with PHB-degrading ability were isolated from the soil. In addition, phaZ and bdhA of all isolated B. infantis were confirmed using a Bacillus sp. universal primer set and established polymerase chain reaction conditions. To evaluate the effective PHB degradation ability under nutrient-deficient conditions, PHB film degradation was performed in mineral medium, resulting in a PHB degradation rate of 98.71% for B. infantis PD3, which was confirmed in 5 d. Physical changes in the degraded PHB films were analyzed. The decrease in molecular weight due to biodegradation was confirmed using gel permeation chromatography and surface erosion of the PHB film was observed using scanning electron microscopy. To the best of our knowledge, this is the first study on B. infantis showing its excellent PHB degradation ability and is expected to contribute to PHB commercialization and industrial composting.
Abstract
Poly(3-hydroxybutyrate) (PHB) is a biodegradable and biocompatible bioplastic. Effective PHB degradation in nutrient-poor environments is required for industrial and practical applications of PHB. To screen for PHB-degrading strains, PHB double-layer plates were prepared and three new Bacillus infantis species with PHB-degrading ability were isolated from the soil. In addition, phaZ and bdhA of all isolated B. infantis were confirmed using a Bacillus sp. universal primer set and established polymerase chain reaction conditions. To evaluate the effective PHB degradation ability under nutrient-deficient conditions, PHB film degradation was performed in mineral medium, resulting in a PHB degradation rate of 98.71% for B. infantis PD3, which was confirmed in 5 d. Physical changes in the degraded PHB films were analyzed. The decrease in molecular weight due to biodegradation was confirmed using gel permeation chromatography and surface erosion of the PHB film was observed using scanning electron microscopy. To the best of our knowledge, this is the first study on B. infantis showing its excellent PHB degradation ability and is expected to contribute to PHB commercialization and industrial composting.
참고문헌 (30)
- Thakur S, "Sustainability of bioplastics: opportunities and challenges", Curr. Opin. Green Sustain. Chem, 13, pp.68~75 (2018)
- MacLeod M, "The global threat from plastic pollution", Science, 373, pp.61~65 (2021)
- Brockhaus S, "A crossroads for bioplastics: exploring product developers' challenges to move beyond petroleum-based plastics", J. Clean Prod, 127, pp.84~95 (2016)
- Getachew A, "Production of biodegradable plastic by polyhydroxybutyrate (PHB) accumulating bacteria using low cost agricultural waste material", BMC Res. Notes, 9, pp.509~ (2016)
- Ren X, "Biodegradable plastics: a solution or a challenge?", J. Clean. Prod, 11, pp.27~40 (2003)
- Nandakumar A, "Bioplastics: a boon or bane?", Renew. Sust. Energ. Rev, 147, pp.111237~ (2021)
- Wang SL, "Biodegradation of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) plastic under anaerobic sludge and aerobic seawater conditions: gas evolution and microbial diversity", Environ. Sci. Technol, 52, pp.5700~5709 (2018)
- Park SL, "Improvement of polyhydroxybutyrate (PHB) plate-based screening method for PHB degrading bacteria using cell-grown amorphous PHB and recovered by sodium dodecyl sulfate (SDS)", Int. J. Biol. Macromol, 177, pp.413~421 (2021)
- Eggers J, "Poly(3-hydroxybutyrate) degradation in Ralstonia eutropha H16 is mediated stereoselectively to (S)-3-hydroxybutyryl coenzyme A (CoA) via crotonyl-coA", J. Bacteriol, 195, pp.3213~3223 (2013)
- Mergaert J, "Microbial degradation of poly(3-hydroxybutyrate) and poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in soils", Appl. Environ. Microbiol, 59, pp.3233~3238 (1993)
- Rao KB, "Biodecolourisation of azo dye reactive red 22 by Bacillus infantis strain AAA isolated from seawater and toxicity assessment of degraded metabolites", Nat. Environ. Pollut. Technol, 13, pp.369~ (2014)
- Abou-Zeid DM, "Degradation of natural and synthetic polyesters under anaerobic conditions", J. Biotechnol, 86, pp.113~126 (2001)
- D'Alessio M, "Transcriptome analysis of polyhydroxybutyrate cycle mutants reveals discrete loci connecting nitrogen utilization and carbon storage in Sinorhizobium meliloti", mSystems, 2, pp.e00035-17~ (2017)
- Song H, "Activities of key enzymes in the biosynthesis of poly-3-hydroxybutyrate by Methylosinus trichosporium IMV3011", Chinese J. Catal, 33, pp.1754~1761 (2012)
- Lu J, "3-Hydroxybutyrate oligomer hydrolase and 3-hydroxybutyrate dehydrogenase participate in intracellular polyhydroxybutyrate and polyhydroxyvalerate degradation in Paracoccus denitrificans", Appl. Environ. Microbiol, 80, pp.986~993 (2014)
- Brigham CJ, "Examination of PHB depolymerases in Ralstonia eutropha: further elucidation of the roles of enzymes in PHB homeostasis", AMB Express, 2, pp.26~ (2012)
- Martinez-Tobon DI, "Polyhydroxybutyrate (PHB) biodegradation using bacterial strains with demonstrated and predicted PHB depolymerase activity", Appl. Microbiol. Biotechnol, 102, pp.8049~8067 (2018)
- Teeraphatpornchai T, "Isolation and characterization of a bacterium that degrades various polyester-based biodegradable plastics", Biotechnol. Lett, 25, pp.23~28 (2003)
- Volova TG, "Biodegradation of polyhydroxyalkanoates (PHAs) in tropical coastal waters and identification of PHA-degrading bacteria", Polym. Degrad. Stabil, 95, pp.2350~2359 (2010)
- Cho JY, "Polyhydroxyalkanoates (PHAs) degradation by the newly isolated marine Bacillus sp. JY14", Chemosphere, 283, pp.131172~ (2021)
- Park Sol Lee, "Novel Polyhydroxybutyrate-Degrading Activity of the Microbulbifer Genus as Confirmed by Microbulbifer sp. SOL03 from the Marine Environment", Journal of Microbiology and Biotechnology, 32(1), pp.27~36 (2022), 한국미생물·생명공학회[DOI]
- Lee KM, "Fungal degradation of the bioplastic PHB (Poly-3-hydroxy-butyric acid) (vol 13, pg 213, 2005)", J. Polym. Environ, 14, pp.213~ (2006)
- Sei K, "Design of PCR primers and a gene probe for extensive detection of poly(3-hydroxybutyrate) (PHB)-degrading bacteria possessing fibronectin type III linker type-PHB depolymerases", Appl. Microbiol. Biotechnol, 55, pp.801~806 (2001)
- Wang Q, "Complete PHB mobilization in Escherichia coli enhances the stress tolerance: a potential biotechnological application", Microb. Cell Fact, 8(1), pp.1~9 (2009)
- Okon Y, "Poly-β-hydroxybutyrate metabolism in Azospirillum brasilense and the ecological role of PHB in the rhizosphere", FEMS Microbiol. Rev, 9, pp.131~139 (1992)
- Gadaleta G, "The influence of bio-plastics for food packaging on combined anaerobic digestion and composting treatment of organic municipal waste", Waste Manag, 144, pp.87~97 (2022)
- Kasuya K, "Adsorption kinetics of bacterial PHB depolymerase on the surface of polyhydroxyalkanoate films", Int. J. Biol. Macromol, 19, pp.35~40 (1996)
- Filiciotto L, "Biodegradable plastics: Standards, policies, and impacts", Chemsuschem, 14, pp.56~72 (2021)
- Ishii N, "Isolation and characterization of poly(butylene succinate)-degrading fungi", Polym. Degrad. Stab, 93, pp.883~888 (2008)
- Lee SH, "Isolation of bacteria degrading poly(butylene succinate-co-butylene adipate) and their lip A gene", Int. Biodeter. Biodegr, 64, pp.184~190 (2010)
