Identification of a Novel De Novo Variant in the PAX3 Gene in Waardenburg Syndrome by Diagnostic Exome Sequencing: The First Molecular Diagnosis in Korea
0
조회
0
다운로드
3
인용
0
참고문헌
키워드
초록
Waardenburg syndrome (WS) is a clinically and genetically heterogeneous hereditary auditory pigmentary disorder characterized by congenital sensorineural hearing loss and iris discoloration. Many genes have been linked to WS, including PAX3, MITF, SNAI2, EDNRB, EDN3, and SOX10, and many additional genes have been associated with disorders with phenotypic overlap with WS. To screen all possible genes associated with WS and congenital deafness simultaneously, we performed diagnostic exome sequencing (DES) in a male patient with clinical features consistent with WS. Using DES, we identified a novel missense variant (c.220C>G; p.Arg74Gly) in exon 2 of the PAX3 gene in the patient. Further analysis by Sanger sequencing of the patient and his parents revealed a de novo occurrence of the variant. Our findings show that DES can be a useful tool for the identification of pathogenic gene variants in WS patients and for differentiation between WS and similar disorders. To the best of our knowledge, this is the first report of genetically confirmed WS in Korea.
Abstract
Waardenburg syndrome (WS) is a clinically and genetically heterogeneous hereditary auditory pigmentary disorder characterized by congenital sensorineural hearing loss and iris discoloration. Many genes have been linked to WS, including PAX3, MITF, SNAI2, EDNRB, EDN3, and SOX10, and many additional genes have been associated with disorders with phenotypic overlap with WS. To screen all possible genes associated with WS and congenital deafness simultaneously, we performed diagnostic exome sequencing (DES) in a male patient with clinical features consistent with WS. Using DES, we identified a novel missense variant (c.220C>G; p.Arg74Gly) in exon 2 of the PAX3 gene in the patient. Further analysis by Sanger sequencing of the patient and his parents revealed a de novo occurrence of the variant. Our findings show that DES can be a useful tool for the identification of pathogenic gene variants in WS patients and for differentiation between WS and similar disorders. To the best of our knowledge, this is the first report of genetically confirmed WS in Korea.
참고문헌 (14)
- Pingault V, "Review and update of mutations causing Waardenburg syndrome", Hum Mutat, 31, pp.391~406 (2010)
- Read AP, "Waardenburg syndrome", J Med Genet, 34, pp.656~665 (1997)
- Pardono E, "Waardenburg syndrome: clinical differentiation between types I and II", Am J Med Genet A, 117A, pp.223~235 (2003)
- Wildhardt G, "Spectrum of novel mutations found in Waardenburg syndrome types 1 and 2: implications for molecular genetic diagnostics", BMJ Open, 3, pp.e001917~ (2013)
- Farrer LA, "Waardenburg syndrome (WS) type I is caused by defects at multiple loci, one of which is near ALPP on chromosome 2: first report of the WS consortium", Am J Hum Genet, 50, pp.902~913 (1992)
- Ouyang XM, "The genetic bases for non-syndromic hearing loss among Chinese", J Hum Genet, 54, pp.131~140 (2009)
- Choi JH, "Three Cases of Waardenburg syndrome type 2 in a Korean family.", Korean J Ophthalmol, 18, pp.185~189 (2004)
- 기세영, "3형 와덴버그증후군", 대한안과학회지, 46(4), pp.726~730 (2005), 대한안과학회
- 이승찬, "동공부등을 동반한 2형 와덴버그증후군 1예", 대한안과학회지, 51(10), pp.1423~1426 (2010), 대한안과학회
- 심현찬, "4형 와덴버그증후군", 대한안과학회지, 54(1), pp.176~179 (2013), 대한안과학회
- Lohmann K, "Next generation sequencing and the future of genetic diagnosis", Neurotherapeutics, 11, pp.699~707 (2014)
- Gomez CM, "Clinical exome sequencing: the new standard in genetic diagnosis", JAMA Neurol, 71, pp.1215~1216 (2014)
- Strachan T, "PAX genes", Curr Opin Genet Dev, 4, pp.427~438 (1994)
- Matsunaga T, "Genetic analysis of PAX3 for diagnosis of Waardenburg syndrome type I", Acta Otolaryngol, 133, pp.345~351 (2013)
