본문 바로가기
KERD
논문KCI 등재

Assembly and Function of Seed Endophytes in Response to Environmental Stress

2

조회

0

다운로드

0

인용

0

참고문헌

키워드

주제분류생물학

초록

Seeds are colonized by diverse microorganisms that can improve the growth and stress resistance of host plants. Although understanding the mechanisms of plant endophyte-host plant interactions is increasing, much of this knowledge does not come from seed endophytes, particularly under environmental stress that the plant host grows to face, including biotic (e.g., pathogens, herbivores and insects) and abiotic factors (e.g., drought, heavy metals and salt). In this article, we first provided a framework for the assembly and function of seed endophytes and discussed the sources and assembly process of seed endophytes. Following that, we reviewed the impact of environmental factors on the assembly of seed endophytes. Lastly, we explored recent advances in the growth promotion and stress resistance enhancement of plants, functioning by seed endophytes under various biotic and abiotic stressors.

Abstract

Seeds are colonized by diverse microorganisms that can improve the growth and stress resistance of host plants. Although understanding the mechanisms of plant endophyte-host plant interactions is increasing, much of this knowledge does not come from seed endophytes, particularly under environmental stress that the plant host grows to face, including biotic (e.g., pathogens, herbivores and insects) and abiotic factors (e.g., drought, heavy metals and salt). In this article, we first provided a framework for the assembly and function of seed endophytes and discussed the sources and assembly process of seed endophytes. Following that, we reviewed the impact of environmental factors on the assembly of seed endophytes. Lastly, we explored recent advances in the growth promotion and stress resistance enhancement of plants, functioning by seed endophytes under various biotic and abiotic stressors.

참고문헌 (112)

  1. Compant S, "Endophytes of grapevine flowers, berries, and seeds: identification of cultivable bacteria, comparison with other plant parts, and visualization of niches of colonization", Microb. Ecol, 62, pp.188~197 (2011)
  2. Gazis R, "Diversity of fungal endophytes in leaves and stems of wild rubber trees (Hevea brasiliensis) in Peru", Fugal Eol, 3, pp.240~254 (2010)
  3. Martínez-Arias C, "Stem endophytes increase root development, photosynthesis, and survival of elm plantlets (Ulmus minor Mill.)", J. Plant Physiol, 261, pp.153420~ (2021)
  4. Tian B, "Beneficial traits of bacterial endophytes belonging to the core communities of the tomato root microbiome", Agric. Ecosys. Environ, 247, pp.149~156 (2017)
  5. Nelson EB, "The seed microbiome: origins, interactions, and impacts", Plant Soil, 422, pp.7~34 (2018)
  6. Hodgson S, "Vertical transmission of fungal endophytes is widespread in forbs", Ecol. Evol, 4, pp.1199~1208 (2014)
  7. Kinge TR, "Endophytic seed mycobiome of six sorghum (Sorghum bicolor)cultivars from commercial seedlots using an Illumina sequencing approach", Mycosphere, 10, pp.739~756 (2019)
  8. Hardoim PR, "Properties of bacterial endophytes and their proposed role in plant growth", Trends Microbiol, 16, pp.463~471 (2008)
  9. Shade A, "Ecological patterns of seed microbiome diversity, transmission, and assembly", Curr. Opin. Microbiol, 37, pp.15~22 (2017)
  10. Zhang W, "The impact of endophyte infection, seed aging, and imbibition on selected sugar metabolite concentrations in seed", J. Agric. Food Chem, 67, pp.6921~6929 (2019)
  11. Truyens S, "Bacterial seed endophytes: genera, vertical transmission and interaction with plants", Environ. Microbiol. Rep, 7, pp.40~50 (2015)
  12. Vujanovic V, "Seed endosymbiosis: a vital relationship in providing prenatal care to plants", Can. J. Plant Sci, 97, pp.972~981 (2017)
  13. Guo J, "Diversity of endophytic bacteria and fungi in seeds of Elymus nutans growing in four locations of Qinghai Tibet Plateau, China", Plant Soil, 459, pp.49~63 (2021)
  14. Shahzad R, "Indoleacetic acid production and plant growth promoting potential of bacterial endophytes isolated from rice (Oryza sativa L.) seeds", Acta Biol. Hungarica, 68, pp.175~186 (2017)
  15. Samreen T, "Seed associated bacterial and fungal endophytes:diversity, life cycle, transmission, and application potential", Appl. Soil Ecol, 168, pp.104191~ (2021)
  16. Barret M, "Emergence shapes the structure of the seed microbiota", Appl. Environ. Microbiol, 81, pp.1257~1266 (2015)
  17. Laihonen M, "Epichloë endophyte-promoted seed pathogen increases host grass resistance against insect herbivory", Front. Microbiol, 12, pp.786619~ (2021)
  18. Ganley RJ, "Fungal endophytes in seeds and needles of Pinus monticola", Mycol. Res, 110, pp.318~327 (2006)
  19. Forte F, "Fungal endophyte colonization patterns alter over time in the novel association between Lolium perenne and Epichloë endophyte AR37", Front. Plant Sci, 11, pp.570026~ (2020)
  20. Lahiri A, "Assessing genotypic and environmental effects on endophyte communities of fraxinus (Ash) using culture dependent and Independent DNA sequencing", J. Fungi, 7, pp.565~ (2021)
  21. Thomas P, "Molecular profiling on surface-disinfected tomato seeds reveals high diversity of cultivation-recalcitrant endophytic bacteria with low shares of spore-forming firmicutes", Microb. Ecol, 79, pp.910~924 (2020)
  22. Bastías DA, "Epichloë fungal endophytes influence seed-associated bacterial communities", Front. Microbiol, 12, pp.795354~ (2021)
  23. Girsowicz R, "Bacterial seed endophyte community of annual plants modulated by plant photosynthetic pathways", Microbiol. Res, 223, pp.58~62 (2019)
  24. Abdelaal K, "The role of plant growth-promoting bacteria in alleviating the adverse effects of drought on plants", Biology (Basel), 10, pp.520~ (2021)
  25. Tenorio Berrío R, "Increasing yield on dry fields: molecular pathways with growing potential", Plant J, 109, pp.323~341 (2022)
  26. Misganaw G, "Endophytes of finger millet (Eleusine coracana) seeds", Symbiosis, 78, pp.203~213 (2019)
  27. Newman LA, "Bacteria and phytoremediation: new uses for endophytic bacteria in plants", Trends Biotechnol, 23, pp.6~8 (2005)
  28. Arenas-Lago D, "Cistus monspeliensis L. as a potential species for rehabilitation of soils with multielemental contamination under Mediterranean conditions", Environ. Sci. Poll. Res. Int, 25, pp.6443~6455 (2018)
  29. Gaiero JR, "Inside the root microbiome: bacterial root endophytes and plant growth promotion", Am. J. Bot, 100, pp.1738~1750 (2013)
  30. Vorholt JA, "Microbial life in the phyllosphere", Nat. Rev. Microbiol, 10, pp.828~840 (2012)
  31. Liu H, "Linking the phyllosphere microbiome to plant health", Trends Plant Sci, 25, pp.841~844 (2020)
  32. Franco C, "Sustainable agricultural crop production by endophytic actinobacteria", J. Biotechnol, 150, pp.S290~ (2010)
  33. Mei C, "A potential application of endophytic bacteria in strawberry production", Horticulturae, 7, pp.504~ (2021)
  34. Vandenkoornhuyse P, "The importance of the microbiome of the plant holobiont", New Phytol, 206, pp.1196~1206 (2015)
  35. Frank A, "Transmission of bacterial endophytes", Microorganisms, 5, pp.70~ (2017)
  36. Rudgers JA, "A fungus among us: broad patterns of endophyte distribution in the grasses", Ecology, 90, pp.1531~1539 (2009)
  37. Gagne-Bourgue F, "Isolation and characterization of indigenous endophytic bacteria associated with leaves of switchgrass (Panicum virgatum L.) cultivars", J. Appl. Microbiol, 114, pp.836~853 (2013)
  38. Ngugi HK, "Biology of flower-infecting fungi", Ann. Rev. Phytopathol, 44, pp.261~282 (2006)
  39. Perry DA, "Seedborne diseases and their control: principles and practice. by R. B. Maude. Wallingford, UK: CAB INTERNATIONAL (1996), pp. 280., £40.00. ISBN 0-85198-922-5", Exper. Agric, 33, pp.385~387 (1997)
  40. Shahzad R, "What is there in seeds? Vertically transmitted endophytic resources for sustainable improvement in plant growth", Front. Plant Sci, 9, pp.24~ (2018)
  41. Newcombe G, "A hypothetical bottleneck in the plant microbiome", Front. Microbiol, 9, pp.1645~ (2018)
  42. Aschehoug ET, "Fungal endophytes directly increase the competitive effects of an invasive forb", Ecology, 93, pp.3~8 (2012)
  43. Abdelfattah A, "From seed to seed: the role of microbial inheritance in the assembly of the plant microbiome", Trends Microbiol, 31, pp.346~355 (2023)
  44. Bergmann GE, "A metacommunity ecology approach to understanding microbial community assembly in developing plant seeds", Front. Microbiol, 13, pp.877519~ (2022)
  45. Fort T, "Maternal effects shape the seed mycobiome in Quercus petraea", New Phytol, 230, pp.1594~1608 (2021)
  46. Zhou J, "Stochastic community assembly: does it matter in microbial ecology?", Microbiol. Mol. Biol. Rev, 81, pp.e00002-17~ (2017)
  47. Kim H, "The single-seed microbiota reveals rare taxa-associated community robustness", Phytobiomes J (2023)[DOI]
  48. Chesneau G, , mBio, 13, pp.e0164822~ (2022)
  49. Kim H, "Longitudinal transmission of bacterial and fungal communities from seed to seed in rice", Commun. Biol, 5, pp.772~ (2022)
  50. Prado A, "Insect pollination: an ecological process involved in the assembly of the seed microbiota", Sci. Rep, 10, pp.3575~ (2020)
  51. Chesneau G, "Single seed microbiota: assembly and transmission from parent plant to seedling", mBio, 13, pp.e0164822~ (2022)
  52. Rezki S, "Assembly of seed-associated microbial communities within and across successive plant generations", Plant Soil, 422, pp.67~79 (2018)
  53. Cankar K, "Bacterial endophytes from seeds of Norway spruce (Picea abies L. Karst)", FEMS Microbiol. Lett, 244, pp.341~345 (2005)
  54. Mundt JO, "Bacteria within ovules and seeds", Appl. Environ. Microbiol, 32, pp.694~698 (1976)
  55. Truyens S, "Changes in the population of seed bacteria of transgenerationally Cdexposed Arabidopsis thaliana", Plant Biol, 15, pp.971~981 (2013)
  56. Truyens S, "The effect of long-term Cd and Ni exposure on seed endophytes of Agrostis capillaris and their potential application in phytoremediation of metal-contaminated soils", Int. J. Phytoremediation, 16, pp.643~659 (2014)
  57. Croes S, "Bacterial communities associated with Brassica napus L. grown on trace element-contaminated and non-contaminated fields: a genotypic and phenotypic comparison", Microb. Biotechnol, 6, pp.371~384 (2013)
  58. Walitang DI, "The influence of host genotype and salt stress on the seed endophytic community of salt-sensitive and salt-tolerant rice cultivars", BMC Plant Biol, 18, pp.51~ (2018)
  59. Bintarti AF, "Abiotic treatment to common bean plants results in an altered endophytic seed microbiome", Microbiol. Spectr, 10, pp.e0021021~ (2022)
  60. Hone H, "Profiling, isolation and characterisation of beneficial microbes from the seed microbiomes of drought tolerant wheat", Sci. Rep, 11, pp.11916~ (2021)
  61. Welty RE, "Influence of moisture-content, temperature, and length of storage on seed-germination and survival of endophytic fungi in seeds of tall fescue and perennial ryegrass", Phytopathology, 77, pp.893~900 (1987)
  62. Wijewardana C, "Drought stress has transgenerational effects on soybean seed germination and seedling vigor", PLoS One, 14, pp.e0214977~ (2019)
  63. Langeroudi AR, "How cover crop residue management and herbicide rate affect weed management and yield of tomato (Solanum lycopersicon L.) crop", Renew. Agric. Food Syst, 34, pp.1~9 (2018)
  64. van Esse HP, "Genetic modification to improve disease resistance in crops", New Phytol, 225, pp.70~86 (2020)
  65. Peixoto RS, "Harnessing the microbiome to prevent global biodiversity loss", Nat. Microbiol, 7, pp.1726~1735 (2022)
  66. Cohen A, "Participation of abscisic acid and gibberellins produced by endophytic Azospirillum in the alleviation of drought effects in maize", Bot, 87, pp.455~462 (2009)
  67. Waqas M, "Endophytic fungi produce gibberellins and indoleacetic acid and promotes host-plant growth during stress", Molecules, 17, pp.10754~10773 (2012)
  68. Diaz Herrera S, "Wheat seeds harbour bacterial endophytes with potential as plant growth promoters and biocontrol agents of Fusarium graminearum", Microbiol. Res, 186, pp.37~43 (2016)
  69. Shahzad R, "Seed-borne endophytic Bacillus amyloliquefaciens RWL-1 produces gibberellins and regulates endogenous phytohormones of Oryza sativa", Plant Physiol. Biochem, 106, pp.236~243 (2016)
  70. Qin Y, "Seed endophytic microbiota in a coastal plant and phytobeneficial properties of the fungus Cladosporium cladosporioides", Fungal Ecol, 24, pp.53~60 (2016)
  71. Khalaf EM, "Taxonomic and functional diversity of cultured seed associated microbes of the cucurbit family", BMC Microbiol, 16, pp.131~ (2016)
  72. Xu M, "Bacterial community compositions of tomato (Lycopersicum esculentum Mill.) seeds and plant growth promoting activity of ACC deaminase producing Bacillus subtilis (HYT-12-1) on tomato seedlings", World J. Microbiol. Biotechnol, 30, pp.835~845 (2014)
  73. Esther Puente M, "Rock-degrading endophytic bacteria in cacti", Environ. Exper. Bot, 66, pp.389~401 (2009)
  74. Walitang DI, "Characterizing endophytic competence and plant growth promotion of bacterial endophytes inhabiting the seed endosphere of rice", BMC Microbiol, 17, pp.209~ (2017)
  75. Shao J, "Rhizosphere microbiome assembly involves seed-borne bacteria in compensatory phosphate solubilization", Soil Biol. Biochem, 159, pp.108273~ (2021)
  76. de Voogd NJ, "Bacterial community composition and predicted functional ecology of sponges, sediment and seawater from the thousand islands reef complex, West Java, Indonesia", FEMS Microbiol, 91, pp.fiv019~ (2015)
  77. Sanchez-Lopez AS, "Community structure and diversity of endophytic bacteria in seeds of three consecutive generations of Crotalaria pumila growing on metal mine residues", Plant Soil, 422, pp.51~66 (2018)
  78. Matsumoto H, "Bacterial seed endophyte shapes disease resistance in rice", Nat. Plants, 7, pp.60~72 (2021)
  79. White JF, "Disease protection and allelopathic interactions of seed-transmitted endophytic pseudomonads of invasive reed grass (Phragmites australis)", Plant Soil, 422, pp.195~208 (2018)
  80. Yang F, "An endophytic strain of the genus Bacillus isolated from the seeds of maize (Zea mays L.) has antagonistic activity against maize pathogenic strains", Microb. Pathog, 142, pp.104074~ (2020)
  81. Kumar K, "Seed endophytic bacteria of pearl millet (Pennisetum glaucum L.) promote seedling development and defend against a fungal phytopathogen", Front. Microbiol, 12, pp.774293~ (2021)
  82. Pal G, "Seed inhabiting bacterial endophytes of maize promote seedling establishment and provide protection against fungal disease", Microbiol. Res, 255, pp.126926~ (2022)
  83. Ongena M, "Bacillus lipopeptides: versatile weapons for plant disease biocontrol", Trends Microbiol, 16, pp.115~125 (2008)
  84. Gao M, "Disease-induced changes in plant microbiome assembly and functional adaptation", Microbiome, 9, pp.187~ (2021)
  85. Verma SK, "Fungal disease prevention in seedlings of rice (Oryza sativa) and other grasses by growth-promoting seed-associated endophytic bacteria from invasive Phragmites australis", Microorganisms, 6, pp.21~ (2018)
  86. Verma SK, "Indigenous endophytic seed bacteria promote seedling development and defend against fungal disease in browntop millet (Urochloa ramosa L.)", J. Appl. Microbiol, 124, pp.764~778 (2018)
  87. Khalaf EM, "Bacterial seed endophytes of domesticated cucurbits antagonize fungal and oomycete pathogens including powdery mildew (Vol. 9, 42, 2018)", Front. Microbiol, 9, pp.42~ (2018)
  88. Melchior EA, "Effects of endophyte-infected tall fescue seed and red clover isoflavones on rumen microbial populations and physiological parameters of beef cattle", Transl. Anim. Sci, 3, pp.315~328 (2019)
  89. Finch S, "Mice find endophyte-infected seed of tall fescue unpalatable – implications for the aviation industry", Grass Forage Sci, 71 (2015)[DOI]
  90. Brem D, "Epichloë grass endophytes increase herbivore resistance in the woodland grass Brachypodium sylvaticum", Oecologia, 126, pp.522~530 (2001)
  91. Roane T, "Microorganisms and metal pollutants", 415~439 (2015)
  92. Liu D, "Transmission of human enteric pathogens from artificiallyinoculated flowers to vegetable sprouts", seedlings developed via contaminated seeds, 2018, pp.99, 21~27
  93. Wang J-l, "Unraveling the role of dark septate endophyte (DSE) colonizing maize (Zea mays) under cadmium stress: physiological, cytological and genic aspects", Sci. Rep, 6, pp.22028~ (2016)
  94. Parmar S, "Fungal seed endophyte FZT214 improves Dysphania ambrosioides Cd tolerance throughout different developmental Stages", Front. Microbiol, 12, pp.783475~ (2022)
  95. Zhang X, "Effects of cadmium stress on seed germination and seedling growth of Elymus dahuricus infected with the Neotyphodium endophyte", Sci. China Life Sci, 55, pp.793~799 (2012)
  96. Wan Y, "Effect of endophyte-infection on growth parameters and Cd-induced phytotoxicity of Cd-hyperaccumulator Solanum nigrum L", Chemosphere, 89, pp.743~750 (2012)
  97. Arenas-Lago D, "Influence of seed source and soil contamination on ecophysiological responses of Lavandula pedunculata in rehabilitation of mining areas", Plants (Basel, Switzerland), 11, pp.105~ (2021)
  98. Deng Z, "Characterization of heavy metal-resistant endophytic yeast Cryptococcus sp. CBSB78 from rapes (Brassica chinensis) and its potential in promoting the growth of Brassica spp. in metal-contaminated soils", Water Air Soil Pollut, 223, pp.5321~5329 (2012)
  99. Dai Y, "The differences and overlaps in the seed-resident microbiome of four Leguminous and three Gramineous forages", Microbiol. Biol, 13, pp.1461~1476 (2020)
  100. Ramalingam Radhakrishnan, "Endophytic Fungal Pre-treatments of Seeds Alleviates Salinity Stress Effects in Soybean Plants", The Journal of Microbiology, 51(6), pp.850~857 (2013), 한국미생물학회[DOI]
  101. Hubbard M, "Fungal endophytes improve wheat seed germination under heat and drought stress", Bot, 90, pp.137~149 (2012)
  102. Hubbard M, "Fungal endophytes enhance wheat heat and drought tolerance in terms of grain yield and second-generation seed viability", J. Appl. Microbiol, 116, pp.109~122 (2014)
  103. Jeong S, "Invasive Lactuca serriola seeds contain endophytic bacteria that contribute to drought tolerance", Sci. Rep, 11, pp.13307~ (2021)
  104. La Fua J, "Isolation of drought-tolerant endophyte bacteria from local tomato plants", Pak. J. Biol. Sci, 24, pp.1055~1062 (2021)
  105. Bailly C, "Impact of climate perturbations on seeds and seed quality for global agriculture", Biochem. J, 480, pp.177~196 (2023)
  106. Fernandez R, "Seed dormancy of Lolium perenne L. related to the maternal environment during seed filling", Seed Sci. Res, 31, pp.217~223 (2021)
  107. Huang Z, "The effect of temperature on reproduction in the summer and winter annual Arabidopsis thaliana ecotypes Bur and Cvi", Annal. Bot, 113, pp.921~929 (2014)
  108. Sloat LL, "Climate adaptation by crop migration", Nat. Commun, 11, pp.1243~ (2020)
  109. Di S, "Analysis of productivity and stability of synthetic microbial communities", J. R. Soc. Interface, 16, pp.20180859~ (2019)
  110. Pradhan S, "Combating biotic stresses in plants by synthetic microbial communities: principles, applications and challenges", J. Appl. Microbiol, 133, pp.2742~2759 (2022)
  111. Idbella M, "Contrasting effects of Rhizophagus irregularis versus bacterial and fungal seed endophytes on Trifolium repens plant-soil feedback", Mycorrhiza, 31, pp.103~115 (2021)
  112. Iannone LJ, "Seed-transmitted Epichloe sp. endophyte alleviates the negative effects of head smut of grasses (Ustilago bullata) on Bromus auleticus", Fungal Ecol, 29, pp.45~51 (2017)

이 간행물의 다른 논문 (14건)