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Differentially Expressed Gene Profile of Acanthamoeba castellanii Induced by an Endosymbiont Legionella pneumophila

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Legionella pneumophila is an opportunistic pathogen that survives and proliferates within protists such as Acanthamoeba spp. in environment. However, intracellular pathogenic endosymbiosis and its implications within Acanthamoeba spp. remain poorly understood. In this study, RNA sequencing analysis was used to investigate transcriptional changes in A. castellanii in response to L. pneumophila infection. Based on RNA sequencing data, we identified 1,211 upregulated genes and 1,131 downregulated genes in A. castellanii infected with L. pneumophila for 12 hr. After 24 hr, 1,321 upregulated genes and 1,379 downregulated genes were identified. Gene ontology (GO) analysis revealed that L. pneumophila endosymbiosis enhanced hydrolase activity, catalytic activity, and DNA binding while reducing oxidoreductase activity in the molecular function (MF) domain. In particular, multiple genes associated with the GO term ‘integral component of membrane’ were downregulated during endosymbiosis. The endosymbiont also induced differential expression of various methyltransferases and acetyltransferases in A. castellanii. Findings herein are may significantly contribute to understanding endosymbiosis of L. pneumophila within A. castellanii.

Abstract

Legionella pneumophila is an opportunistic pathogen that survives and proliferates within protists such as Acanthamoeba spp. in environment. However, intracellular pathogenic endosymbiosis and its implications within Acanthamoeba spp. remain poorly understood. In this study, RNA sequencing analysis was used to investigate transcriptional changes in A. castellanii in response to L. pneumophila infection. Based on RNA sequencing data, we identified 1,211 upregulated genes and 1,131 downregulated genes in A. castellanii infected with L. pneumophila for 12 hr. After 24 hr, 1,321 upregulated genes and 1,379 downregulated genes were identified. Gene ontology (GO) analysis revealed that L. pneumophila endosymbiosis enhanced hydrolase activity, catalytic activity, and DNA binding while reducing oxidoreductase activity in the molecular function (MF) domain. In particular, multiple genes associated with the GO term ‘integral component of membrane’ were downregulated during endosymbiosis. The endosymbiont also induced differential expression of various methyltransferases and acetyltransferases in A. castellanii. Findings herein are may significantly contribute to understanding endosymbiosis of L. pneumophila within A. castellanii.

참고문헌 (20)

  1. Visvesvara GS, "Pathogenic and opportunistic free-living amoebae: Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, and Sappinia diploidea", FEMS Immunol Med Microbiol, 50, pp.1~26 (2007)[DOI]
  2. Schmitz-Esser S, "Diversity of bacterial endosymbionts of environmental Acanthamoeba isolates", Appl Environ Microbiol, 74, pp.5822~5831 (2008)[DOI]
  3. Greub G, "Microorganisms resistant to free-living amoebae", Clin Microbiol Rev, 17, pp.413~433 (2004)[DOI]
  4. Richards AM, "Cellular microbiology and molecular ecology of Legionella-amoeba interaction", Virulence, 4, pp.307~314 (2013)[DOI]
  5. Barker J, "Trojan horses of the microbial world: protozoa and the survival of bacterial pathogens in the environment", Microbiology, 140, pp.1253~1259 (1994)[DOI]
  6. Essig A, "Infection of Acanthamoeba castellanii by Chlamydia pneumoniae", Appl Environ Microbiol, 63, pp.1396~1399 (1997)[DOI]
  7. Guimaraes AJ, "Acanthamoeba spp. as a universal host for pathogenic microorganisms:One bridge from environment to host virulence", Microbiol Res, 193, pp.30~38 (2016)[DOI]
  8. . Isberg RR, "The Legionella pneumophila replication vacuole: making a cosy niche inside host cells", Nat Rev Microbiol, 7, pp.13~24 (2009)[DOI]
  9. Vogel JP, "Conjugative transfer by the virulence system of Legionella pneumophila", Science, 279, pp.873~876 (1998)[DOI]
  10. Bernhard Steiner, "Formation of the Legionella-containing vacuole: phosphoinositide conversion, GTPase modulation and ER dynamics", International Journal of Medical Microbiology, 308(1), pp.49~57 (2018), Elsevier BV[DOI]
  11. Christel Cazalet, "Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity", Nature Genetics, 36(11), pp.1165~1173 (2004), Springer Science and Business Media LLC[DOI]
  12. Cazalet C, "Analysis of the Legionella longbeachae genome and transcriptome uncovers unique strategies to cause Legionnaires' disease", PLoS Genet, 6, pp.e1000851~ (2010)[DOI]
  13. Molmeret M, "Disruption of the phagosomal membrane and egress of Legionella pneumophila into the cytoplasm during the last stages of intracellular infection of macrophages and Acanthamoeba polyphaga", Infect Immun, 72, pp.4040~4051 (2004)[DOI]
  14. Mou Q, "Differential expression of virulence genes in Legionella pneumophila growing in Acanthamoeba and human monocytes", Virulence, 9, pp.185~196 (2018)[DOI]
  15. Trapnell C, "TopHat: discovering splice junctions with RNA-Seq", Bioinformatics, 25, pp.1105~1111 (2009)[DOI]
  16. Quinlan AR, "BEDTools: a flexible suite of utilities for comparing genomic features", Bioinformatics, 26, pp.841~842 (2010)[DOI]
  17. Varet H, "SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data", PLoS One, 11, pp.e0157022~ (2016)[DOI]
  18. Gentleman RC, "Bioconductor: open software development for computational biology and bioinformatics", Genome Biol, 5, pp.R80~ (2004)
  19. Qiu J, "Legionella and Coxiella effectors: strength in diversity and activity", Nat Rev Microbiol, 15, pp.591~605 (2017)[DOI]
  20. Yen CY, "DNA methylation, histone acetylation and methylation of epigenetic modifications as a therapeutic approach for cancers", Cancer Lett, 373, pp.185~192 (2016)[DOI]

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