Complete Mitochondrial Genome of Anoplocephala magna Solidifying the Species
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The 2 species of the genus Anoplocephala (Anoplocephalidae), A. perfoliata and A. magna, are among the most important equine cestode parasites. However, there is little information about their differences at the molecular level. The present study revealed that the mitochondrial (mt) genome of A. magna was 13,759 bp in size and 700 bp shorter than that of A. perfoliata. The 2 species includes 2 rRNA, 22 tRNA, and 12 protein-coding genes each. The size of each of the 36 genes was the same as that of A. perfoliata, except for cox1, rrnL, trnC, trnS2(UCN), trnG, trnH, trnQ, and trnP. In the full mitochondrial genome, the sequence similarity was 87.1%. The divergence in the nucleotide and amino acid sequences of individual protein-coding genes ranged from 11.1% to 16% and 6.8% to 16.4%, respectively. The 2 non-coding regions of the mt genome of A. magna were 199 bp and 271 bp in length, while the equivalent regions in A. perfoliata were 875 bp and 276 bp, respectively. The results of this study support the proposal that A. magna and A. perfoliata are separate species, consistent with previous morphological analyses.
Abstract
The 2 species of the genus Anoplocephala (Anoplocephalidae), A. perfoliata and A. magna, are among the most important equine cestode parasites. However, there is little information about their differences at the molecular level. The present study revealed that the mitochondrial (mt) genome of A. magna was 13,759 bp in size and 700 bp shorter than that of A. perfoliata. The 2 species includes 2 rRNA, 22 tRNA, and 12 protein-coding genes each. The size of each of the 36 genes was the same as that of A. perfoliata, except for cox1, rrnL, trnC, trnS2(UCN), trnG, trnH, trnQ, and trnP. In the full mitochondrial genome, the sequence similarity was 87.1%. The divergence in the nucleotide and amino acid sequences of individual protein-coding genes ranged from 11.1% to 16% and 6.8% to 16.4%, respectively. The 2 non-coding regions of the mt genome of A. magna were 199 bp and 271 bp in length, while the equivalent regions in A. perfoliata were 875 bp and 276 bp, respectively. The results of this study support the proposal that A. magna and A. perfoliata are separate species, consistent with previous morphological analyses.
참고문헌 (18)
- Bohorquez GA, "New multiplex PCR method for the simultaneous diagnosis of the three known species of equine tapeworm", Vet Parasitol, 207, pp.56~63 (2015)
- Jeon HK, "Complete sequence of the mitochondrial genome of Taenia saginata: comparison with T. solium and T. asiatica", Parasitol Int, 56, pp.243~246 (2007)
- Jia WZ, "Complete mitochondrial genomes of Taenia multiceps, T. hydatigena and T. pisiformis: additional molecular markers for a tapeworm genus of human and animal health significance", BMC Genomics, 11, pp.447~ (2010)
- Nakao M, "Molecular phylogeny of the genus Taenia (Cestoda: Taeniidae): proposals for the resurrection of Hydatigera Lamarck, 1816 and the creation of a new genus Versteria", Int J Parasitol, 43, pp.427~437 (2013)
- Littlewood DT, "The complete mitochondrial genomes of Schistosoma haematobium and Schistosoma spindale and the evolutionary history of mitochondrial genome changes among parasitic flatworms", Mol Phylogenet Evol, 39, pp.452~467 (2006)
- von Nickisch-Rosenegk M, "Complete sequence of the mitochondrial genome of the tapeworm Hymenolepis diminuta: gene arrangements indicate that Platyhelminths are Eutrochozoans", Mol Biol Evol, 18, pp.721~730 (2001)
- Guo A, "The complete mitochondrial genome of Anoplocephala perfoliata, the first representative for the family Anoplocephalidae", Parasit Vectors, 8, pp.549~ (2015)
- Huang X, "CAP3: a DNA sequence assembly program", Genome Res, 9, pp.868~877 (1999)
- Laslett D, "ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences", Bioinformatics, 24, pp.172~175 (2008)
- Yamasaki H, "Complete mitochondrial genomes of Diplogonoporus balaenopterae and Diplogonoporus grandis (Cestoda: Diphyllobothriidae) and clarification of their taxonomic relationships", Parasitol Int, 61, pp.260~266 (2012)
- Okimoto R, "Repeated sequence sets in mitochondrial DNA molecules of root knot nematodes (Meloidogyne): nucleotide sequences, genome location and potential for host-race identification", Nucleic Acids Res, 19, pp.1619~1626 (1991)
- Boore JL, "Animal mitochondrial genomes", Nucleic Acids Res, 27, pp.1767~1780 (1999)
- Wolstenholme DR, "Animal mitochondrial DNA: structure and evolution", Int Rev Cytol, 141, pp.173~216 (1992)
- Monnerot M, "Discrepancy in divergence of the mitochondrial and nuclear genomes of Drosophila teissieri and Drosophila yakuba", J Mol Evol, 30, pp.500~508 (1990)
- Nkouawa A, "Loop-mediated isothermal amplification method for differentiation and rapid detection of Taenia species", J Clin Microbiol, 47, pp.168~174 (2009)
- McManus DP, "Molecular discrimination of taeniid cestodes", Parasitol Int, 55(suppl), pp.S31~S37 (2006)
- Yamasaki H, "DNA differential diagnosis of taeniasis and cysticercosis by multiplex PCR", J Clin Microbiol, 42, pp.548~553 (2004)
- Gonzalez LM, "Differential diagnosis of Taenia saginata and Taenia saginata asiatica taeniasis through PCR", Diagn Microbiol Infect Dis, 49, pp.183~188 (2004)
