Whole mitochondrial genome sequence of an Indian Plasmodium falciparum field isolate
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Mitochondrial genome sequence of malaria parasites has served as a potential marker for inferring evolutionary history of the Plasmodium genus. In Plasmodium falciparum, the mitochondrial genome sequences from around the globe have provided important evolutionary understanding, but no Indian sequence has yet been utilized. We have sequenced the whole mitochondrial genome of a single P. falciparum field isolate from India using novel primers and compared with the 3D7 reference sequence and 1 previously reported Indian sequence. While the 2 Indian sequences were highly divergent from each other, the presently sequenced isolate was highly similar to the reference 3D7 strain.
Abstract
Mitochondrial genome sequence of malaria parasites has served as a potential marker for inferring evolutionary history of the Plasmodium genus. In Plasmodium falciparum, the mitochondrial genome sequences from around the globe have provided important evolutionary understanding, but no Indian sequence has yet been utilized. We have sequenced the whole mitochondrial genome of a single P. falciparum field isolate from India using novel primers and compared with the 3D7 reference sequence and 1 previously reported Indian sequence. While the 2 Indian sequences were highly divergent from each other, the presently sequenced isolate was highly similar to the reference 3D7 strain.
참고문헌 (17)
- World Malaria Report, "World Health Organization", 288~ (2012)
- Singh V, "Why is it important to study malaria epidemiology in India?", Trends Parasitol, 25, pp.452~457 (2009)
- Das A, "Genetic diversity and evolutionary history of Plasmodium falciparum and P. vivax", Curr Sci, 92, pp.1516~1524 (2007)
- Avise JC, "Pleistocene phylogeographic effects on avian populations and the speciation process", Proc R Soc Lond B, 265, pp.457~463 (1998)
- Brown WM, "Rapid evolution of animal mitochondrial DNA", Proc Natl Acad Sci USA, 76, pp.1967~1971 (1979)
- Creasey A, "Maternal inheritance of extra-chromosomal DNA in malaria parasites", Mol Biochem Parasitol, 65, pp.95~98 (1994)
- Elson JR, "Analysis of European mt DNAs for recombination", Am J Hum Genet, 68, pp.145~153 (2001)
- Feagin JE, "The Fragmented Mitochondrial Ribosomal RNAs of Plasmodium falciparum", PLoS ONE, 7, pp.e38320~ (2012)
- Krungkrai J, "The multiple roles of the mitochondrion of the malarial parasite", Parasitology, 129, pp.511~524 (2004)
- Vaidya AB, "Structural features of Plasmodium cytochrome b that may underlie susceptibility to 8-aminoquinolines and hydroxynaphthoquinones", Mol Biochem Parasitol, 58, pp.33~42 (1993)
- Joy DA, "Early origin and recent expansion of Plasmodium falciparum", Science, 300, pp.318~321 (2003)
- Sharma I, "Complete nucleotide sequence of the 6 kb element and conserved cytochrome b gene sequences among Indian isolates of Plasmodium falciparum", Int J Parasitol, 31, pp.1107~1113 (2001)
- Gupta B, "High proportion of mixed species Plasmodium infections in India revealed by PCR diagnostic assay", Trop Med Int Health, 15, pp.819~824 (2010)
- Tamura K, "MEGA5 : Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods", Mol Biol Evol, 28, pp.2731~2739 (2011)
- Prugnolle F, "African monkeys are infected by Plasmodium falciparum nonhuman primate-specific strains", Proc Natl Acad Sci USA, 108, pp.11948~11953 (2011)
- Duval L, "African apes as reservoirs of Plasmodium falciparum and the origin and diversification of the Laverania subgenus", Proc Natl Acad Sci USA, 107, pp.10561~10566 (2010)
- Hikosaka K, "Highly conserved gene arrangement of the mitochondrial genomes of 23 Plasmodium species", Parasitol Int, 60, pp.175~180 (2011)
