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메타게놈에서 발굴한 프로모터를 장착한 새로운 항시발현 벡터의 가치평가

Evaluation of Novel Constitutive Expression Vectors Equipped with Mined Promoters from Metagenome.

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초록

The choice of expression vector is very important for industrial production of proteins. Therefore, the systematic mining of promoters over a wider range of genetic resource and/or host is required. We previously reported a novel bidirectional reporting system(pBGR) for the isolation of promoters from metagenome and screened useful promoters that functioned constitutively in E. coli under general culture conditions. Among them, three promoter sequences including each upstream region were amplified by PCR and used to construct new expression vectors. To facilitate subcloning, a multi-cloning site was incorporated into the downstream region of the revere primer sequence. At these sites, GFP, esterase and β-glucosidase were subcloned and analyzed the constitutive expression ability of new promoter in terms of protein solubility and expression level. As a result, these vectors expressed the proteins constitutively to a level of 2~3% of the total cell protein in soluble fraction (>80 %). This study suggested that excavation of metagenomic promoters for construction of expression vector in a certain strain could provide a way for the development of the expression systems.

Abstract

The choice of expression vector is very important for industrial production of proteins. Therefore, the systematic mining of promoters over a wider range of genetic resource and/or host is required. We previously reported a novel bidirectional reporting system(pBGR) for the isolation of promoters from metagenome and screened useful promoters that functioned constitutively in E. coli under general culture conditions. Among them, three promoter sequences including each upstream region were amplified by PCR and used to construct new expression vectors. To facilitate subcloning, a multi-cloning site was incorporated into the downstream region of the revere primer sequence. At these sites, GFP, esterase and β-glucosidase were subcloned and analyzed the constitutive expression ability of new promoter in terms of protein solubility and expression level. As a result, these vectors expressed the proteins constitutively to a level of 2~3% of the total cell protein in soluble fraction (>80 %). This study suggested that excavation of metagenomic promoters for construction of expression vector in a certain strain could provide a way for the development of the expression systems.

참고문헌 (24)

  1. Aoki, T., "General properties of GFP-display, an electrophoretic analysis for single amino acid changes in target polypeptides", Anal. Biochem, 통권 : 317, pp.107~115 (2003)
  2. Baneyx, F., "Recombinant protein folding and misfolding in Escherichia coli", Nat. Biotechnol, 22, pp.1399~1408 (2004)
  3. Bhandari, P., "An Escherichia coli host strain useful for efficient overproduction of cloned gene products with NaCl as the inducer", J. Bacteriol, 통권 : 179, pp.4403~4406 (1997)
  4. Cardona, S. T., "An expression vector containing a rhamnose-inducible promoter provides tightly regulated gene expression in Burkholderia cenocepacia", Plasmid, 54, pp.219~228 (2005)
  5. Choi, G. S., "Construction and characterization of a recombinant esterase with high activity and enantio selectivity to (S)- ketoprofen ethyl ester", Protein. Expr. Purif, 29, pp.85~93 (2003)
  6. Chou, C. P., "Engineering cell physiology to enhance recombinant protein production in Escherichia coli", Appl. Microbiol. Biotechnol, 76, pp.521~532 (2007)
  7. Crameri, A., "Improved green fluorescent protein by molecular evolution using DNA shuffling", Nat. Biotechnol, 14, pp.315~319 (1996)
  8. Dubey, S. K., "Exploration of soil bacterial communities for their potential as bioresource", Biores. Technol, 97, pp.2217~2224 (2006)
  9. 한상수, "Screening of Promoters from Metagenomic DNA and Their Use for the Construction of Expression Vectors", Journal of Microbiology and Biotechnology, 18(10), pp.1634~1640 (2008), 한국미생물·생명공학회
  10. Handelsman, J, "Metagenomics: Application of genomics to uncultured microorganisms", Microbiol. Mol. Biol. Rev, 68, pp.669~685 (2004)
  11. Kim, J. H., "Enhanced thermostability and tolerance of high substrate concentration of an esterase by directed evolution", J. Mol. Catal. B Enzym, 27, pp.169~175 (2004)
  12. Kim, J. Y., "Mining, identification of a glucosidase family enzyme with high activity toward the plant extract indican. J. Mol. Catal. B Enzym. doi:10.1016", j.molcatb.2008.10.001, 2008
  13. 임재명, "Iron Chelator-Inducible Expression System for Escherichia coli", Journal of Microbiology and Biotechnology, 18(8), pp.1357~1363 (2008), 한국미생물·생명공학회
  14. Lorenz, P., "Metagenomics and industrial applications", Nat. Rev. Microbiol, 3, pp.510~516 (2005)
  15. Lorenz, P., "Metagenome - a challenging source of enzyme discovery", J. Mol. Catal. B Enzym, 19, pp.13~19 (2002)
  16. Mokhonova, E. I., "Forceful large-scale expression of “problematic” membrane proteins", Biochim. Biophys. Res. Comm, 통권 : 327, pp.650~655 (2005)
  17. Pace, N. R., "A molecular view of microbial diversity and the biosphere", Science, 통권 : 276, pp.734~740 (1997)
  18. Poo, H., "Novel high-level constitutive expression system, pHCE vector, for a convenient and cost-effective soluble production of human tumor necrosis factor-alpha", Biotechnol. Lett, 24, pp.1185~1189 (2002)
  19. Rud, I., "A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum", Microbiology, 통권 : 152, pp.1011~1019 (2006)
  20. Sambrook, J., "Molecular cloning : a laboratory manual, 3rd ed" (2001), Cold Spring Harbor Laboratory Press
  21. Streit, W. R., "Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms", Curr. Opin. Biotechnol, 15, pp.285~290 (2004)
  22. Ventura, S, "Protein quality in bacterial inclusion bodies", Trends Biotechnol, 24, pp.179~185 (2006)
  23. Voget, S., "Prospecting for novel biocatalysts in a soil metagenome", Appl. Environ. Microbiol, 69, pp.6235~6242 (2003)
  24. Vostiar, I., "Off-line monitoring of bacterial stress response during recombinant protein production using an optical biosensor", J. Biotechnol, 111, pp.191~201 (2004)

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