Identification, Expression and Preliminary Characterization of a Recombinant Bifunctional Enzyme of Photobacterium damselae subsp. piscicida with Glutamate Decarboxylase/Transaminase Activity

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참고문헌 (44)

1. Erlander MG, "The structural and functional heterogeneity of glutamic acid decarboxylase: a review", Neurochem. Res, 16, pp.215~226 (1991)
2. Jakobs C, "Inherited disorders of GABA metabolism", J. Inherit. Metab. Dis, 16, pp.704~715 (1993)
3. Ting Wong CG, "GABA, γ-hydroxybutyric acid, and neurological disease", Ann. Neurol, 54, pp.S3~S12 (2003)
4. Park KB, "Cloning, sequencing and expression of a novel glutamate decarboxylase gene from a newly isolated lactic acid bacterium, Lactobacillus brevis OPK-3", Bioresour. Technol, 98, pp.312~319 (2007)
5. Xu N, "Biotechnological advances and perspectives of gamma-aminobutyric acid production", World J. Microbiol. Biotechnol, 33, pp.1~11 (2017)
6. Foerster CW, "Glutamic acid decarboxylase in spores of Bacillus megaterium and its possible involvement in spore germination", J. Bacteriol, 114, pp.1090~1098 (1973)
7. Coleman ST, "Expression of a glutamate decarboxylase homologue is required for normal oxidative stress tolerance in Saccharomyces cerevisiae", J. Biol. Chem, 276, pp.244~250 (2001)
8. Kagan IA, "A validated method for gas chromatographic analysis of γ-aminobutyric acid in tall fescue herbage", J. Agric. Food Chem, 56, pp.5538~5543 (2008)
9. Shelp BJ, "Metabolism and functions of γ-aminobutyric acid", Trends Plant Sci, 4, pp.446~452 (1999)
10. Liao J, "γ-aminobutyric acid accumulation in tea (Camellia sinensis L.) through the GABA shunt and polyamine degradation pathways under anoxia", J. Agric. Food Chem, 65, pp.3013~3018 (2017)
11. 이강욱, "Characterization of a Glutamate Decarboxylase (GAD) from Enterococcus avium M5 Isolated from Jeotgal, a Korean Fermented Seafood", Journal of Microbiology and Biotechnology, 27(7), pp.1216~1222 (2017), 한국미생물·생명공학회[DOI]
12. De Biase D, "Isolation, overexpression, and biochemical characterization of the two isoforms of glutamic acid decarboxylase from Escherichia coli", Protein. Expr. Purif, 8, pp.430~438 (1996)
13. Cotter PD, "A glutamate decarboxylase system protects Listeria monocytogenes in gastric fluid", Mol. Microbiol, 40, pp.465~475 (2001)
14. Waterman SR, "Identification of the promoter regions and sigma(s)-dependent regulation of the gadA and gadBC genes associated with glutamate-dependent acid resistance in Shigella flexneri", FEMS Microbiol. Lett, 225, pp.155~160 (2003)
15. Capitani G, "Crystal structure and functional analysis of Escherichia coli glutamate decarboxylase", EMBO J, 22, pp.4027~4037 (2003)
16. Andreoni F, "Photobacteriosis: prevention and diagnosis", J. Immunol. Res, 2014, pp.793817~ (2014)
17. Balado M, "Genomic analysis of the marine fish pathogen Photobacterium damselae subsp. piscicida?: Insertion sequences proliferation is associated with chromosomal reorganisations and rampant gene decay", Infect. Genet. Evol, 54, pp.221~229 (2017)
18. Andreoni F, "Isolation of a novel gene from Photobacterium damselae subsp. piscicida and analysis of the recombinant antigen as promising vaccine candidate", Vaccine, 31, pp.820~826 (2013)
19. Delcher AL, "Identifying bacterial genes and endosymbiont DNA with Glimmer", Bioinformatics, 23, pp.673~679 (2007)
20. Lukashin AV, "GeneMark.hmm: new solutions for gene finding", Nucleic Acids Res, 26, pp.1107~1115 (1998)
21. Altschul SF, "Protein database searches using compositionally adjusted substitution matrices", FEBS J, 272, pp.5101~5109 (2005)
22. Marchler-Bauer A, "CDD: NCBI’s conserved domain database", Nucleic Acids Res, 43, pp.D222~D226 (2015)
23. Marchler-Bauer A, "CDD", SPARCLE: functional classification of proteins via subfamily domain architectures, 2017, pp.45, D00~D203
24. Laemmli UK, "Cleavage of structural proteins during the assembly of the head of bacteriophage T4", Nature, 227, pp.680~685 (1970)
25. Yang SY, "Characterization of a novel glutamate decarboxylase from Streptococcus salivarius ssp. thermophilus Y2", J. Chem. Technol. Biotechnol, 83, pp.855~861 (2008)
26. Schummer C, "Comparison of MTBSTFA and BSTFA in derivatization reactions of polar compounds prior to GC", MS analysis, 2009, pp.77, 1473~1482
27. Sobolevsky TG, "Comparison of silylation and esterification", acylation procedures in GC-MS analysis of amino acids, 2003, pp.26, 1474~1478
28. Wang Y, "Cn3D: sequence and structure views for Entrez", Trends Biochem. Sci, 25, pp.300~302 (2000)
29. John RA, "Pyridoxal phosphate-dependent enzymes", Biochim. Biophys. Acta, 1248, pp.81~96 (1995)
30. Hiraga K, "Glutamate decarboxylase from Lactobacillus brevis: activation by ammonium sulfate", Biosci. Biotechnol. Biochem, 72, pp.1299~1306 (2008)
31. Halket JM, "Derivatization in mass spectrometry—1. Silylation", Eur. J. Mass Spectrom, 9, pp.1~21 (2003)
32. Harris DC, "Quantitative chemical analysis", pp.565~594 (2010), W.H. Freeman and Company
33. Schummer C, "Analysis of tbutyldimethylsilyl derivatives of chlorophenols in the atmosphere of urban and rural areas in East of France", Chromatographia, 63, pp.189~195 (2006)
34. Ohie T, "Gas chromatography- mass spectrometry with tert.-butyldimethylsilyl derivatization: Use of the simplified sample preparations and the automated data system to screen for organic acidemias", J. Chromatogr. B Biomed. Sci. Appl, 746, pp.63~73 (2000)
35. Wang NC, "Enhanced transaminase activity of a bifunctional L-aspartate 4-decarboxylase", Biochem. Biophys. Res. Commun, 356, pp.368~373 (2007)
36. de Carvalho LPS, "On the chemical mechanism of succinic semialdehyde dehydrogenase (GabD1) from Mycobacterium tuberculosis", Arch. Biochem. Biophys, 509, pp.90~99 (2011)
37. Feehily C, "Functional γ-aminobutyrate shunt in Listeria monocytogenes: Role in acid tolerance and succinate biosynthesis", Appl. Environ. Microbiol, 79, pp.74~80 (2013)
38. Xiong W, "γ-aminobutyric acid shunt contributes to closing the tricarboxylic acid cycle in Synechocystis sp. PCC 6803", Mol. Microbiol, 93, pp.786~796 (2014)
39. Feehily C, "Role of glutamate metabolism in bacterial responses towards acid and other stresses", J. Appl. Microbiol, 114, pp.11~24 (2013)
40. Gibson KM, "Significant behavioral disturbances in succinic semialdehyde dehydrogenase (SSADH) deficiency (Gamma- Hydroxybutyric aciduria)", Biol. Psychiatry, 54, pp.763~768 (2003)
41. Shapiro N, "Straightforward radical organic chemistry in neat conditions and “on water", Green Chem, 12, pp.582~584 (2010)
42. Shapiro N, "Highly efficient organic reactions “on water”, “in water”, and both", Angew. Chemie - Int. Ed, 47, pp.2849~2852 (2008)
43. Vanoye L, "Insights in the aerobic oxidation of aldehydes", RSC Adv, 3, pp.18931~18937 (2013)
44. Buell CR, "The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000", Proc. Natl. Acad. Sci. USA, 100, pp.10181~10186 (2003)

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